Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0433600 | OGI:11061890 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:30748987-30750309 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TATCTGTTGGTGATGCTCTTATGGTCAATCTTAGGATTGTAACCTATATGTTGGTGATGCTCTTATGGTCAATCTTCCAGTCTAGATGTTTTTTTCCCTGGGGATTTTCAGTGCTAACTTGAGGTTTCCTCCCATCCTTAGAAGGTATATACCTTCTTACCACCTATATATGGTAGTTATATTTTCAACTCAAGCTAGCTTTGCATATATATTTCCTTGCAACACATGGTAGGAGTATTTGTGACTGCGAATTAATACACTATACTTGTTCTTATCCTATAATCTCGTCCTATTGTAGAACCAGACTCAAAGTGCTAGCAATTGCAATTAATGGCTGAGGCTGTGATTCTTCTAACCGTGAAGAAGATTGGTGTTGCCCTGGGGAATGAAGCAATAAACCAAGCCACATCATATTTCAAAAAATCTGTCACACAGCTGACAGAGCTTCAAGGTAGCATGGGGTGCATCAGGAGGGAACTCCGGCTTATGCATGAGTTTCTTTCCGGAATGGATGTTCGTAATCGCAACAACCGGAAGTATGAAATCTGGGTGGAGGAGGTGAGGATGCTAGTCTATCAGATCGAGGACATTGTGGATGATTACTTGCATCTTGTTGGCCACAAGCATCACATTGGATGGGGTACCTATCTGAAGAAAGGATTCAGGAGACCAAATGTTCTGCTCTCTTTGAACAAGATAACGTCATTGGTTAAGGACGTGGAGGCCAGTTTAGTGCACTTGTTCCAGGCCAAAGAACGATGGGTGTTTATGGATGTCGGTGCGGCTACTGGTGGTGAAAGCTCAAGCTACATTGTTGTTGAGAAGTCCCGGCATCTAGCTAGCATTTCACGCTCCCTCGATGAAGAAGATCTTGTGGGGGTGGATGGAAACAAAAAAAAACTCCACGAGTGGCTGTCAAGTAATGAGTTGCAACGTGATGTGATAGTGGTGCATGGGATGGGAGGTCTGGGTAAAACAGCTTTGGCAGCAGATGTGTACAAGAGTGAAAAAGAGAAGTTTGAATGCCATGCCTGGGTCTCCATCTCTCAAACTTACTCCATCAAGGCCGTTCTAAAATGTTTGATCAATGAACTAGATGAGAAAAAGAGTATTCGGGGTAACATTAGCGACATGGATACCGGAGGTCTTCAAGATGAACTAAAGAAATTCTTAAAGGATCAGAAATATTTGATCGTATTGGATGATGTTTGGGTACCAGAAGCAGTCAATGACTTGTTCGGAGCACTTGTCTCAAATCTCAGCAGGAGCAGAGTTCTTGTGACAACACGCATTGATGGTGTTGCTCACCAGACAAGAGGATAA
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| CDS seq | ATGGCTGAGGCTGTGATTCTTCTAACCGTGAAGAAGATTGGTGTTGCCCTGGGGAATGAAGCAATAAACCAAGCCACATCATATTTCAAAAAATCTGTCACACAGCTGACAGAGCTTCAAGGTAGCATGGGGTGCATCAGGAGGGAACTCCGGCTTATGCATGAGTTTCTTTCCGGAATGGATGTTCGTAATCGCAACAACCGGAAGTATGAAATCTGGGTGGAGGAGGTGAGGATGCTAGTCTATCAGATCGAGGACATTGTGGATGATTACTTGCATCTTGTTGGCCACAAGCATCACATTGGATGGGGTACCTATCTGAAGAAAGGATTCAGGAGACCAAATGTTCTGCTCTCTTTGAACAAGATAACGTCATTGGTTAAGGACGTGGAGGCCAGTTTAGTGCACTTGTTCCAGGCCAAAGAACGATGGGTGTTTATGGATGTCGGTGCGGCTACTGGTGGTGAAAGCTCAAGCTACATTGTTGTTGAGAAGTCCCGGCATCTAGCTAGCATTTCACGCTCCCTCGATGAAGAAGATCTTGTGGGGGTGGATGGAAACAAAAAAAAACTCCACGAGTGGCTGTCAAGTAATGAGTTGCAACGTGATGTGATAGTGGTGCATGGGATGGGAGGTCTGGGTAAAACAGCTTTGGCAGCAGATGTGTACAAGAGTGAAAAAGAGAAGTTTGAATGCCATGCCTGGGTCTCCATCTCTCAAACTTACTCCATCAAGGCCGTTCTAAAATGTTTGATCAATGAACTAGATGAGAAAAAGAGTATTCGGGGTAACATTAGCGACATGGATACCGGAGGTCTTCAAGATGAACTAAAGAAATTCTTAAAGGATCAGAAATATTTGATCGTATTGGATGATGTTTGGGTACCAGAAGCAGTCAATGACTTGTTCGGAGCACTTGTCTCAAATCTCAGCAGGAGCAGAGTTCTTGTGACAACACGCATTGATGGTGTTGCTCACCAGACAAGAGGATAA
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| Protein seq | MAEAVILLTVKKIGVALGNEAINQATSYFKKSVTQLTELQGSMGCIRRELRLMHEFLSGMDVRNRNNRKYEIWVEEVRMLVYQIEDIVDDYLHLVGHKHHIGWGTYLKKGFRRPNVLLSLNKITSLVKDVEASLVHLFQAKERWVFMDVGAATGGESSSYIVVEKSRHLASISRSLDEEDLVGVDGNKKKLHEWLSSNELQRDVIVVHGMGGLGKTALAADVYKSEKEKFECHAWVSISQTYSIKAVLKCLINELDEKKSIRGNISDMDTGGLQDELKKFLKDQKYLIVLDDVWVPEAVNDLFGALVSNLSRSRVLVTTRIDGVAHQTRG |
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| Function | Disease resistance protein RPP13 [UniProtKB/Swiss-Prot:Q9M667] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0433600 | OsZS97_11T0433600.1 | Chr11 | 30748987 | 30750309 | + | makerRMon | ||
| CDS seq | ATGGCTGAGGCTGTGATTCTTCTAACCGTGAAGAAGATTGGTGTTGCCCTGGGGAATGAAGCAATAAACCAAGCCACATCATATTTCAAAAAATCTGTCACACAGCTGACAGAGCTTCAAGGTAGCATGGGGTGCATCAGGAGGGAACTCCGGCTTATGCATGAGTTTCTTTCCGGAATGGATGTTCGTAATCGCAACAACCGGAAGTATGAAATCTGGGTGGAGGAGGTGAGGATGCTAGTCTATCAGATCGAGGACATTGTGGATGATTACTTGCATCTTGTTGGCCACAAGCATCACATTGGATGGGGTACCTATCTGAAGAAAGGATTCAGGAGACCAAATGTTCTGCTCTCTTTGAACAAGATAACGTCATTGGTTAAGGACGTGGAGGCCAGTTTAGTGCACTTGTTCCAGGCCAAAGAACGATGGGTGTTTATGGATGTCGGTGCGGCTACTGGTGGTGAAAGCTCAAGCTACATTGTTGTTGAGAAGTCCCGGCATCTAGCTAGCATTTCACGCTCCCTCGATGAAGAAGATCTTGTGGGGGTGGATGGAAACAAAAAAAAACTCCACGAGTGGCTGTCAAGTAATGAGTTGCAACGTGATGTGATAGTGGTGCATGGGATGGGAGGTCTGGGTAAAACAGCTTTGGCAGCAGATGTGTACAAGAGTGAAAAAGAGAAGTTTGAATGCCATGCCTGGGTCTCCATCTCTCAAACTTACTCCATCAAGGCCGTTCTAAAATGTTTGATCAATGAACTAGATGAGAAAAAGAGTATTCGGGGTAACATTAGCGACATGGATACCGGAGGTCTTCAAGATGAACTAAAGAAATTCTTAAAGGATCAGAAATATTTGATCGTATTGGATGATGTTTGGGTACCAGAAGCAGTCAATGACTTGTTCGGAGCACTTGTCTCAAATCTCAGCAGGAGCAGAGTTCTTGTGACAACACGCATTGATGGTGTTGCTCACCAGACAAGAGGATAA
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| Protein seq | MAEAVILLTVKKIGVALGNEAINQATSYFKKSVTQLTELQGSMGCIRRELRLMHEFLSGMDVRNRNNRKYEIWVEEVRMLVYQIEDIVDDYLHLVGHKHHIGWGTYLKKGFRRPNVLLSLNKITSLVKDVEASLVHLFQAKERWVFMDVGAATGGESSSYIVVEKSRHLASISRSLDEEDLVGVDGNKKKLHEWLSSNELQRDVIVVHGMGGLGKTALAADVYKSEKEKFECHAWVSISQTYSIKAVLKCLINELDEKKSIRGNISDMDTGGLQDELKKFLKDQKYLIVLDDVWVPEAVNDLFGALVSNLSRSRVLVTTRIDGVAHQTRG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.1410005 | 0.0522 | 0.3652125 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0678400 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45330 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0678400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024440 | RBH | 0.0 | 4.865353 | 1.984355 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023640 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023180 | SBH | 0.033781 | 12.385487 | 0.134590 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023810 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022270 | SBH | 0.000000 | 4.678591 | 2.442099 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0418200 | SBH | 0.0914695 | 0.017517 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0025020 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0338900 | SBH | 0.7873095 | 5.0799875 | 3.081101 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0025060 | RBH | 0.0 | 0.232610 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0021260 | SBH | 1.197696 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0024300 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023180 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0008100 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023460 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023910 | SBH | 0.0 | 0.0 | 0.0 |
