Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_12G0352600 | OGI:12063050 | 3/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr12:23753030-23756439 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCACAGGTTAAGCCCATCTTTCTCACATAAGAACTTGAACACCCAAGCATTCAGTGTAGCATCACTCGCATTGCACAACCAACCACGCTTACCTTTATTCTCCTTGTCAGACAAATACTCACCAACAAGAACCCTTTGATCAGGTGTCATTGGGATTGGCTCTAGTTTCTGCCACAGAATTGCATGTGGATCAGTAAGCTGTGGCATTGGTGGAGGAGCTGTGGTAGCAAGTGTTTCTCGAAGTGATCTCATCGTAGTAGCGATTTCATCATTGGACTCGGCAAAGCGACTCTTGCTTTTTTGTGGCTTCTTAGTTGGTGATTTGTTGCCTCTTGGACGCTTCTTTTTACCTCGACTACCGCTGGAAGAGTTGTCAACAGTTGCATTCGTGGTTGGAGATGGCAAGGTGTCAGAATCCTCACCAGTTGGCTCTTCAGGTTGTGTGTAGCAGTTGAGGTCAAGCATATCTCTTGAATCATCGCTATCTGAACCATCACTATCGTTCATGCATGTGTTTTGATCCATAGCCAAAGAACCATCGGCACTAGATCCCGTGAATAGCTCCTGCATCTCATTAAAGAATCTGATGGGCTTAGAGAGTAGGCGTCTTGCTCTATCCTGCATAAAGAGCAAACATGTTAAATTGCTATATGCAGTTCAGATTCTAAAATGTAACATGCAAACATGTCAATTTTGTAGAAAACTTACACATAGCATTGCCTTTTCAGATTCTGAAATAGTCACCAAGAATCTTGTATGGTCAAATGTGTTGCCACTCTTGCTCAATGCTGCTGCAATGTACTTCCAATTTTCTTTGTGATACCTGTAGTGACGATCCACTTGATCGGCAGTCACCCCCATACCAAACTTCTTGTTTAAAGCATCAGCACACAACATGTGGTGACTCTTTTTTACCTTAAAACCTGCATGTTGTTTTTTCAAGTATTCCATGTACCACTCTAGCATGAATTTTGTTTGATCCTCATGCCAAGTCAAGGACCTCTCACGAGAGGTTGGAAAAGCATCAGCCTTCGCCTTTCCTTTAGCCATTCTGTTTTCATTCACAAGAGACAGCTCAATACATTAGTTACATAATTTAGAGAACAACTTAAATCTAAGGTACAGTTTGTCCTACTTTATCTTCCCACATCTTTTTAGCCGTATCATCTCTTTTCTTTGCCCATGCCAAATTCTCCTGGTGCATATCAGTACGGTTTCTTACACTCCGTGGCAGCGCTGCATACCAAGCAGCATCGTCATACACATAGACATCAGGACCGTCCTCTATAATCCAGTTATGAAGTGCACAACAAGCCATCACAATTTTCACTTGTGTTTTCAAATGAAAAAAATGGTTGGCATTTAAATATTCTGAAGCGGTTCTTCAAGGCACCAAATGCTCGCTCAATAGTTGTTCTAAGAGAGGAATGCCGAAGGTTGAATAACTCCTTTGGGTTCTCTGGTTCTCTAGCGCCCTTATATTCTTTTAGGTGATATCGGGTACCTCGGTATGGGGGTAATACACCAGGTCTAGCTGCATATCCGGCATCAGCTAGGAAATATTTACCTACATATTTTTTGTGCATATTAATTAGATAAGAACAGAATTGAAGTTTCAGATATGGAGCTATTAGGATATGATGTGAATAATCCTACCTTCTGGTATTTTAAGGCCATTAGTACGTGATAGAGCATCTTGAAGGACATAAGAATCATGGGCAAAACCTTCCCATCCAGCAAGAACATATAAGAACCTTAAGTCAAAATCAACTGCTGCTAGCACATTTTGTGATGGAAATTTCTTTCTACCCCTAAACCGGTCTTGCATATGCATAGGTACACATGCTGGAATATGTGTACCATCCAGGGCTCCTATGCATCCCTACGAAAATAGACAACTTTTTTTAGAACAAATAAAGGTGAATATGGCCCTAGACTCTTAGGGTATACTTAAACAGGGATTATCAATTTTGATGTACCTGAAAGTAGGGGTGAAATCTGCCATGAGAGTTTGTTATCTTTTGATGTGTGTCAATGGATTTGATGCATACAAGGTCACGGGCAAGGATACAGAGGGCATCTAAAACAAGATTGAAATACCTAGGGGTGAAATCTGCCATGAGAGTTTGTTATCTTTTGATGTGTGTCAATGGATTTGATGCATACAAGGTCACGGGCAAGGATACAGAGGGCATCTAAAACAAGATTGAAATACCTACTAACGGTCTCACCCGATCTCATGAATTCAAATACAATTGGTCTATTTGACCAATTGTGACCCACAACGTGAATAAACATAGCGACTTGTTCCTCTATTGTGACATGAAAAGTCTCCTCTAGCAGGGCACGTGATCTAAGCTCAGCACACAACTTATGGAAGACAACTTTCCTCATACGAAGCTCACTTATGCAATGTGCTTCGGTTCCATGGTTTAAACGGTCTAGACGTCTTAATCTTTCAACATCTCTATCAAGCATGGGAGCATATGTAATGGCTCTTTTCCTTTTTCTTCTATTAATCCTATACCAATACATGGCTAGGCACACCAGAATTCCAGCAATCAATCTTCTCCTCCATATATAATGGCAGTAGTCCAAGTAATACTGTAAATACAATTTTCTTTGACCTATCTAAAACATATTTTCAGAAAAAGTATGGAATCAGTAAGAGAAAAAAACTGATAGTTGATATCTATCTATTAAGGTCACTGTAAATACTGTAAGCACACTGTTACTGGTTATCAGTATCAGTAAGAGAAAAAAAACTGATAGTTAATATACTGTAAGCACACTTTGAATATCTTGAAAGCAACAACATGATATGGATATCTACTATTAAGCTCACTGTTTATCATATATTAGTCAAGAATGAAATCTATCTATTACTGCATACATATGCATAAAACTAATAGTGAAGAACTAGTATATATTAGTTCAGATCCGGTCCACATTCTAGTGCCACACGATTATTCAATCACCATCAATTATACAAGGATGCACATGTGCCTTAGTGCTAATCAGGCAAAAAAAAGGCACAGCTAAAGACTTCAGAAATCAACACGAAATCCATCAGATCGATGTCAGTGGAAAAGAGAGAATATTACCTTCCTTTCCGGCTGCGCGGAAGCGTCGTCGCCGCACACAAACGGCAGCTCCTTCCGACCCGCACAGACGCGTTGCTGCACACAAAGAACTTGATGAAGACGCAGCTGCTCCTCAAACACAGAAGTTCTTGTGTCCCTTTAATCAGATCTACACATGAAAAAATTCAGAGATTTAATAATGTAATGGATCTAGGAGAAGAAGAAGGAAAGAACGCACAACCTACAGGAGAAGGTAGCTAATCACAAGATCAACGAGCATGGCCGCAGGAGAGGATCTGCCATGGAAACGAGGTGGATAGCAGCCAT
More
|
||||||||||
| CDS seq | ATGGCTGCTATCCACCTCGTTTCCATGGCAGATCCTCTCCTGCGGCCATGCTCGTTGATCTTGGACACAAGAACTTCTGTGTTTGAGGAGCAGCTGCGTCTTCATCAAGTTCTTTGTGTGCAGCAACGCGTCTGTGCGGGTCGGAAGGAGCTGCCGTTTGTGTGCGGCGACGACGCTTCCGCGCAGCCGGAAAGGAAGATAGGTCAAAGAAAATTGTATTTACAGTATTACTTGGACTACTGCCATTATATATGGAGGAGAAGATTGATTGCTGGAATTCTGGTGTGCCTAGCCATGTATTGGTATAGGATTAATAGAAGAAAAAGGAAAAGAGCCATTACATATGCTCCCATGCTTGATAGAGATGTTGAAAGATTAAGACGTCTAGACCGTTTAAACCATGGAACCGAAGCACATTGCATAAGTGAGCTTCGTATGAGGAAAGTTGTCTTCCATAAGTTGTGTGCTGAGCTTAGATCACGTGCCCTGCTAGAGGAGACTTTTCATGTCACAATAGAGGAACAAGTCGCTATGTTTATTCACGTTGTGGGTCACAATTGGTCAAATAGACCAATTGTATTTGAATTCATGAGATCGGGTGAGACCGTTAGTAGGTATTTCAATCTTGTTTTAGATGCCCTCTGTATCCTTGCCCGTGACCTTGTATGCATCAAATCCATTGACACACATCAAAAGATAACAAACTCTCATGGCAGATTTCACCCCTACTTTCAGGGATGCATAGGAGCCCTGGATGGTACACATATTCCAGCATGTGTACCTATGCATATGCAAGACCGGTTTAGGGGTAGAAAGAAATTTCCATCACAAAATGTGCTAGCAGCAGTTGATTTTGACTTAAGGTTCTTATATGTTCTTGCTGGATGGGAAGGTTTTGCCCATGATTCTTATGTCCTTCAAGATGCTCTATCACGTACTAATGGCCTTAAAATACCAGAAGGTAAATATTTCCTAGCTGATGCCGGATATGCAGCTAGACCTGGTGTATTACCCCCATACCGAGGTACCCGATATCACCTAAAAGAATATAAGGGCGCTAGAGAACCAGAGAACCCAAAGGAGTTATTCAACCTTCGGCATTCCTCTCTTAGAACAACTATTGAGCGAGCATTTGAGGACGGTCCTGATGTCTATGTGTATGACGATGCTGCTTGGTATGCAGCGCTGCCACGGAGTGTAAGAAACCGTACTGATATGCACCAGGAGAATTTGGCATGGGCAAAGAAAAGAGATGATACGGCTAAAAAGATAATGGCTAAAGGAAAGGCGAAGGCTGATGCTTTTCCAACCTCTCGTGAGAGGTCCTTGACTTGGCATGAGGATCAAACAAAATTCATGCTAGAGTGGTACATGGAATACTTGAAAAAACAACATGCAGGTTTTAAGGTAAAAAAGAGTCACCACATGTTGTGTGCTGATGCTTTAAACAAGAAGTTTGGTATGGGGGTGACTGCCGATCAAGTGGATCGTCACTACAGGTATCACAAAGAAAATTGGAAGTACATTGCAGCAGCATTGAGCAAGAGTGGCAACACATTTGACCATACAAGATTCTTGGTGACTATTTCAGAATCTGAAAAGGCAATGCTATGTGATAGAGCAAGACGCCTACTCTCTAAGCCCATCAGATTCTTTAATGAGATGCAGGAGCTATTCACGGGATCTAGTGCCGATGGTTCTTTGGCTATGGATCAAAACACATGCATGAACGATAGTGATGGTTCAGATAGCGATGATTCAAGAGATATGCTTGACCTCAACTGCTACACACAACCTGAAGAGCCAACTGGTGAGGATTCTGACACCTTGCCATCTCCAACCACGAATGCAACTGTTGACAACTCTTCCAGCGGTAGTCGAGGTAAAAAGAAGCGTCCAAGAGGCAACAAATCACCAACTAAGAAGCCACAAAAAAGCAAGAGTCGCTTTGCCGAGTCCAATGATGAAATCGCTACTACGATGAGATCACTTCGAGAAACACTTGCTACCACAGCTCCTCCACCAATGCCACAGCTTACTGATCCACATGCAATTCTGTGGCAGAAACTAGAGCCAATCCCAATGACACCTGATCAAAGGGTTCTTGTTGGTGAGTATTTGTCTGACAAGGAGAATAAAGGTAAGCGTGGTTGGTTGTGCAATGCGAGTGATGCTACACTGAATGCTTGGGTGTTCAAGTTCTTATGTGAGAAAGATGGGCTTAACCTGTGA
More
|
||||||||||
| Protein seq | MAAIHLVSMADPLLRPCSLILDTRTSVFEEQLRLHQVLCVQQRVCAGRKELPFVCGDDASAQPERKIGQRKLYLQYYLDYCHYIWRRRLIAGILVCLAMYWYRINRRKRKRAITYAPMLDRDVERLRRLDRLNHGTEAHCISELRMRKVVFHKLCAELRSRALLEETFHVTIEEQVAMFIHVVGHNWSNRPIVFEFMRSGETVSRYFNLVLDALCILARDLVCIKSIDTHQKITNSHGRFHPYFQGCIGALDGTHIPACVPMHMQDRFRGRKKFPSQNVLAAVDFDLRFLYVLAGWEGFAHDSYVLQDALSRTNGLKIPEGKYFLADAGYAARPGVLPPYRGTRYHLKEYKGAREPENPKELFNLRHSSLRTTIERAFEDGPDVYVYDDAAWYAALPRSVRNRTDMHQENLAWAKKRDDTAKKIMAKGKAKADAFPTSRERSLTWHEDQTKFMLEWYMEYLKKQHAGFKVKKSHHMLCADALNKKFGMGVTADQVDRHYRYHKENWKYIAAALSKSGNTFDHTRFLVTISESEKAMLCDRARRLLSKPIRFFNEMQELFTGSSADGSLAMDQNTCMNDSDGSDSDDSRDMLDLNCYTQPEEPTGEDSDTLPSPTTNATVDNSSSGSRGKKKRPRGNKSPTKKPQKSKSRFAESNDEIATTMRSLRETLATTAPPPMPQLTDPHAILWQKLEPIPMTPDQRVLVGEYLSDKENKGKRGWLCNASDATLNAWVFKFLCEKDGLNL |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_12G0352600 | OsZS97_12T0352600.1 | Chr12 | 23753030 | 23756439 | - | makerRMon | ||
| CDS seq | ATGGCTGCTATCCACCTCGTTTCCATGGCAGATCCTCTCCTGCGGCCATGCTCGTTGATCTTGGACACAAGAACTTCTGTGTTTGAGGAGCAGCTGCGTCTTCATCAAGTTCTTTGTGTGCAGCAACGCGTCTGTGCGGGTCGGAAGGAGCTGCCGTTTGTGTGCGGCGACGACGCTTCCGCGCAGCCGGAAAGGAAGATAGGTCAAAGAAAATTGTATTTACAGTATTACTTGGACTACTGCCATTATATATGGAGGAGAAGATTGATTGCTGGAATTCTGGTGTGCCTAGCCATGTATTGGTATAGGATTAATAGAAGAAAAAGGAAAAGAGCCATTACATATGCTCCCATGCTTGATAGAGATGTTGAAAGATTAAGACGTCTAGACCGTTTAAACCATGGAACCGAAGCACATTGCATAAGTGAGCTTCGTATGAGGAAAGTTGTCTTCCATAAGTTGTGTGCTGAGCTTAGATCACGTGCCCTGCTAGAGGAGACTTTTCATGTCACAATAGAGGAACAAGTCGCTATGTTTATTCACGTTGTGGGTCACAATTGGTCAAATAGACCAATTGTATTTGAATTCATGAGATCGGGTGAGACCGTTAGTAGGTATTTCAATCTTGTTTTAGATGCCCTCTGTATCCTTGCCCGTGACCTTGTATGCATCAAATCCATTGACACACATCAAAAGATAACAAACTCTCATGGCAGATTTCACCCCTACTTTCAGGGATGCATAGGAGCCCTGGATGGTACACATATTCCAGCATGTGTACCTATGCATATGCAAGACCGGTTTAGGGGTAGAAAGAAATTTCCATCACAAAATGTGCTAGCAGCAGTTGATTTTGACTTAAGGTTCTTATATGTTCTTGCTGGATGGGAAGGTTTTGCCCATGATTCTTATGTCCTTCAAGATGCTCTATCACGTACTAATGGCCTTAAAATACCAGAAGGTAAATATTTCCTAGCTGATGCCGGATATGCAGCTAGACCTGGTGTATTACCCCCATACCGAGGTACCCGATATCACCTAAAAGAATATAAGGGCGCTAGAGAACCAGAGAACCCAAAGGAGTTATTCAACCTTCGGCATTCCTCTCTTAGAACAACTATTGAGCGAGCATTTGAGGACGGTCCTGATGTCTATGTGTATGACGATGCTGCTTGGTATGCAGCGCTGCCACGGAGTGTAAGAAACCGTACTGATATGCACCAGGAGAATTTGGCATGGGCAAAGAAAAGAGATGATACGGCTAAAAAGATAATGGCTAAAGGAAAGGCGAAGGCTGATGCTTTTCCAACCTCTCGTGAGAGGTCCTTGACTTGGCATGAGGATCAAACAAAATTCATGCTAGAGTGGTACATGGAATACTTGAAAAAACAACATGCAGGTTTTAAGGTAAAAAAGAGTCACCACATGTTGTGTGCTGATGCTTTAAACAAGAAGTTTGGTATGGGGGTGACTGCCGATCAAGTGGATCGTCACTACAGGTATCACAAAGAAAATTGGAAGTACATTGCAGCAGCATTGAGCAAGAGTGGCAACACATTTGACCATACAAGATTCTTGGTGACTATTTCAGAATCTGAAAAGGCAATGCTATGTGATAGAGCAAGACGCCTACTCTCTAAGCCCATCAGATTCTTTAATGAGATGCAGGAGCTATTCACGGGATCTAGTGCCGATGGTTCTTTGGCTATGGATCAAAACACATGCATGAACGATAGTGATGGTTCAGATAGCGATGATTCAAGAGATATGCTTGACCTCAACTGCTACACACAACCTGAAGAGCCAACTGGTGAGGATTCTGACACCTTGCCATCTCCAACCACGAATGCAACTGTTGACAACTCTTCCAGCGGTAGTCGAGGTAAAAAGAAGCGTCCAAGAGGCAACAAATCACCAACTAAGAAGCCACAAAAAAGCAAGAGTCGCTTTGCCGAGTCCAATGATGAAATCGCTACTACGATGAGATCACTTCGAGAAACACTTGCTACCACAGCTCCTCCACCAATGCCACAGCTTACTGATCCACATGCAATTCTGTGGCAGAAACTAGAGCCAATCCCAATGACACCTGATCAAAGGGTTCTTGTTGGTGAGTATTTGTCTGACAAGGAGAATAAAGGTAAGCGTGGTTGGTTGTGCAATGCGAGTGATGCTACACTGAATGCTTGGGTGTTCAAGTTCTTATGTGAGAAAGATGGGCTTAACCTGTGA
More
|
|||||||
| Protein seq | MAAIHLVSMADPLLRPCSLILDTRTSVFEEQLRLHQVLCVQQRVCAGRKELPFVCGDDASAQPERKIGQRKLYLQYYLDYCHYIWRRRLIAGILVCLAMYWYRINRRKRKRAITYAPMLDRDVERLRRLDRLNHGTEAHCISELRMRKVVFHKLCAELRSRALLEETFHVTIEEQVAMFIHVVGHNWSNRPIVFEFMRSGETVSRYFNLVLDALCILARDLVCIKSIDTHQKITNSHGRFHPYFQGCIGALDGTHIPACVPMHMQDRFRGRKKFPSQNVLAAVDFDLRFLYVLAGWEGFAHDSYVLQDALSRTNGLKIPEGKYFLADAGYAARPGVLPPYRGTRYHLKEYKGAREPENPKELFNLRHSSLRTTIERAFEDGPDVYVYDDAAWYAALPRSVRNRTDMHQENLAWAKKRDDTAKKIMAKGKAKADAFPTSRERSLTWHEDQTKFMLEWYMEYLKKQHAGFKVKKSHHMLCADALNKKFGMGVTADQVDRHYRYHKENWKYIAAALSKSGNTFDHTRFLVTISESEKAMLCDRARRLLSKPIRFFNEMQELFTGSSADGSLAMDQNTCMNDSDGSDSDDSRDMLDLNCYTQPEEPTGEDSDTLPSPTTNATVDNSSSGSRGKKKRPRGNKSPTKKPQKSKSRFAESNDEIATTMRSLRETLATTAPPPMPQLTDPHAILWQKLEPIPMTPDQRVLVGEYLSDKENKGKRGWLCNASDATLNAWVFKFLCEKDGLNL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0.8261125 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0226000 | SBH | 1.628796 | 2.489446 | 5.686174 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g40650 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0226000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0015040 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0015180 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0008480 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0014890 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0011350 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0277400 | SBH | 0 | 0 | 0.573538 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0018130 | RBH | 0.0 | 0.064020 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0252100 | SBH | 0.047881 | 0 | 0.005644 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0016960 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0012090 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0011150 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0018530 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0017530 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G013170 | SBH | 0.0 | 0.0 | 0.197501 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0012390 | SBH | 0.0 | 0.0 | 0.0 |
