Variation ID: Azucena_MH63RS3_DEL0507290

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
DEL
Os GJ-trop1: Azucena | AzucenaRS1
Os XI-adm: Minghui 63 | MH63RS3
Chr05
4541049
4544026
SV Length:
Query Start:
Query End:
Allele sv Count:
2986 bp
7462862
7465847
25
Gene_id Chromosome Start End
OsMH63_05G0111800 Chr05 7461935 7463374
OsMH63_05G0111900 Chr05 7465832 7468475
SV_id Chromosome ref_start ref_end query_start query_end length
Azucena_117534_DEL0507670 Chr05 4541049 4544026 7197681 7200663 2983
Azucena_125619_DEL0507580 Chr05 4541049 4544026 7159014 7161996 2983
Azucena_125827_DEL0507040 Chr05 4541049 4544026 7284939 7287924 2986
Azucena_127518_DEL0507310 Chr05 4541049 4544026 7378611 7381596 2986
Azucena_127652_DEL0507710 Chr05 4541049 4544026 7328677 7331661 2985
Azucena_132424_DEL0507340 Chr05 4541049 4544026 7309561 7312546 2986
Azucena_CN1_DEL0507110 Chr05 4541049 4544026 7301196 7304181 2986
Azucena_D62_DEL0506930 Chr05 4541049 4544026 7248954 7251939 2986
Azucena_FH838_DEL0507000 Chr05 4541049 4544026 7542819 7545804 2986
Azucena_FS32_DEL0506930 Chr05 4541049 4544026 7223626 7226611 2986
Azucena_G46_DEL0507120 Chr05 4541049 4544026 7242724 7245709 2986
Azucena_G630_DEL0505150 Chr05 4541049 4544026 7316665 7319649 2985
Azucena_HZ_DEL0506740 Chr05 4541049 4544026 7461844 7464829 2986
Azucena_J4155_DEL0506150 Chr05 4541049 4544026 7395303 7398288 2986
Azucena_J4155S_DEL0505990 Chr05 4541049 4544026 7503236 7506221 2986
Azucena_LK638S_DEL0507050 Chr05 4541049 4544026 7361135 7364120 2986
Azucena_R498_DEL0506540 Chr05 4541049 4544026 7626276 7629261 2986
Azucena_S548_DEL0507310 Chr05 4541049 4544026 7379687 7382672 2986
Azucena_Tumba_DEL0507280 Chr05 4541049 4544026 7616785 7619769 2985
Azucena_WSSM_DEL0506790 Chr05 4541049 4544026 7452265 7455226 2962
Azucena_XL628S_DEL0506910 Chr05 4541049 4544026 7351315 7354300 2986
Azucena_Y3551_DEL0506790 Chr05 4541049 4544026 7388934 7391919 2986
Azucena_YX1_DEL0506950 Chr05 4541049 4544026 7496119 7499104 2986
Azucena_ZS97RS3_DEL0507110 Chr05 4541049 4544026 7306332 7309317 2986
Azucena_MH63RS3_DEL0507290 Chr05 4541049 4544026 7462862 7465847 2986

>Azucena_MH63RS3_DEL0507290
TGTCACGCCCGGAATTTCTATCCAAAATTCCAAACGCTTACATGTGTGTGAACCCTCGTCCAGGAATCAGCCGAGGCACACAATAACAAATTGATAATAGAGTACAATTATTACTCTAATTAATAAGCGTATAAAATGTCATTACAGAGGTAGATAGTTCCTCTCAATCAATAAAGATCTAAGCAGCGGAAAATAAAATAAACGGCGCAAACGGCTCCACTCCATAGGCAGTTTGACCAGGGCTACACCTAATCCTCCACACCATCAGCTTCACTGTAGAACTCTTCCTCTGATGAATGATTGCAAGGTGAGTATATGATATACTCAGCAAGCCACGCAGCAAATATGCAAGTGCACAGGATAACAAAGGATGGCATAGTAGGGTTTCATTTGCAAAAGCAGCATTTAGCAAACATTTGAGAATTTAATAAAATAGTTAAGTAATTAAACAATATTAATCCAACGCTATACAACATACCCTGTTGTATAGGCCCAACCATTCTGAACAACCATCCCGGCTGCACAGTTCTATCTCCAAACCAGGAATATACCATTCCAAACCAGGAGCTAATCAAATTATTACCAATTAAAGCACCTTTTATTATGATGAGAAGGGTGAGACCAATCACGAAAGACATTGTTAGACCCGCCCATAACCGCGGGCACGGCTATTCGAATAGTTTTACTCTGATCAGAGGTGTACCACTGTACCCACAAGACACAACCCCACATCATGTCACCATGTGCCTCAATACCACCACGGTACCTCGGAAAGGAGTTGTGACAATACCCCTTGCATAACACAATCCACTGCAGCGCACCTTCCTGGATCATAATCACCCCCTTATAAACAAGGCATGGACTCCCCAGCGACCCCCGTGGGCTTATCTCCGCCACTTCTCAGTCTGGTGCCCCGCAATGAACCATGCTATACAAAAGATAAAGCCGTTGCCCACGCTGGCTTGTGGTTGGCACGGTTAATGTTTCACAACCGAAACTCGTGAACCGGTCCTTAATTGTCATGAGCACAACCATCAAAACCATGTGCTCACAACCCACCATTACCAGGTTTTAGTTGGCAAATAATTAATTAACAAATCACGATTGGCCATCGTGAACTATCATTAAGCCATCATTAAATTATAGTGATTCATAAGTTATCCCAATAGTGTGCTAATGTTTCTAAGCAGGGCTAAGCAATTATATCTAATACATCTAGTTGAACCAACATATAGAGCTCAACTAGTCAAGTTATAATAACCCAAGGTATCAAGGAATAAGGTAATCAAGAACAAAAGGGCTATAACAAACAATAGGTTAATTCCACCCAATGACATTCGAAAATAAATGCAATAGTTGAAAAGAAACAATAGCTTTAAATAGGATCAACATGCTCAAAGGGTTGTTTGGGATCTGTGTGACTTGCCTTGCTGGCCTTGGAACTCTTCAAACTCTTCTCCGGCGAAAACGGACTCTCCGGAAACGACGGAATCTAAGCAGAAAGAAGCAAAATCACCAAAACAGCACATAAACAAGCATGAACAGTACATGTGGATATTTTTAACATGTAGATCTCAATTTTAGAAAAATTTAGAGACTTAAACCAACTAAATCGGAGCTAAGATGAATTAGTTATGAATTTTTAAAAGATTAAATCGGATTAAAACACTTAAATTGATTTTGATTGAATTATGACGCAATAATGAATTATTTTTGAAAAGGAAAAGAGGATTTATTGCGTCAGCGGCTAGGGTTTCGGTGGACCGGACGCACGGGCGACGGCTCACGCGAACGGACGGCCGAGATCGACTTGATCCAAAACGGACGGCCGAGATCGAACGGTCCACGACCGGCTCACAGCGAACGGCCCCGATGACGTCGGCGATGACGTCACCACCGGCGGCGGCGGCTCGGGCTTGCATGCTCGCCGGCGAACGACGGCACGGCGGCGCGAACGGAAGGCACCAACAGGTAGAGCGCAATGCGGCGAACTCACCGGTGACCAAAAGAGCGGCGGAAGATCAACAGACGGCGACGGCGACGAGGAGGAAGCGGCGGCAAACTTCGGGTCGACGGCGGCGACGGTGCTCCGGCGGTCTTCGGCGGCGGCGAAGGAGCGGACGAGAACGGCGGCAACTTGGCGATCACGACGGTGGCCTTGCCGAGCGATGATGACGACCGAGACGGCGGCGGCGCACGGCTGGAGCGACGGCTACGACGGCGGCGCTAGGTTGCACGGCGCTAGAACTCTTCCGGCGACGAGAGGCGAAGGCGAAGGTGGCGACGGGTAGAGGAGACACCGGGGAACCTTTTAAAGGGGCTCGGAGGCGACGGCGAAGGCCCACGGCGACTGGCGACGAGAAGGAAGGTTTAGGGTTCGGAGGAGAGAGACGAATCCGATTCGAACTCGATTCCAACGATTTCCAAAACGAATTAGCCGATGTTTCCAAAAGAGAAAAGGTAGAGGAAATCCCGGAGATTGTTTCCCCTCTATCAATTCGGCCGGAAACGGAAAGGATCGATCGAATTTGGAAGGGAACGGCGGCGGCGCGAAACTAGGGTTTCGGGCGGCGGCGGCCGGAGATTGACGACGACCCTGACAGGTGGGCCCCACCTGTCAGCGGGCGGATGCGCGCGCGCGCGGCGGCGGACTGGGCCGGACTGGGCCGAGGAGAGAGAGAGAGCGGTTTTGGGCCGACTTTCGGCCCAAAGCCAAAAGAGACTTTTTAAAACCTTTTTCAATTTAAATTATTCATGAAATGCAATTCCATTTATTAAAAATACTTCCTTAGCTCAAATAAATCCCAGAAAAATCTAGGAATTATAGAATTAAGCAAAGTATTTAATGAAATTTTATCTGGCCCCATTTTATATTGGAATTTATTAATTAAAAAATTAGATCTTCTCTTCAAGACTTTTAAAATTATTTCTAAAAATTCCAATTAAACAACCATTTATATATTTTGAATTTTTAGGGTGTGACAAA

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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