Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_04g0026990 | OGI:04092930 | 50/50 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr04:33728992-33757141 | ||||||||
| Gene Symbol | RGAc | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | 125619_125827_DEL0440490,125619_125827_DEL0440530,125619_125827_INS0439490,125619_125827_INS0428300,125619_125827_INS0436790,R498_125827_INS0433490,R498_125827_INS0433020,MH63RS3_125827_INS0430850,MH63RS3_125827_INS0430450,127564_125827_DEL0434630,127564_125827_DEL0434670,127564_125827_INS0431970,127564_125827_INS0434680,127564_125827_INS0431460,127564_125827_INS0431750,127564_125827_TRA0433650,128077_125827_INS0446040,128077_125827_INS0432740,128077_125827_DEL0444110_1,CN1_125827_INS0432140,CN1_125827_INS0438220,CN1_125827_INS0428210,CN1_125827_INS0430230,LK638S_125827_DEL0434470,LK638S_125827_INS0432860,LK638S_125827_INS0432650,LK638S_125827_DEL0435110,127742_125827_OTH0435240,127742_125827_INS0432000,127742_125827_INS0432760,127742_125827_INS0435280,127742_125827_INS0432260,R9311_125827_DEL0432380,R9311_125827_INS0430200,R9311_125827_INS0432430,R9311_125827_INS0429600,R9311_125827_INS0429810,R527_125827_INS0434370,R527_125827_INS0433850,WSSM_125827_OTH0434160,WSSM_125827_INS0430990,WSSM_125827_INS0434190,WSSM_125827_INS0436970,WSSM_125827_INS0427110,WSSM_125827_INS0429180,Kosh_125827_INS0453100,Kosh_125827_INS0460950,Kosh_125827_INS0455830,Kosh_125827_INS0456210,Kosh_125827_TRA0458740,XL628S_125827_DEL0433770,XL628S_125827_INS0431880,XL628S_125827_INS0431450,XL628S_125827_DEL0434420,127518_125827_DEL0438970,127518_125827_DEL0439010,127518_125827_INS0435620,127518_125827_INS0435990,127652_125827_DEL0452110,127652_125827_DEL0400460,127652_125827_INS0445100,127652_125827_INS0448800,127652_125827_DEL0452180,127652_125827_DEL0402230,127652_125827_DEL0402290,127652_125827_INS0452920,127652_125827_INS0432660,127652_125827_INS0447430_1,G630_125827_INS0437060,G630_125827_INS0436560,FH838_125827_INS0439950,FH838_125827_INS0439410,LJ_125827_DEL0456100,LJ_125827_DEL0456140,LJ_125827_DEL0456180,LJ_125827_OTH0454070,LJ_125827_INS0451120,LJ_125827_TRA0454060,J4155S_125827_DEL0453640,J4155S_125827_OTH0453650,J4155S_125827_INS0457430,J4155S_125827_INS0448850,J4155S_125827_INS0449130,117534_125827_INS0400710_1,117534_125827_TRA0447610,117534_125827_OTH0448560,117534_125827_OTH0450710,117534_125827_INS0435200,117534_125827_TRA0448550,OglaRS2_125827_INS0444420,OglaRS2_125827_INS0459160,OglaRS2_125827_INS0457030,OglaRS2_125827_INS0403160,OglaRS2_125827_INS0449440_1,II32_125827_DEL0434220,II32_125827_INS0437170,II32_125827_INS0432180,II32_125827_DEL0434680,J4155_125827_INS0445110,J4155_125827_DEL0449840,J4155_125827_OTH0449850,J4155_125827_INS0453320,J4155_125827_INS0440540,J4155_125827_INS0445400,J4155_125827_TRA0448510,Y58S_125827_TRA0434440,Y58S_125827_DEL0443210,Y58S_125827_OTH0443220,Y58S_125827_INS0436280,Y58S_125827_INS0438390,Y58S_125827_INS0438700,Y58S_125827_TRA0441660,Y3551_125827_OTH0434060,Y3551_125827_INS0431460,Y3551_125827_INS0434090,Y3551_125827_INS0430780,Y3551_125827_INS0431030,FS32_125827_INS0431910,FS32_125827_INS0425350,FS32_125827_DEL0425420,FS32_125827_INS0436210,Tumba_125827_DEL0438250,Tumba_125827_INS0435700,Tumba_125827_INS0435490,132278_125827_DEL0456320,132278_125827_DEL0456360,132278_125827_INS0451130,132278_125827_DEL0456400,132278_125827_INS0448380,132278_125827_INS0440520,132278_125827_INS0451420,132278_125827_TRA0454110,Nipponbare_125827_INS0453110,Nipponbare_125827_INS0450420,Nipponbare_125827_INS0458140,Nipponbare_125827_INS0443780,Nipponbare_125827_INS0453460,Nipponbare_125827_TRA0456010,117425_125827_DEL0450050,117425_125827_INS0445090,117425_125827_DEL0450110,117425_125827_INS0434910,117425_125827_DEL0448340_1,Basmati1_125827_DEL0451350,Basmati1_125827_INS0446750,Basmati1_125827_DEL0451430,Basmati1_125827_INS0452150,Basmati1_125827_INS0436840,Basmati1_125827_DEL0449710_1,TM_125827_DEL0432070,TM_125827_INS0422770,TM_125827_INS0430610,TM_125827_DEL0432110,TM_125827_INS0429990,TM_125827_INS0422420,TM_125827_INS0422470,TM_125827_INS0429510,S548_125827_OTH0436900,S548_125827_INS0433570,S548_125827_INS0434310,S548_125827_INS0436930,S548_125827_INS0426090,S548_125827_INS0433820,132424_125827_DEL0444880,132424_125827_DEL0444920,132424_125827_INS0445810,132424_125827_INS0444930,132424_125827_INS0447650,132424_125827_INS0402320,132424_125827_INS0440630,HZ_125827_OTH0436400,HZ_125827_INS0432980,HZ_125827_INS0433740,HZ_125827_INS0436430,HZ_125827_INS0425780,HZ_125827_INS0433270,NamRoo_125827_DEL0459220,NamRoo_125827_OTH0457090,NamRoo_125827_TRA0457080,KY131_125827_INS0453090,KY131_125827_INS0450320,KY131_125827_INS0458030,KY131_125827_INS0443110,KY131_125827_DEL0460410,IR64_125827_INS0431740,IR64_125827_INS0431130,02428_125827_OTH0460560,02428_125827_INS0454940,02428_125827_DEL0458110_1,ZS97RS3_125827_DEL0433560,ZS97RS3_125827_INS0431910,ZS97RS3_125827_INS0431500,ZS97RS3_125827_DEL0434020,G46_125827_DEL0433790,G46_125827_INS0431390,G46_125827_INS0431010,ZH11_125827_INS0444500,ZH11_125827_INS0454560,ZH11_125827_INS0451790,ZH11_125827_INS0459380,ZH11_125827_INS0444510,ZH11_125827_INS0454930,YX1_125827_DEL0432830,YX1_125827_INS0429640,YX1_125827_INS0432880,YX1_125827_DEL0435780,YX1_125827_INS0422600,YX1_125827_INS0429960,G8_125827_OTH0434100,G8_125827_INS0431700,G8_125827_INS0434130,G8_125827_INS0430910,G8_125827_INS0431160,D62_125827_DEL0432400,D62_125827_INS0430060,D62_125827_INS0430720,D62_125827_INS0432450,D62_125827_INS0425020,D62_125827_INS0430340,DG_125827_OTH0431170,DG_125827_INS0429290,DG_125827_INS0431200,DG_125827_INS0428580,DG_125827_INS0428890,Azucena_125827_DEL0451310,Azucena_125827_DEL0451350,Azucena_125827_INS0446270,Azucena_125827_DEL0451390,Azucena_125827_INS0436270,Azucena_125827_DEL0449420_1,Lemont_125827_OTH0453300,Lemont_125827_TRA0443240,Lemont_125827_OTH0451240,Lemont_125827_INS0453360,Lemont_125827_TRA0451220,DHX2_125827_INS0444300,DHX2_125827_INS0458270,DHX2_125827_INS0443700,DHX2_125827_DEL0456290_1,
More
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| DNA seq | atgggacttccaccgtcgttgaggggattatctttacgtggttgcagcgacgaactaagtatgcagtgcagaatggcagcaacggagaagctacaggtctggattgatggcaaaattattgattaatcacttgaggtatcgctacaggggttaaagagggaggtaggcagcaagaaggcggtcaccagcggaaaggaatgggtgcattctgtcttgagaactactccacttgataccctcagcctcctcttgcttaaagtaattaattgatcttcctgaagagtgcagactgcagttttctagattttgtacatattgctgctacctgctctgcactaatttccttcagccaatgtgtttgtggagttgtcagtgtgtcatacctttggccttgcgaggaccaatatgtacgcatgattggtgtgaaatcccttgctaaaagtgatgaatgttttgctccagtcacatAagacattgttcccattcttgtgcatctcctggttggcgcctcacagtaagcctttttctttctcgaatatgcctcgcagtaagccttgccactgtatttgtactgttcttttTGgtggTttattttctgctgtcattttacatattctcgatcatttacatatgcagtgctcagtcttatgtttgaatctcagtattttattcttacctcttcagtagtgtaaataactgtttcgggactgtcatcaatcttttgatatgcttgttagatcagtttatgtggttggtgttaactagaaaaccagatgatgtttgcctacagaattcaagaagttgaatctctatccctttTGTttaagcatcacttaatttcctattctattttttatttctttgactgcagttggcgtgctgtactgctgtgggtggcctgaaaatttaactgccaacattgtatgtcttgattttgtcactctttttaaaagatcttcctaaatgcattgctcaggagggacaaagttgatccaataagactgctcaaagcacgtgcaacaccgtacttattgaaggctttgatacttatattggagtagaccacaGgtaagttccctgtcatcctcacattgttgtttttgaaatttgactgattgtctacttttagttttctgaacatgtcttatatgtgatctacttatttgctttactagatccgaagctcgcacaaagaacattttggtcctaagggttatgatactggtgcaatcaaagggtcagttggcccctgttacatatatgaaagtaatgatctcttctttttggactcctgcacttggagaattcctattctgattattatcgctgatatgtggattttttttgaactgaaaagcatacatggattttgcagacaatgtttttgccgggtcggccgaaggaacggcgaccaaatttcattaagatgggggaagtacataaagttacaaactgtttcttgcttacaacgacaggaagctgtcgagatggtgctatggcaatgccacagcaacctgcaagctaggaacagctacattgaacagaaattttatgtggtactactcacgaaatatccggcttccttccagaccataatctcttccttaatagtctccacgagttggtctggccttctgacccttgcattgcgttctttccaaatctgccaacatatgagcatgcaggctaaagttgctcctgtagctcttccgaaaacagagcctcgcttgtatccaccaatctgtcggttggagaccttctatcccaggggtcggaaatgaaatgctggtccattgctgcatcaatctccacatttcagaggtgtaatcacagctgacaaacagatgatagcaatcctctggttctctgtcacacagaacacaattgtcatcatgtggccaccctctttttgcaaggttgtcccctggtaaacatcgccctttgacagccaatcacgtgaagaaacgaactctcgctgggggctttgcttgccaaattagctcactcactgggcagagctccattgccacgaagaacaatttgtaagccgaactacaggagaagtggccatcggtggttggtttccaacggatgctgtcttcatctgagtttaggtgaaccatttgtagttcatcccaaagctgaaaatattgagccatggcttcgttggagagggaacctctcagatctctgacccacctgttatttgacagggcttgagccacggtgatgcgcgatctgccaacaaaggttgacagagctggccacttccggtgaagaatccttgagaccttgaatgccttatgattttaggctccgtcaggctgtactcccaggtgctgtgttatgccatggcggaagcgaattgtggaatgaaaatacattaggccttgttcggttaatccttgtgagggagagattggaggggatttattccacacctattgtggtgtggaattattccccctcaatcccctccaatcctcttcaatctcctctaaaccgaacaagcctttagccggattggccgaaagaagaggccagctaaatctttttagtgaaaatacatggtctaatgaaagtaattctgcatccttttgagacaaagcttcacaatgatcacagtcaactgccagattatttttgcatccctgaacaagacaacgcgctattacagcacttcttcacgttgcaaaactggtacagaagaaacggcgccgccggccgccatgagcccatgaccatcagcgaggaggaaaggagttttttttttaatatttacagaaatattatatcggtggaaaaatttacAaaaataaaccctaccgccctccatttgagcggcaagctgacgtggtcactacgtcgtgtgcacattttgcgtttagacccttgcaatcctctataagagcggcaaggtgctaaatgcaatttttgccctgccAaaaaaacaattggctagttcttttttgcatatgagcctcttgccgcccttgcgaattttgcacggaggccccttgccgcctagacagagggtggcaaGggggccacatgcaaaattcacagccccctaaaaagaccatcatgcgcccgtgtgccacgtcaacttgccacccaaatggaaagcggcggggtctatttttgtatcgctgatataatatttttgtaaatattAaaaaaataaatttaaaaatgAaaaaagcccattacgacgaagcggtttgttgctctgcatccgacgtaagcccattacggcccatatAaaaaagcccatatgacatgtcacgttaaccgaggtattatgggccaTGtgtgtgtggccgcgtaggcctaatcgtcgtccctaaggagttcgagcggcgaccccggcccgacgacgaggaagccaccaccagctcaccgctggaatttttttcggttttagattttttaaaaaaaatatttacagaaataatctattggccaaaaaaattacaaaaatagaccctgccgcccacctctggggcggcaagctgacgtggcaaacgggggaggaacgggcggtgacggagggagggttttttgcaggaaaacccttgccgccctctggtggggcggcaaggggcccgaatgcaaaaaagccagtcggggccggctattttgcaggcggccccttgccgccctctggccgagcggcaggcctcgctgcctataaagggcctgctgcccagcccccagccctcattcttctctcctcaattccagtgaaaaaaaaagaagagaggagaggagaagagAagaaggggcgaagccctgccggattcagacgccgatttcaggtaatattcatagatcctatatgtgactattgagttaaatagtgtgtattctttaaatttgtttgaataaatgcattataTttttagggttttagttgtactaatctagaagtgcgtattgtaaatatcggtaactacgtagatctgctagtttggaatcaatacattaccgttgcattggcttacacaagaagatattacgttgtagatgtttattgcatgaaagagtaatatgatctagttatttcgttgacatatatgtcgaacaaacaaatattccaagtttacaatggaccaggaaacgtccgttacgggccaactggggtagatctgtcagattttattgtatcagaaaagggaattgatagaccggctgagaggagtgtaccttctatAaaaggatggttaatgagggcttgagagttgatccacagacaagtgacataacaatcaatgttatagtaagtcgggcaactgagggtttttattgggaactaatgccagttcaaaactctcgagtgtggagatggtatttggaaaatgcattgcaacgcaggtggcctctagctttggttccgtttgttcaCccgaaggatccaggtgtgcagatgaacatggatgatggcgagggaccaagtgctgaagtaaacgagacttctgtggaggaggtcaacgcacgagaggacgggggcgtagtagctccagtgggcattcaaccaggtggagtggccgacgagggggagactgtcggtgccattgtggatgaaatggagagggaggattctgacaacgagcgtgtagagaaaggtgattcgtcagatgatgagatggatattaatccagcagaatgggctagtgaggatttttctgggctgatcgtctctgaagaggatagtgtgagagggagtacaaagaaaatgaggttatttagggagcgatttatagtagagcagaagatatgaaggaggcggtaaaacattttgcagtgtcacttcatagagagttttgggttgccaagtcgaaccagtcgcaatatgaagttcggtgtgttaaggaaaaagatggttgtccctggagagtgcacgcgtataaggggaaatggaaggattattggatagtgtcagtcgttaccaagcatacatgttttctacctggtgttcagaaataccacaggaacattac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| CDS seq | MGLPPSLRGLSLRGCSDELSMQCRMAATEKLQMATCVPVCQTERQNSPHLLVETEAKQSSNQSMLLLSFWETNKNAAAAAAAVSPAPPATARRLSPPPLPNPIALVVLCLQLPGPHFLSRARVSPQQQQHGGLGCTVVRTGLMGVEWSVVDAAIGWLVQSVLGTLLAGKLEAWTREVGLAGDVRRLEVGMRSVEMVLAAAAARGRELVGNEPLARSLDDLRQLLYDAEDVVDELDYYRLQLEIEQREDAAAAVDSCVEGGNASSFSSTSSSTCRLVWNAATKLTSWASMAVDFVMAHAGSKRKRGQYELAQDDDTVVVVVPFENKDDISRRINEIATSLCTISDSVHKAIHLEASYCIAVTKEGVVSNRRLTTSVPVEQKVYGRDSDRDMIVELLVNGKSRDLNVLPIVGNGGVGKTTLARFVYRDRRIKDHFDLQMWVCVSSIFDEVRLTREMLEHACRDRQDCEKISSFNVLQEMLMDSVRNRRFLLILDDVWEDKDKNRWNRLLAPLRQNQTVGCMILATTRSPSVAKKIRTLTSVELKGLDDNNFWLFFKQCAFGDENHGDHPSLQVIGQQIAKTLKGYPLAAQSVGALLGQNLNYEHWWKIRDQWASLQKGDDDILPILKLSYDYLPSCLQRCFSYCSLFPQEHKFDGEKLIFAWISQSFVSCKDTKNRVEQTGREYLDKLVDLGFFQKDGPHYVMHGLMHELAQAVSSNDCATIDGLKSNSIPSTIRHLSIITSAYDEVEHDSFPTDKFERQLEKITCLKKLRTLMFFGHGPYGNRNLLKCLLTLCKHAKGLRYLRVHFAFMLIDALWNSIKPFHLRYIEFFNGSITFEKSCWWETEDGPRFSNVYAQLLPTCYHLQALDAGSSSNLVPRRINNLVNLRHLIADKERHSEIANVGRLTSLQELRKFRVENVDGFEIGQLQQMNELVSLGIFQLGNVKTKEEARRARLIDKDYLENLCLVWDDSTTSLKPAMATAEEVLEGLHPNRNVKRIKIRGYNGAICPMWLGSNVSVPLLRSLHLKNCSEWRAIQLEEISSLGKLNLIRMWSLVHVSIPSLDELVLIDLPNLEKCIGTYNRELTSNMRILRMERCGKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHSLKDLKLIAMPGVREVSVPYLKKLVIRNMPNLECCTCANLDLLSSCLEVLKITKCRKLTSFQVLQVSPPHCEEKTWLPNMNKLKVSVSIRGVLAPPAIEMRKHWPLFTIKSYEWSVLNDDTVAFNNLTSILNFRIINCPNLVSVSFEALSQLRSLQSLEIVDCPRLLWPQMMLEEACEGKTKFPSITHLSIVSSSMLGDPLLLPCTQSEQLTVNDKPSTFSCPVEEQSNHLSLLYISSTTTTATTESTRNGPILFHMPHLLYTYVKKLHISDCPNLVFCSRKVGFAGFTSLEELTVTRCPKVLMPMVHEGVSDDHIGGRFLLPPLLNQFETDHLSEKLQLYFPENHTSLRRLSVWDSPSLICLQLHSCTKLEELEIFNCKNLCTLGGLTFLSSLKIMKLARNPKLSTSWEFDSQDQQGTGDQAGDLSILSGLEWLETDDFSVLTMSFFKHLNSLRHLTLSSSRSYWRVVRLSEGQGRVLQQLTHLQELRFLCCDDLLVLPEQLHCLSSLKKLEIGYCPGILRLPEEGLPLLSLEELETRGCTEELNRQCRLAATEKLKVLIDGKVWNTVGQAAIGWLVESVLGSLFTDKLSSWLRRVNLDDDVEELVSEMRNVAVVLEAAKGMKVGDQNEPMAGSLLHLKDLLYDAEDVLDKLDYCRLQEQIIKGNSEDVKSTPTSSFFSINRWFTVTGWKRKREENHTLLDNKRQFSATIKQIAGKLRDARGDVSKGLKINGLKSPEDSNLSHRSTARATNATTTSYVLEPIVYGRATEIESIKNLIMSNRSDGMIVLPIVGNGGIGKTTLAQQIYKDSEIGKSAIKIWIHVSDKFDLHKVTREILECVSKKKQKETSNFNMLQQDLEENMKSKRFLIVLDDVWDVTTDCWNKLLAPLRANHVNPSKEKVTGNSMVIVTTRKNTTAKLCGTVGSINLEGLKDDDIWSLFKAYAFGSDKHSNNPILQNLGRKIAKELNGNPLAAKTVGSLLRRNLTVDHWSSIIENKEWKSLQHTDGIMHTLKFSYDHLPSHLQQCFSYCSLFPKEDIVLHDLMRDLARMVSKTECATIDGSECEKLAPSIRHLSIVTDSAYSEDPHGNISRNEEFEKRLLKVMSRSKLRTLVLIGQHDSLFFQSFQNLFKEAQHLRLLQMSSTYANFDSFLSNLVNYIHLRYLRLENEECEGALPQALDKCYHLQVLDIGSCTTPNEYVSNVSYVNGYDSDMSSEPSMDMETEGEELPSSDSNGSPSSEYFTDIISNEVIYGLEPHHSLKHNGVTSPTCLATSLTSLQTLYLENCGKWQILSLERLCLLKKLVLIRMSNVVEVSICSLEELVLIKMPKLKRCFCTSIRNLNDNLRVLMIKTCPALEVFPLFDNCQQFKIEQPSWLFRLSKLVIHKCPHLHVHNPLPPSTNVSKLSITGVSTLPTVEWSRGILRIGVLDDSDDPSVIDEPSDQLITLDDKVLSFHNLRFLTELVIAGCQNLTSISLQGLRQLIYLRTLEIRGCPKLFSSNMPPELVRENMAATYHNALPSLEYLFIAACGITGKWLSLILQYAQALQVLDLYECEQITGLSIGEEESSQPNLMSTPETLSLGHQGDSPTSSARDGLVRIPLNLISSLKHINIGDCPGLTYNGNDEGFAKLTSLESLRIMNGAKLLSSLVHGNGYDERKNIKLIPLSLEVLELRGYDLPEEVVPDFLRNPIRLKKLSVMDTLSLKYLQLQSCTALEELEIANCESLATLEGLQSLRGLKNLSIWGCPILPQWLRSSLEQVQELLPRLERLEIDDPSVFTSFCKHLTSLQRLILSSCNWELVRQTDEQDIALQLLTSLQELSFTCCRNLGDFPVDLYSLPSLKRLNIYYCKDISRLPEKCLPPSLEELDINDCSEELNDQCRMLPSKLKVKINQKYEDEQRRRFTNYLRFAFPMRTTSTEGRLLNQMLGCSGLSFRSLGRIPLAPLPHRRLDPRRWAVAGEVPSR
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| Protein seq | MGLPPSLRGLSLRGCSDELSMQCRMAATEKLQMATCVPVCQTERQNSPHLLVETEAKQSSNQSMLLLSFWETNKNAAAAAAAVSPAPPATARRLSPPPLPNPIALVVLCLQLPGPHFLSRARVSPQQQQHGGLGCTVVRTGLMGVEWSVVDAAIGWLVQSVLGTLLAGKLEAWTREVGLAGDVRRLEVGMRSVEMVLAAAAARGRELVGNEPLARSLDDLRQLLYDAEDVVDELDYYRLQLEIEQREDAAAAVDSCVEGGNASSFSSTSSSTCRLVWNAATKLTSWASMAVDFVMAHAGSKRKRGQYELAQDDDTVVVVVPFENKDDISRRINEIATSLCTISDSVHKAIHLEASYCIAVTKEGVVSNRRLTTSVPVEQKVYGRDSDRDMIVELLVNGKSRDLNVLPIVGNGGVGKTTLARFVYRDRRIKDHFDLQMWVCVSSIFDEVRLTREMLEHACRDRQDCEKISSFNVLQEMLMDSVRNRRFLLILDDVWEDKDKNRWNRLLAPLRQNQTVGCMILATTRSPSVAKKIRTLTSVELKGLDDNNFWLFFKQCAFGDENHGDHPSLQVIGQQIAKTLKGYPLAAQSVGALLGQNLNYEHWWKIRDQWASLQKGDDDILPILKLSYDYLPSCLQRCFSYCSLFPQEHKFDGEKLIFAWISQSFVSCKDTKNRVEQTGREYLDKLVDLGFFQKDGPHYVMHGLMHELAQAVSSNDCATIDGLKSNSIPSTIRHLSIITSAYDEVEHDSFPTDKFERQLEKITCLKKLRTLMFFGHGPYGNRNLLKCLLTLCKHAKGLRYLRVHFAFMLIDALWNSIKPFHLRYIEFFNGSITFEKSCWWETEDGPRFSNVYAQLLPTCYHLQALDAGSSSNLVPRRINNLVNLRHLIADKERHSEIANVGRLTSLQELRKFRVENVDGFEIGQLQQMNELVSLGIFQLGNVKTKEEARRARLIDKDYLENLCLVWDDSTTSLKPAMATAEEVLEGLHPNRNVKRIKIRGYNGAICPMWLGSNVSVPLLRSLHLKNCSEWRAIQLEEISSLGKLNLIRMWSLVHVSIPSLDELVLIDLPNLEKCIGTYNRELTSNMRILRMERCGKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHSLKDLKLIAMPGVREVSVPYLKKLVIRNMPNLECCTCANLDLLSSCLEVLKITKCRKLTSFQVLQVSPPHCEEKTWLPNMNKLKVSVSIRGVLAPPAIEMRKHWPLFTIKSYEWSVLNDDTVAFNNLTSILNFRIINCPNLVSVSFEALSQLRSLQSLEIVDCPRLLWPQMMLEEACEGKTKFPSITHLSIVSSSMLGDPLLLPCTQSEQLTVNDKPSTFSCPVEEQSNHLSLLYISSTTTTATTESTRNGPILFHMPHLLYTYVKKLHISDCPNLVFCSRKVGFAGFTSLEELTVTRCPKVLMPMVHEGVSDDHIGGRFLLPPLLNQFETDHLSEKLQLYFPENHTSLRRLSVWDSPSLICLQLHSCTKLEELEIFNCKNLCTLGGLTFLSSLKIMKLARNPKLSTSWEFDSQDQQGTGDQAGDLSILSGLEWLETDDFSVLTMSFFKHLNSLRHLTLSSSRSYWRVVRLSEGQGRVLQQLTHLQELRFLCCDDLLVLPEQLHCLSSLKKLEIGYCPGILRLPEEGLPLLSLEELETRGCTEELNRQCRLAATEKLKVLIDGKVWNTVGQAAIGWLVESVLGSLFTDKLSSWLRRVNLDDDVEELVSEMRNVAVVLEAAKGMKVGDQNEPMAGSLLHLKDLLYDAEDVLDKLDYCRLQEQIIKGNSEDVKSTPTSSFFSINRWFTVTGWKRKREENHTLLDNKRQFSATIKQIAGKLRDARGDVSKGLKINGLKSPEDSNLSHRSTARATNATTTSYVLEPIVYGRATEIESIKNLIMSNRSDGMIVLPIVGNGGIGKTTLAQQIYKDSEIGKSAIKIWIHVSDKFDLHKVTREILECVSKKKQKETSNFNMLQQDLEENMKSKRFLIVLDDVWDVTTDCWNKLLAPLRANHVNPSKEKVTGNSMVIVTTRKNTTAKLCGTVGSINLEGLKDDDIWSLFKAYAFGSDKHSNNPILQNLGRKIAKELNGNPLAAKTVGSLLRRNLTVDHWSSIIENKEWKSLQHTDGIMHTLKFSYDHLPSHLQQCFSYCSLFPKEDIVLHDLMRDLARMVSKTECATIDGSECEKLAPSIRHLSIVTDSAYSEDPHGNISRNEEFEKRLLKVMSRSKLRTLVLIGQHDSLFFQSFQNLFKEAQHLRLLQMSSTYANFDSFLSNLVNYIHLRYLRLENEECEGALPQALDKCYHLQVLDIGSCTTPNEYVSNVSYVNGYDSDMSSEPSMDMETEGEELPSSDSNGSPSSEYFTDIISNEVIYGLEPHHSLKHNGVTSPTCLATSLTSLQTLYLENCGKWQILSLERLCLLKKLVLIRMSNVVEVSICSLEELVLIKMPKLKRCFCTSIRNLNDNLRVLMIKTCPALEVFPLFDNCQQFKIEQPSWLFRLSKLVIHKCPHLHVHNPLPPSTNVSKLSITGVSTLPTVEWSRGILRIGVLDDSDDPSVIDEPSDQLITLDDKVLSFHNLRFLTELVIAGCQNLTSISLQGLRQLIYLRTLEIRGCPKLFSSNMPPELVRENMAATYHNALPSLEYLFIAACGITGKWLSLILQYAQALQVLDLYECEQITGLSIGEEESSQPNLMSTPETLSLGHQGDSPTSSARDGLVRIPLNLISSLKHINIGDCPGLTYNGNDEGFAKLTSLESLRIMNGAKLLSSLVHGNGYDERKNIKLIPLSLEVLELRGYDLPEEVVPDFLRNPIRLKKLSVMDTLSLKYLQLQSCTALEELEIANCESLATLEGLQSLRGLKNLSIWGCPILPQWLRSSLEQVQELLPRLERLEIDDPSVFTSFCKHLTSLQRLILSSCNWELVRQTDEQDIALQLLTSLQELSFTCCRNLGDFPVDLYSLPSLKRLNIYYCKDISRLPEKCLPPSLEELDINDCSEELNDQCRMLPSKLKVKINQKYEDEQRRRFTNYLRFAFPMRTTSTEGRLLNQMLGCSGLSFRSLGRIPLAPLPHRRLDPRRWAVAGEVPSR |
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| Function | Disease resistance protein RGA2 [UniProtKB/Swiss-Prot:Q7XBQ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0026990 | OsLiXu_04g0026990.01 | Chr04 | 33728992 | 33757141 | + | NAM | ||
| CDS seq | - |
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| Protein seq | MGLPPSLRGLSLRGCSDELSMQCRMAATEKLQMATCVPVCQTERQNSPHLLVETEAKQSSNQSMLLLSFWETNKNAAAAAAAVSPAPPATARRLSPPPLPNPIALVVLCLQLPGPHFLSRARVSPQQQQHGGLGCTVVRTGLMGVEWSVVDAAIGWLVQSVLGTLLAGKLEAWTREVGLAGDVRRLEVGMRSVEMVLAAAAARGRELVGNEPLARSLDDLRQLLYDAEDVVDELDYYRLQLEIEQREDAAAAVDSCVEGGNASSFSSTSSSTCRLVWNAATKLTSWASMAVDFVMAHAGSKRKRGQYELAQDDDTVVVVVPFENKDDISRRINEIATSLCTISDSVHKAIHLEASYCIAVTKEGVVSNRRLTTSVPVEQKVYGRDSDRDMIVELLVNGKSRDLNVLPIVGNGGVGKTTLARFVYRDRRIKDHFDLQMWVCVSSIFDEVRLTREMLEHACRDRQDCEKISSFNVLQEMLMDSVRNRRFLLILDDVWEDKDKNRWNRLLAPLRQNQTVGCMILATTRSPSVAKKIRTLTSVELKGLDDNNFWLFFKQCAFGDENHGDHPSLQVIGQQIAKTLKGYPLAAQSVGALLGQNLNYEHWWKIRDQWASLQKGDDDILPILKLSYDYLPSCLQRCFSYCSLFPQEHKFDGEKLIFAWISQSFVSCKDTKNRVEQTGREYLDKLVDLGFFQKDGPHYVMHGLMHELAQAVSSNDCATIDGLKSNSIPSTIRHLSIITSAYDEVEHDSFPTDKFERQLEKITCLKKLRTLMFFGHGPYGNRNLLKCLLTLCKHAKGLRYLRVHFAFMLIDALWNSIKPFHLRYIEFFNGSITFEKSCWWETEDGPRFSNVYAQLLPTCYHLQALDAGSSSNLVPRRINNLVNLRHLIADKERHSEIANVGRLTSLQELRKFRVENVDGFEIGQLQQMNELVSLGIFQLGNVKTKEEARRARLIDKDYLENLCLVWDDSTTSLKPAMATAEEVLEGLHPNRNVKRIKIRGYNGAICPMWLGSNVSVPLLRSLHLKNCSEWRAIQLEEISSLGKLNLIRMWSLVHVSIPSLDELVLIDLPNLEKCIGTYNRELTSNMRILRMERCGKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHSLKDLKLIAMPGVREVSVPYLKKLVIRNMPNLECCTCANLDLLSSCLEVLKITKCRKLTSFQVLQVSPPHCEEKTWLPNMNKLKVSVSIRGVLAPPAIEMRKHWPLFTIKSYEWSVLNDDTVAFNNLTSILNFRIINCPNLVSVSFEALSQLRSLQSLEIVDCPRLLWPQMMLEEACEGKTKFPSITHLSIVSSSMLGDPLLLPCTQSEQLTVNDKPSTFSCPVEEQSNHLSLLYISSTTTTATTESTRNGPILFHMPHLLYTYVKKLHISDCPNLVFCSRKVGFAGFTSLEELTVTRCPKVLMPMVHEGVSDDHIGGRFLLPPLLNQFETDHLSEKLQLYFPENHTSLRRLSVWDSPSLICLQLHSCTKLEELEIFNCKNLCTLGGLTFLSSLKIMKLARNPKLSTSWEFDSQDQQGTGDQAGDLSILSGLEWLETDDFSVLTMSFFKHLNSLRHLTLSSSRSYWRVVRLSEGQGRVLQQLTHLQELRFLCCDDLLVLPEQLHCLSSLKKLEIGYCPGILRLPEEGLPLLSLEELETRGCTEELNRQCRLAATEKLKVLIDGKVWNTVGQAAIGWLVESVLGSLFTDKLSSWLRRVNLDDDVEELVSEMRNVAVVLEAAKGMKVGDQNEPMAGSLLHLKDLLYDAEDVLDKLDYCRLQEQIIKGNSEDVKSTPTSSFFSINRWFTVTGWKRKREENHTLLDNKRQFSATIKQIAGKLRDARGDVSKGLKINGLKSPEDSNLSHRSTARATNATTTSYVLEPIVYGRATEIESIKNLIMSNRSDGMIVLPIVGNGGIGKTTLAQQIYKDSEIGKSAIKIWIHVSDKFDLHKVTREILECVSKKKQKETSNFNMLQQDLEENMKSKRFLIVLDDVWDVTTDCWNKLLAPLRANHVNPSKEKVTGNSMVIVTTRKNTTAKLCGTVGSINLEGLKDDDIWSLFKAYAFGSDKHSNNPILQNLGRKIAKELNGNPLAAKTVGSLLRRNLTVDHWSSIIENKEWKSLQHTDGIMHTLKFSYDHLPSHLQQCFSYCSLFPKEDIVLHDLMRDLARMVSKTECATIDGSECEKLAPSIRHLSIVTDSAYSEDPHGNISRNEEFEKRLLKVMSRSKLRTLVLIGQHDSLFFQSFQNLFKEAQHLRLLQMSSTYANFDSFLSNLVNYIHLRYLRLENEECEGALPQALDKCYHLQVLDIGSCTTPNEYVSNVSYVNGYDSDMSSEPSMDMETEGEELPSSDSNGSPSSEYFTDIISNEVIYGLEPHHSLKHNGVTSPTCLATSLTSLQTLYLENCGKWQILSLERLCLLKKLVLIRMSNVVEVSICSLEELVLIKMPKLKRCFCTSIRNLNDNLRVLMIKTCPALEVFPLFDNCQQFKIEQPSWLFRLSKLVIHKCPHLHVHNPLPPSTNVSKLSITGVSTLPTVEWSRGILRIGVLDDSDDPSVIDEPSDQLITLDDKVLSFHNLRFLTELVIAGCQNLTSISLQGLRQLIYLRTLEIRGCPKLFSSNMPPELVRENMAATYHNALPSLEYLFIAACGITGKWLSLILQYAQALQVLDLYECEQITGLSIGEEESSQPNLMSTPETLSLGHQGDSPTSSARDGLVRIPLNLISSLKHINIGDCPGLTYNGNDEGFAKLTSLESLRIMNGAKLLSSLVHGNGYDERKNIKLIPLSLEVLELRGYDLPEEVVPDFLRNPIRLKKLSVMDTLSLKYLQLQSCTALEELEIANCESLATLEGLQSLRGLKNLSIWGCPILPQWLRSSLEQVQELLPRLERLEIDDPSVFTSFCKHLTSLQRLILSSCNWELVRQTDEQDIALQLLTSLQELSFTCCRNLGDFPVDLYSLPSLKRLNIYYCKDISRLPEKCLPPSLEELDINDCSEELNDQCRMLPSKLKVKINQKYEDEQRRRFTNYLRFAFPMRTTSTEGRLLNQMLGCSGLSFRSLGRIPLAPLPHRRLDPRRWAVAGEVPSR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.076545 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0621500 | RBH | 0.234283 | 0.758905 | 0.758510 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g53030 | RBH | 0.183174 | 0.513526 | 0.189823 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0621500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0027010 | RBH | 0.0 | 0.0 | 0.467856 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0027730 | SBH | 0.032582 | 0.091726 | 0.118973 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0027490 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0027160 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0027430 | SBH | 0.803315 | 0.589062 | 0.756611 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0497400 | RBH | 0.7699455 | 1.2640205 | 1.43007 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0026250 | RBH | 0.000000 | 0.066579 | 0.089628 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0501600 | RBH | 0.6534845 | 0.8790395 | 6.51907 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0026660 | RBH | 0.016158 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0026480 | RBH | 0.000000 | 0.535674 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0026550 | RBH | 0.000000 | 1.231571 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0027100 | SBH | 0.155927 | 0.0 | 0.127634 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027170 | RBH | 0.071858 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G026400 | RBH | 0.000000 | 0.429317 | 0.108574 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0026260 | RBH | 0.0 | 2.343623 | 0.470135 |
| Os XI: R9311 | R9311 | AGIS | R9311C04g17522 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_04g0336900 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_04g0329700 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_04g0309000 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_04g0328900 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0407649500.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0417046300.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_017373 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0414539700.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0416365100.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0408504900.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0409594100.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0412150300.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0408487300.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0408439300.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0407559700.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0409056500.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0416149500.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0409853700.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0409725700.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0410420700.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0407643900.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0407641500.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0409540300.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0409298500.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0409158700.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0420888700.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0412187300.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0407548100.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0407575100.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0409196300.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0409378900.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0412810100.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0406253600.01 | RBH | None | None | None |
