Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_12G0074000 | OGI:12011430 | 8/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr12:4245892-4246714 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAGCATGCCAGATCACGGGGTCTTCTCCCCCAAATCTCACGTGCCAGTCGCTGCAGCGAGATGGACGCGGCGGCGTCATCCTCCTGCTCCTCGCCGGCGGCGGCTGCGGCCGCGGATGCCTCGTCGTCCGGCTCACCTGCTTCTTCGAGGAACACTCGCCATCGACAGCGTAAGGGGGTCCGGCTCCGGATGCTGCGACGTCGGGGGCGGCAGCCTAGCCGCTCCGGCGACATTGCCGATGTCATCGCCTTCAGAAGGAGGACGGAGGCGAGGGTGTCGAGGAAGCCGCCATTGTCCTTGCCGAGGATACGGCGCAGGGTGGGCTCGGACGGCTTGAGGGAGTAGAGCATGCCCAGGGCCTCCTCCTCCGGCGAGCTCGTCGACATGCGGGAATCGATCACCGAGTCGAGCAGGTCATCGTCCGACTTGGCCGACGTGTAGGTGGAGGCGGTGGCGTGGCTCTGGACGACGACGGAGACGAGGAACTTAATGGCACCGGGCGTGGCCTCGACGCAGCGCTTGTTGCGGTCGCTCTCTGTGGTGATGGCCTTGATCTCCCTGAGAGCGGCGAGCTGCTGCTGCCTGCCACCGCCGCCGAGCATCGTTGTCCCCTCGACAACGAGCGCGGCGAGGCGGCAGGAGTCGACGGGCGGGTGCGGGGTGGGGAACCGCTCGAAGGAGTGCGCGGCGCACCACGCCTGGATGACCTTGCCGCAGCGTGTGGTTGGGCGTCGCCTCCCGCTCTGCCAGCGCCAGCTGCCGGGTGATCTCGCGCTTCCTCTCGGGATGTCCTTCGCCACCGTCCTCGCGCAGGTGCGTCAT
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| CDS seq | ATGACGCACCTGCGCGAGGACGGTGGCGAAGGACATCCCGAGAGGAAGCGCGAGATCACCCGGCAGCTGGCGCTGGCAGAGCGGGAGGCGACGCCCAACCACACGCTGCGGCAAGGTCATCCAGGCGTGCGGTTCCCCACCCCGCACCCGCCCGTCGACTCCTGCCGCCTCGCCGCGCTCGTTGTCGAGGGGACAACGATGCTCGGCGGCGGTGGCAGGCAGCAGCAGCTCGCCGCTCTCAGGGAGATCAAGGCCATCACCACAGAGAGCGACCGCAACAAGCGCTGCGTCGAGGCCACGCCCGGTGCCATTAAGTTCCTCGTCTCCGTCGTCGTCCAGAGCCACGCCACCGCCTCCACCTACACGTCGGCCAAGTCGGACGATGACCTGCTCGACTCGGTGATCGATTCCCGCATGTCGACGAGCTCGCCGGAGGAGGAGGCCCTGGGCATGCTCTACTCCCTCAAGCCGTCCGAGCCCACCCTGCGCCGTATCCTCGGCAAGGACAATGGCGGCTTCCTCGACACCCTCGCCTCCGTCCTCCTTCTGAAGGCGATGACATCGGCAATGTCGCCGGAGCGGCTAGGCTGCCGCCCCCGACGTCGCAGCATCCGGAGCCGGACCCCCTTACGCTGTCGATGGCGAGTGTTCCTCGAAGAAGCAGGTGAGCCGGACGACGAGGCATCCGCGGCCGCAGCCGCCGCCGGCGAGGAGCAGGAGGATGACGCCGCCGCGTCCATCTCGCTGCAGCGACTGGCACGTGAGATTTGGGGGAGAAGACCCCGTGATCTGGCATGCTAG
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| Protein seq | MTHLREDGGEGHPERKREITRQLALAEREATPNHTLRQGHPGVRFPTPHPPVDSCRLAALVVEGTTMLGGGGRQQQLAALREIKAITTESDRNKRCVEATPGAIKFLVSVVVQSHATASTYTSAKSDDDLLDSVIDSRMSTSSPEEEALGMLYSLKPSEPTLRRILGKDNGGFLDTLASVLLLKAMTSAMSPERLGCRPRRRSIRSRTPLRCRWRVFLEEAGEPDDEASAAAAAAGEEQEDDAAASISLQRLAREIWGRRPRDLAC |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_12G0074000 | OsZS97_12T0074000.1 | Chr12 | 4245892 | 4246714 | - | makerRMon | ||
| CDS seq | ATGACGCACCTGCGCGAGGACGGTGGCGAAGGACATCCCGAGAGGAAGCGCGAGATCACCCGGCAGCTGGCGCTGGCAGAGCGGGAGGCGACGCCCAACCACACGCTGCGGCAAGGTCATCCAGGCGTGCGGTTCCCCACCCCGCACCCGCCCGTCGACTCCTGCCGCCTCGCCGCGCTCGTTGTCGAGGGGACAACGATGCTCGGCGGCGGTGGCAGGCAGCAGCAGCTCGCCGCTCTCAGGGAGATCAAGGCCATCACCACAGAGAGCGACCGCAACAAGCGCTGCGTCGAGGCCACGCCCGGTGCCATTAAGTTCCTCGTCTCCGTCGTCGTCCAGAGCCACGCCACCGCCTCCACCTACACGTCGGCCAAGTCGGACGATGACCTGCTCGACTCGGTGATCGATTCCCGCATGTCGACGAGCTCGCCGGAGGAGGAGGCCCTGGGCATGCTCTACTCCCTCAAGCCGTCCGAGCCCACCCTGCGCCGTATCCTCGGCAAGGACAATGGCGGCTTCCTCGACACCCTCGCCTCCGTCCTCCTTCTGAAGGCGATGACATCGGCAATGTCGCCGGAGCGGCTAGGCTGCCGCCCCCGACGTCGCAGCATCCGGAGCCGGACCCCCTTACGCTGTCGATGGCGAGTGTTCCTCGAAGAAGCAGGTGAGCCGGACGACGAGGCATCCGCGGCCGCAGCCGCCGCCGGCGAGGAGCAGGAGGATGACGCCGCCGCGTCCATCTCGCTGCAGCGACTGGCACGTGAGATTTGGGGGAGAAGACCCCGTGATCTGGCATGCTAG
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| Protein seq | MTHLREDGGEGHPERKREITRQLALAEREATPNHTLRQGHPGVRFPTPHPPVDSCRLAALVVEGTTMLGGGGRQQQLAALREIKAITTESDRNKRCVEATPGAIKFLVSVVVQSHATASTYTSAKSDDDLLDSVIDSRMSTSSPEEEALGMLYSLKPSEPTLRRILGKDNGGFLDTLASVLLLKAMTSAMSPERLGCRPRRRSIRSRTPLRCRWRVFLEEAGEPDDEASAAAAAAGEEQEDDAAASISLQRLAREIWGRRPRDLAC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0214355 | 0.038352 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0183450 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g08290 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0183450 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0005540 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0005690 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0334700 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0005660 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0005580 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0005810 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0005670 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G017950 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0018240 | RBH | 0.0 | 0.0 | 0.0 |
