Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsZS97_12G0002600 | OGI:11000380 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr12:212395-217453 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | AGAGAAGACAAGTCAAGCATAAGTGCAAAACCAGCAGCCAGGTAGTCTCCGCTTCTTGATCTTGTTTGCAAAAAAGGCTCACTGCATCTATAATCTATTTACTCCAAAATTTAGGTTATGATTTTCTTCTTCTTTTGATTTACTTACATGGCAAGTCCACTATTTTAGGTGTTAGTACAATATTACTTGACAAGCATTTGTCGATTAATTTGCTAAAGAAACTAAAGAACTTTATTGATTTGCAAAGAAAGAGAACTAGAAGTTCTTTTTTACAATACACATCGGATCTTGTTGTCTTCAATTTCTATTTATATAAGTTATTCAGACTACTTTATTTCTGTGGTTTTTTTATTGTCTAATATACTATCAACATTATTTATCAAGAATAAAATATTATATAACAATTTACAACTAGTTGATTTATTATTTACTATGTTAGTAATATTGTTTTTGTCACTTTAGATATTAGATCACAGTTACATATTACAAATAAAAAATATTTAACCTTAAGGGCCTATGTCACCGAGTTCACGTAGGGCCCTTGAAATTATAGAGCTAGCCCTACGAACAGGCGGCGGAGGGGGAAAAATTGGAGTCGGTGAGAAAGATGGTGAGCAGCATGAAGCTTCCTTTGGTGGATGGGGAGGAGCAGTCGTCCTATGACCCAATGGGGGAAAAGTTGAAGATGATGAGCAGCAAGCATTTTTTGGAGGAGCAGCGTCTAGTGGAGTTGGAGTTGGAGTTGGAAGATGAAGAGGAGGTGGAAGATGAGGAGTTGGCCGAGCTGATAACGGCGCGAGACTTCCGTGTCAGCTGGGAACATCGCTTTACCCCTCGCTATTCCTTCAATGACACCAGTAAGTAATAAATCCTCCTCCGCCCCGCCGTTTTATTCTGCTTCCGTTTCTTTCTTTACTTCAACGCAATCAAGATTATTTCTGCGAATCTATCTATCATGTTTCGTATCACCATTATATACTGGAGTATATACCACTATCTATTTGTGCTCCAATTCTGGTTGTTCCAAGTGTCTTGTTTTATTTTGGGTTAAGAGATTGCCAGGCTAAATACCTGTGTTTGTGTGTCCTCAACTATATATGCAACACATTTAGCATGTGAAACAAGTGCTAGGTTTTCCTAATTACACTCTATAAACCATCACAGTACAAATCCTGTTAATCACAACAGGATACTAGAAAGATTAAATTTGAACCAGATCCGATAGATTATCTGACGTGGTGCCAACTAATTATGTTTCATATATATATTGGGCCGCAAAAGCATGTTAAATAATCTGAGCCAATTTGTCTTCTTTTTCCCTTCATCTAGCACAATGAATTCTGACAGAATTAAAGTGGAATATCAATTAGTTGCTGATTCCCTACTTATTGGAGCAATAATCCCTAATTTTGTATGTTTGTTTATCTTCTTTTTTTTTTTCAAAGTAGCAGGCAGGAGATCTGCTAGCTAAATACATTAGAAGAAGCAACAAATAGAGTCTAGTTTAGTACATACTAAATAGGATATCTACAGCGCCAAGAATAGCAACTTGCATATCAAAATCCGCATTAGAGGGTATCAGCACTAAACGCTAAGGGTAGCTCGTTTACGTCTTGTATCACCAAGAAAACCACCTTGTTCTCGGGTTGGTCCTGGAAGACCCTCATGTTTCTTTCAAGCCGGATATTCCACCACGTAACAAGCAAAGCTCCCAATACTCCCTTTCTGTTTTCACATGGTGTCATTGCACTTGACTTGTTCCACCAATCTGATAGACAATTGTAGGTTGAGTTCATTGCTGTGATCTGTAGTTTTTAGCGAATCATTTCCTACACTTTGGTCGTGAAGGAATATTCCTTAGCAAGATGATTGGTGTCCTCGAAAAAGCTTTAGTGCAGAGAGTACAAATCTCATTACATGGCCAATGTCTTTTAAGCAAATTTTTGGTTGCTAGTACCTTGTGGTGTAACAATAGCCAACCAAATAATTGGTGCTTTGGTTCGTTGTTTGCTTTCCAGAGGCTGGTAAAATTTGAGTATGACACACTTCCAGTGAATTGTGCAAGATACGCTCTTTTTGCCATATATGATGTCATTTTTTATCCCTGGCTGCAGTTTAACCCCAGCTAATAGATCTGCAATCCAAACTAGTTCATTGATTTCTTCAATTGTTGTTAGGGGCCTTAGCAGGAAATCTGTTGTCAGATATTTCAACTAGAATAGAGTTGTTTGTTCTCTTTGCTAGTTTGAACAGACCTGGCACCAGATCCTTTTTTCTCCCATTCTGAATCCAAGTAAATTTCATAAAACTACAGGTATTTTGCACAATTTATCACAAAACTACATATTTAAGAGCTTGTTTTACAAAACTACAGATTTAATGTCTCTGTTTATCACAAAACTACAGGTGCTTTGTATAATCTATCACAAAACTATATATTTAAGAACTTGTTTCACAAAACTATAGATTTAGTGTATTCGTTTATCCCAGAACTACACATTTAGTGTCTTCATTTATCACAAAACTACGGATTTAGTGTCTCCAACTTGTAGTTTTGTGATAAATGAATATATTAAATCTGTAGTTTTGTGAAATAAATTCTTAAATATGTAGTTTTGTGAAATATTGTGCAAAGTACCTGTAGTTTTGTGATAAATGAATATACTGAATTTGTAGTTTTATGAAACAAGCTCTTAAATAGATCATGCAAAGTATATGTGGTTTTATGTAATTTACTCATCCAATTATCGTTCCAGAAGGTAGCTTTACTCCCGTCACCCAACGTGATGGTAGTTGCCGCCGCAAAAGGTTCTTTGTTGATTGTATCACAAGGAGCCTCCATTTGGCGAAGGGCCTTGGCAAACTCCTGCAGCTCCAAAAATGGGTCCACCTAAATTTCTTGGTTTGGCTGGCATACAGTCGCCCAATTTACCAAACTGTATCCAGGGGTGATATTTTCTGGGTCTTACCCTTTCCACAAAAAGGCTCTCCTAATTCTGTCAATTTTCTTGATCAACCATTTTTGTACGTAGAACTGTGAGATGGTATGCTGGGATTGAGCTCAGAGCAGTCTTGATATGTTGTTTATCTTACTCCTCATTCTCATCAAGGTTAATGTCTAGTACTCCATATATGTGCTTATCCACATTGTCACATCAATCATTTAACTAAAACTTGGATTTTTGAGTCGAAAATGGGACACAACAATAGCTAAGAGCAGCATCCACAATGCTATTATTTGATAATAAATATTACTGCTACTTAACTGCAGCAACCGTATGTCCCATACGCTATACGGAGGGACCTATCCCAAGATATGCTTGCTGTGGTGATACCTTGCAGATCTTCTCTCTCCAAGTGAAAGAAGCAAAAGGTGGTCTTGACTGGCCGCTGCATGTGTATGGCTTGGTTGCCACCAGGGACTCTGTAGATCAAAGGCGCAACCTTTTTTTCAGGTGCACAAAGGATAATTGTTAAATTCTCACTCCACAGGTATCTATCTTGTAATTTCCTTATACCTTTATTGTTTTCTCATTTTTCTTGCAGCTTGAAGTGCTCAACCTATCATACTAGTAGATTACTACTGTTCTGTACACTTGTTTGTATAAATATGTTGTCTTTTTGGAGTTATTAGTGCATTCATAGGCTGGCTGCACCTAAACTGTCAATTGAAGGCATGTTTGCAATTTTTTTCCTTACCACTCTTTTTTCACATAATTCATTGGTAAAAACTAAAAACTGAGGATTTGTTTAGTTCCCAAATTTTTTTTCTCAAAAACGTCACATCGAATCTTTGGATATATGTATGGAGCATTAAATATAGATAAAAAAACTAATTGCACGGTTTGCACGGAAATCGCGAGACGAATCTGGTGAGCCTAATTAGTCCATGATTAGCCATAAGTGCTACAGTAACCTACATGTGCTAATGACGGATTAATTAGGCTTAATAAATTCGTCTCGCAGTTTCTAGGCGAGTTATGAAATTAGTTTTGTCATTCGTGTCCGAACCCCTTCCGGCATCCGGTCAAACGTCCAATGACACCTAAAAATTTTCTTTTCGCGAACTAAACACACTCACTATGACCTATACCTATACTCCTTTTGAAATAATCCACTCGTGGTGTTGGCATTGAATCTGCTGTGTCAACTCTTCCTACCACAGTTTTCTATAAATCAACCTGTGATGATAGTTAATATTATCAACAGCCAAACATAGCAGTATTGCCACATGTATAACCAAGATGAGCACTCACTGTTGCAAATAAATGAATAGCATATTGCATGCAAAACATAAATTATGTTTGTTTATTTTAGGCAATATTATGGCATACTTTCTTTTATTGGTAGCAAAGCTATTGCATTTACCTTGTCTATGGAAATAGAAGTTTTGTGATGGACCGTCTTTAACATGGGCTCGTAGGAAATAACTGCATGGATTGGTTGCATACTGGATCCTTATTATACGGAGGGAACCAAGTTTTAGTAATAATCAATTGGTTGTGATGCCTGCAGGATTCACACCTGCTGTTAACAGGCCCATCTCGTGCAGTTGTGGTAATTGATCCAGTAACGTTTGAAGTTGAACTAAAGGTAAAAGGAAAAACAGAGGCTGAGGATAAGGTGTTGAGCCTAAGGGTCTTTATGCAGCACTACAATGGTGAGTATCCAAGTTAGAGAGGGGTCATGGCCAGATCATATACGAGGGGCAGCGTAGAGGGAGGGGATTTTGTGCTGCTTGATTCTGCCTATTAACAGCTACGATGGTGGCATTGAGCTTTCAAGGCGTGTGGTTTGTGTGGAATTGAGGGGAGATGTGGTGGCAATGGCATCGTCGCACAACCTCAATGTCGTCGTGGGTTCAACCTTGAGGCAAATGCTCTCGGGCATGCCTTGATCCATACTAATCACTTTAGCTTGTTTTGATTTTTGAGTTAACGTACAGCTCGGCTGCATATGCTTGCGTAATTGTGTTTTTGGCGTCATGGTCTGCTCAACCCCAGCCGTGTTCAGGACTAGTACCATGTAACATATATATGCTTCAATGTCAGAATCCAAC
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CDS seq | ATGGTGAGCAGCATGAAGCTTCCTTTGGTGGATGGGGAGGAGCAGTCGTCCTATGACCCAATGGGGGAAAAGTTGAAGATGATGAGCAGCAAGCATTTTTTGGAGGAGCAGCGTCTAGTGGAGTTGGAGTTGGAGTTGGAAGATGAAGAGGAGGTGGAAGATGAGGAGTTGGCCGAGCTGATAACGGCGCGAGACTTCCGTGTCAGCTGGGAACATCGCTTTACCCCTCGCTATTCCTTCAATGACACCACAACCGTATGTCCCATACGCTATACGGAGGGACCTATCCCAAGATATGCTTGCTGTGGTGATACCTTGCAGATCTTCTCTCTCCAAGTGAAAGAAGCAAAAGGTGGTCTTGACTGGCCGCTGCATGATTCACACCTGCTGTTAACAGGCCCATCTCGTGCAGTTGTGGTAATTGATCCAGTAACGTTTGAAGTTGAACTAAAGGTAAAAGGAAAAACAGAGGCTGAGGATAAGGTGTTGAGCCTAAGGGTCTTTATGCAGCACTACAATGGTGACTACGATGGTGGCATTGAGCTTTCAAGGCGTGTGGTTTGTGTGGAATTGAGGGGAGATGTGGTGGCAATGGCATCGTCGCACAACCTCAATGTCGTCGTGGGTTCAACCTTGAGGCAAATGCTCTCGGGCATGCCTTGA
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Protein seq | MVSSMKLPLVDGEEQSSYDPMGEKLKMMSSKHFLEEQRLVELELELEDEEEVEDEELAELITARDFRVSWEHRFTPRYSFNDTTTVCPIRYTEGPIPRYACCGDTLQIFSLQVKEAKGGLDWPLHDSHLLLTGPSRAVVVIDPVTFEVELKVKGKTEAEDKVLSLRVFMQHYNGDYDGGIELSRRVVCVELRGDVVAMASSHNLNVVVGSTLRQMLSGMP |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsZS97_12G0002600 | OsZS97_12T0002600.1 | Chr12 | 212395 | 217453 | + | makerRMon | ||
CDS seq | ATGGTGAGCAGCATGAAGCTTCCTTTGGTGGATGGGGAGGAGCAGTCGTCCTATGACCCAATGGGGGAAAAGTTGAAGATGATGAGCAGCAAGCATTTTTTGGAGGAGCAGCGTCTAGTGGAGTTGGAGTTGGAGTTGGAAGATGAAGAGGAGGTGGAAGATGAGGAGTTGGCCGAGCTGATAACGGCGCGAGACTTCCGTGTCAGCTGGGAACATCGCTTTACCCCTCGCTATTCCTTCAATGACACCACAACCGTATGTCCCATACGCTATACGGAGGGACCTATCCCAAGATATGCTTGCTGTGGTGATACCTTGCAGATCTTCTCTCTCCAAGTGAAAGAAGCAAAAGGTGGTCTTGACTGGCCGCTGCATGATTCACACCTGCTGTTAACAGGCCCATCTCGTGCAGTTGTGGTAATTGATCCAGTAACGTTTGAAGTTGAACTAAAGGTAAAAGGAAAAACAGAGGCTGAGGATAAGGTGTTGAGCCTAAGGGTCTTTATGCAGCACTACAATGGTGACTACGATGGTGGCATTGAGCTTTCAAGGCGTGTGGTTTGTGTGGAATTGAGGGGAGATGTGGTGGCAATGGCATCGTCGCACAACCTCAATGTCGTCGTGGGTTCAACCTTGAGGCAAATGCTCTCGGGCATGCCTTGA
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Protein seq | MVSSMKLPLVDGEEQSSYDPMGEKLKMMSSKHFLEEQRLVELELELEDEEEVEDEELAELITARDFRVSWEHRFTPRYSFNDTTTVCPIRYTEGPIPRYACCGDTLQIFSLQVKEAKGGLDWPLHDSHLLLTGPSRAVVVIDPVTFEVELKVKGKTEAEDKVLSLRVFMQHYNGDYDGGIELSRRVVCVELRGDVVAMASSHNLNVVVGSTLRQMLSGMP
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0 | 0.0570455 | 0.013646 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0103150 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g01250 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os12g0103150 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0000100 | RBH | 0.0 | 0.0 | 0.000000 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0000250 | RBH | 0.0 | 0.000000 | 0.494638 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0000230 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0000110 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0000250 | SBH | 8.471019 | 3.542328 | 10.424809 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0002500 | RBH | 0 | 0.070706 | 0.0084565 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0000270 | SBH | 0.458378 | 0.570691 | 0.744708 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0002700 | RBH | 2.7554605 | 0.7957155 | 3.502628 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0000110 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0000250 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0000240 | SBH | 1.311463 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0000250 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0000240 | SBH | 0.332196 | 0.000000 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G000270 | SBH | 0.501846 | 1.450618 | 1.664167 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0000240 | SBH | 1.000108 | 0.0 | 3.680707 |