Variation ID: D62_MH63RS3_DEL0509670

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
DEL
Os XI-1A: D62 | D62
Os XI-adm: Minghui 63 | MH63RS3
Chr05
15800515
15803518
SV Length:
Query Start:
Query End:
Allele sv Count:
2982 bp
7462864
7465845
33
Gene_id Chromosome Start End
OsMH63_05G0111800 Chr05 7461935 7463374
OsMH63_05G0111900 Chr05 7465832 7468475
SV_id Chromosome ref_start ref_end query_start query_end length
D62_02428_DEL0513060 Chr05 15800515 15803518 10389220 10392213 2994
D62_117425_DEL0518270 Chr05 15800515 15803518 10573233 10576227 2995
D62_125619_DEL0512900 Chr05 15800515 15803518 7159016 7161994 2979
D62_127518_DEL0511170 Chr05 15800515 15803518 7378613 7381594 2982
D62_127564_DEL0510740 Chr05 15800515 15803518 16549256 16552246 2991
D62_127742_DEL0510120 Chr05 15800515 15800953 14773883 14774316 434
D62_128077_DEL0518300 Chr05 15800515 15803518 10381348 10384342 2995
D62_132278_DEL0518010 Chr05 15800515 15803518 10348286 10351280 2995
D62_Azucena_DEL0518570 Chr05 15800515 15803518 10859007 10862001 2995
D62_CN1_DEL0507310 Chr05 15800515 15803518 7301198 7304179 2982
D62_DHX2_DEL0518090 Chr05 15800515 15803518 10400284 10403278 2995
D62_FH838_DEL0508510 Chr05 15800515 15803518 7542821 7545802 2982
D62_FS32_DEL0507110 Chr05 15800515 15803518 7223628 7226609 2982
D62_G46_DEL0508350 Chr05 15800515 15803518 7242726 7245707 2982
D62_G630_DEL0513050 Chr05 15800515 15803518 16906273 16909249 2977
D62_II32_DEL0507350 Chr05 15800515 15800953 26333123 26333551 429
D62_IR64_DEL0513930 Chr05 15800515 15800953 26385668 26386096 429
D62_J4155_DEL0508280 Chr05 15800515 15803518 7395305 7398286 2982
D62_KY131_DEL0519190 Chr05 15800515 15803518 10548094 10551087 2994
D62_Lemont_DEL0517930 Chr05 15800515 15803518 16722462 16725452 2991
D62_LJ_DEL0518650 Chr05 15800515 15803518 10602613 10605607 2995
D62_LK638S_DEL0506340 Chr05 15800515 15803518 7361137 7364118 2982
D62_NamRoo_DEL0517900 Chr05 15800515 15803518 10768032 10771025 2994
D62_Nipponbare_DEL0518020 Chr05 15800515 15803518 10472549 10475543 2995
D62_R498_DEL0511550 Chr05 15800515 15803518 7626278 7629259 2982
D62_Tumba_DEL0512870 Chr05 15800515 15803518 7616787 7619767 2981
D62_XL628S_DEL0506310 Chr05 15800515 15803518 7351317 7354298 2982
D62_Y3551_DEL0507130 Chr05 15800515 15803518 7388936 7391917 2982
D62_Y58S_DEL0512370 Chr05 15800515 15803518 16182208 16185198 2991
D62_YX1_DEL0508760 Chr05 15800515 15803518 7496121 7499102 2982
D62_ZH11_DEL0517900 Chr05 15800515 15803518 10503530 10506524 2995
D62_ZS97RS3_DEL0508310 Chr05 15800515 15803518 7306334 7309315 2982
D62_MH63RS3_DEL0509670 Chr05 15800515 15803518 7462864 7465845 2982

>D62_MH63RS3_DEL0509670
TCACGCCCGGAATTTCTATCCAAAATTCCAAACGCTTACATGTGTGTGAACCCTCGTCCAGGAATCAGCCGAGGCACACAATAACAAATTGATAATAGAGTACAATTATTACTCTAATTAATAAGCGTATAAAATGTCATTACAGAGGTAGATAGTTCCTCTCAATCAATAAAGATCTAAGCAGCGGAAAATAAAATAAACGGCGCAAACGGCTCCACTCCATAGGCAGTTTGACCAGGGCTACACCTAATCCTCCACACCATCAGCTTCACTGTAGAACTCTTCCTCTGATGAATGATTGCAAGGTGAGTATATGATATACTCAGCAAGCCACGCAGCAAATATGCAAGTGCACAGGATAACAAAGGATGGCATAGTAGGGTTTCATTTGCAAAAGCAGCATTTAGCAAACATTTGAGAATTTAATAAAATAGTTAAGTAATTAAACAATATTAATCCAACGCTATACAACATACCCTGTTGTATAGGCCCAACCATTCTGAACAACCATCCCGGCTGCACAGTTCTATCTCCAAACCAGGAATATACCATTCCAAACCAGGAGCTAATCAAATTATTACCAATTAAAGCACCTTTTATTATGATGAGAAGGGTGAGACCAATCACGAAAGACATTGTTAGACCCGCCCATAACCGCGGGCACGGCTATTCGAATAGTTTTACTCTGATCAGAGGTGTACCACTGTACCCACAAGACACAACCCCACATCATGTCACCATGTGCCTCAATACCACCACGGTACCTCGGAAAGGAGTTGTGACAATACCCCTTGCATAACACAATCCACTGCAGCGCACCTTCCTGGATCATAATCACCCCCTTATAAACAAGGCATGGACTCCCCAGCGACCCCCGTGGGCTTATCTCCGCCACTTCTCAGTCTGGTGCCCCGCAATGAACCATGCTATACAAAAGATAAAGCCGTTGCCCACGCTGGCTTGTGGTTGGCACGGTTAATGTTTCACAACCGAAACTCGTGAACCGGTCCTTAATTGTCATGAGCACAACCATCAAAACCATGTGCTCACAACCCACCATTACCAGGTTTTAGTTGGCAAATAATTAATTAACAAATCACGATTGGCCATCGTGAACTATCATTAAGCCATCATTAAATTATAGTGATTCATAAGTTATCCCAATAGTGTGCTAATGTTTCTAAGCAGGGCTAAGCAATTATATCTAATACATCTAGTTGAACCAACATATAGAGCTCAACTAGTCAAGTTATAATAACCCAAGGTATCAAGGAATAAGGTAATCAAGAACAAAAGGGCTATAACAAACAATAGGTTAATTCCACCCAATGACATTCGAAAATAAATGCAATAGTTGAAAAGAAACAATAGCTTTAAATAGGATCAACATGCTCAAAGGGTTGTTTGGGATCTGTGTGACTTGCCTTGCTGGCCTTGGAACTCTTCAAACTCTTCTCCGGCGAAAACGGACTCTCCGGAAACGACGGAATCTAAGCAGAAAGAAGCAAAATCACCAAAACAGCACATAAACAAGCATGAACAGTACATGTGGATATTTTTAACATGTAGATCTCAATTTTAGAAAAATTTAGAGACTTAAACCAACTAAATCGGAGCTAAGATGAATTAGTTATGAATTTTTAAAAGATTAAATCGGATTAAAACACTTAAATTGATTTTGATTGAATTATGACGCAATAATGAATTATTTTTGAAAAGGAAAAGAGGATTTATTGCGTCAGCGGCTAGGGTTTCGGTGGACCGGACGCACGGGCGACGGCTCACGCGAACGGACGGCCGAGATCGACTTGATCCAAAACGGACGGCCGAGATCGAACGGTCCACGACCGGCTCACAGCGAACGGCCCCGATGACGTCGGCGATGACGTCACCACCGGCGGCGGCGGCTCGGGCTTGCATGCTCGCCGGCGAACGACGGCACGGCGGCGCGAACGGAAGGCACCAACAGGTAGAGCGCAATGCGGCGAACTCACCGGTGACCAAAAGAGCGGCGGAAGATCAACAGACGGCGACGGCGACGAGGAGGAAGCGGCGGCAAACTTCGGGTCGACGGCGGCGACGGTGCTCCGGCGGTCTTCGGCGGCGGCGAAGGAGCGGACGAGAACGGCGGCAACTTGGCGATCACGACGGTGGCCTTGCCGAGCGATGATGACGACCGAGACGGCGGCGGCGCACGGCTGGAGCGACGGCTACGACGGCGGCGCTAGGTTGCACGGCGCTAGAACTCTTCCGGCGACGAGAGGCGAAGGCGAAGGTGGCGACGGGTAGAGGAGACACCGGGGAACCTTTTAAAGGGGCTCGGAGGCGACGGCGAAGGCCCACGGCGACTGGCGACGAGAAGGAAGGTTTAGGGTTCGGAGGAGAGAGACGAATCCGATTCGAACTCGATTCCAACGATTTCCAAAACGAATTAGCCGATGTTTCCAAAAGAGAAAAGGTAGAGGAAATCCCGGAGATTGTTTCCCCTCTATCAATTCGGCCGGAAACGGAAAGGATCGATCGAATTTGGAAGGGAACGGCGGCGGCGCGAAACTAGGGTTTCGGGCGGCGGCGGCCGGAGATTGACGACGACCCTGACAGGTGGGCCCCACCTGTCAGCGGGCGGATGCGCGCGCGCGCGGCGGCGGACTGGGCCGGACTGGGCCGAGGAGAGAGAGAGAGCGGTTTTGGGCCGACTTTCGGCCCAAAGCCAAAAGAGACTTTTTAAAACCTTTTTCAATTTAAATTATTCATGAAATGCAATTCCATTTATTAAAAATACTTCCTTAGCTCAAATAAATCCCAGAAAAATCTAGGAATTATAGAATTAAGCAAAGTATTTAATGAAATTTTATCTGGCCCCATTTTATATTGGAATTTATTAATTAAAAAATTAGATCTTCTCTTCAAGACTTTTAAAATTATTTCTAAAAATTCCAATTAAACAACCATTTATATATTTTGAATTTTTAGGGTGTGACA

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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