Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_11G0426800		OGI:11076970 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr11:30385144-30389232		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		GTAGGGCCCTACCTACTGGGAGCTCCTTTGAAATTCCAACAGGCTAGTTGCTTTTCAACTTCAATGGTCAAAGTTATATAGTCTTGTCTTCAAAGAAACAAAAAATATTATCTTCTATGCAGAAGAGAATCCTGAAGAATTCTAGCTATGTAGATAGTGGCTGCTTGTGTTCAAGCAAGGAACAAACAGAGAGAAGTATGGCGCTATGGAATGGCTTGGGTCAGGTGGCCAACATTGCGCAGCTTGCCGGGGTAGATGCATATGGGCTCATCAAGATGATCGTGGAGGCTGCGCAGACAGCTAAAAGGAACCAGGAGACCTGCCAGAAGCTAGCACGGCATGTGAAGATGATCGGCGACCTGCTGCAGCGACTCCAAAGCACAGAGCTTATGCAGCATCAAGAAACGAGGAACCCGGTGGAGCAGCTGGAGGAGACGCTCCGACACACCTACATGGTCATCTTGTCCTGTCAGGACAGCAGCTACCTGCACAGCTGCTTCATGGGAGGGAAGCAGGCTCACCAGCTGCGCGAGGTGCAGAGTGATATCACCTTCTACCTCCAGCTCTTCCCTCTTGTCAGCTTTGTTAACACGACCCGTACCTGGGAGCGGCTTCTGAGAAGAGCTCAACCTTCTTGCACTGAGGTACATGGTTTGTCTTTCTTTTCTCTCCTTCAAGCAAGTCAGTGGAAAGGGGATTAAAATGTATAAGTTCGATGATGCATGTTAATCAAAGATTCCATTTAATAGGAGACATCCTCAGATTAGTTATGATGCCACTACTGAGAATGAGAAGCATGGAAAGAACTCTGGTTCTAGAGATGCAGTAAAATGTGATAGTTCCTCTTAATGTCAAAGTTCATACCAGCTCCTTGCTGGAAAATGTTTCTTATCATGCCAGTTCCTTGCTCTAATTTGTTTTGATTATCTTCTTAATTATCTATTCAAGAGAAACTTTGTCGCGGGGATCTTGTTCTTATCTTTATTAATTTTTGGTTACTCTCACAGGATACTGCAGATGAGTTACAAAAAGTACATCATTCAGAGCATAGAATTAGGTACGTTATATCAATACTGCACCCATTTTATGCCAAGCTCATGTTGCATTCGATTTTCCTGTGCTTTTAAGACATCATACACCAACTTTTTTTTTCCTCATTATTTCATTCAAGATGTAGATGAAAGATGAACAAAATACTCACAGCGTGAAAAAAGAACTATTGGGCAACATGCTCTTTTCGAATTATCGCCGATCAGGGATTTTGTGATGATTACTTTATATCATCCTTATGGCTTATGTTCCTTTGCAGAACTTGCCATAGTACTACTGCGGTTGATCCAAACCTACTTGTGAATTATGATATAGTAATAAGGTGTTCTTGCTAATGTTTACAAGGAACCATGTACAGGACTATGCACACAAATACATTAAGCTGATTGAGTTACATTGGCAATTTATATTCAGGTACCAACATAGATGTCATGGTGGATGCACTAGTTACTCTAGGGTGTTACAAATGAATGGCAGCATCTTTATATCCATTTATAGGTGTATCATTTTGACATACTAATTTGGTACTATATGATCAGATTCAACACAGAAATTCTTAACGCGACTGAATTTGGTGATCAGAGTGTAACTCAATGTCCAGAAGTTTTTGAGGAAAAACGAAGTGAACAAACATCAAGTATGTCAATTTGCAACAATTTTGTTTTATTTTTGTCTATTATGATTGACAAGATATAGTTTTTTAATCAATCAGTCAGAAGCCTGAACCTGGATCAACTAGTTGTTAATGATATTGGAAAAGGAGCAGTGTTGACTTTTTCACAGATATTGGCTGCTACAAACAATTTTTCAGGGAGATCCTTAATTGGACAAGGTGGATTTGGGCCTGTTTACAAGGTACTCCGTAGTTCTCTTCAAAAGTAAACCTTAGGAGTTAGGATGAAGAAAATCCTGAACTTTTGAAGAAATAGTAATATTAGAATTCTAAATTTGCAGTTCTTACACTCGCTGTATCAAATGAAAATTTTTTCAGCCAATAATTTTAATCTCACCCACATAACTAATCTTTCTATAATATTTTTTTTCCATAACAGCAGTACATAAATAATGCGGATAGGATATTTTGAAAAATTTCAGCTCCTCCCATGATCTTGCTTTAGAACATGTTGTCATGTCAGCTTCTTGTAACATGTATAACATCCAGGAATGCTTTTTATGGCATTATCTAGAAAATCTATGAATGCTTTGAATATGCGCATATCTGAATATTTTGATTTACAATGCTTAGATGTGCTTTATTAATCTGAATTTAAACTTTCTCAGGGAAAACTTCCCAATGGACTTGAGATTGCCGTCAAAAGGCATGATACTTCTTCACATCAAGGTGAAGAAGAGTTCATGGCTGAGATTGACGTCATACCAAAACTTCGACGAAAAAATATAATTGAGCTGATTGGGTTTTGTGTTCAAGGCAAAGAATGTATTCTTGTCTATGAATACATTCCAAATGGAAGTTTGGCTTCTACCATTAGCGGCAAGTTTTCTATTTTGACTAAGACCAATGCCTCCATTTTTTTTCTCTAAATGATATCTGGTATTTTTGTAGATGAAACAAAAAGGATATTGCTAAATTGGTCTAAGCGCCTTAAAATAATTGAAGGAATCTCAGATGGTCTTCTTTACCTACACAACCATTCTCCCAAGTGCATTGTCCATAGGGACATAAAAGCAAGTAATATCCTCTTAGATTATGAAATGAATGCTAAGATTTCTGATTTTGGTCTGGCCATAAAATTAGCTCCGAAAGCAACTACAGAGGTGCTTGTTCGTGGCACATGGTAGATACTCTCCCAGTCTCCCTATACTGTAAACTAGTTAGAGATGCAACTCTCATCTTTCCCTTGATAAGTGTAGCTACAGGTGCACTGCTGTGACGATCTACTGTCATCTTTCAGGGGTTATGCCGATCCTGAATATGTTGCTACTGGAGTAATCTCGGAGAAAACCGACGTTTATAGCTTTGGCATTGTACTGCTTGAGATAATAAGTGGAAAGTTGTGTGTATCTGGATATAATGTGAAGAGCAGATCTCGACGAACAATATTTCCTGAATTTGTAAGTATTCCATAACTGCACCTCTATTTTTATCAATGTTCTAAGGGTGAATGGTGGTATCTTCTTATTAGAAAATGTGAAAATGGTACTACTCTCTGGTAGTGTGGTTGATAAATTCCAACCTGTTCATGCAAACTTTCCTCAGTTCCTGCCTGAACTGCCCTTTTTTTATGTTTCTGTAAGATTAAGATATTTTAAATTTTCATATGTTGCTCTTTAATATTCTGATAATCTTTTCAGGCACTGAAGAACAGAAAAAAGTTGCACAAGCTTATTGATCCATCATTAGGTGCTAAGAAACATGAGCGAGCTCAGATTATGCAATGTCTTAGGGTGGCGATGTTGTGCGTTCGGGATCGCGCTGAACATCGGCCTACCATGTCTGAAGTTGTTACTATGCTTCCTAGCATCAAGACACCGAAAGACAGAAAGGTACAAGCACTGTTTCTGTCCAAGTTATGCTTGGATTGCACATGAAAATACTGAATGGCATTTGCTCTCTTTCTGTTTGTTAATTAGGACGCTCTATTTCTTTGCAGACCTACTTATCTACTGGTTGGGAACGGACTTGGATGCATGGTTGTTTAGGCTGTTAAAACAGTTGTCTACTGTCATGTGTCAATGTGTGTACCGTTAATCCCAGAGATGACAGACATATGTAGCTACTGTTAAGCTTGATGTTTAACTCTGATGCTCATGTGTTAAGCCGTTTAGGCAGTTGTCAACGTGCGCTTTTGATGCACAAATTGACCATTAGGTGCTCCAGGGACGAGATATAAGATACATATGCTTGAAGACAACATTGGAATCACATGTAAAGTTTTGCAAGAAAAAAATGAAAGAAAGAACTCATGGCCCATGAATGCATTGTGCAACAACTAATTAATTTCCCCTCTCTTATTCAGGGATGAAAAAGCCCATCTGCATAGGGCTCTGGCCTCTGGAAATTGCTCAACCTTCTATCAC More
CDS seq		ATGCAGAAGAGAATCCTGAAGAATTCTAGCTATGTAGATAGTGGCTGCTTGTGTTCAAGCAAGGAACAAACAGAGAGAAGTATGGCGCTATGGAATGGCTTGGGTCAGGTGGCCAACATTGCGCAGCTTGCCGGGGTAGATGCATATGGGCTCATCAAGATGATCGTGGAGGCTGCGCAGACAGCTAAAAGGAACCAGGAGACCTGCCAGAAGCTAGCACGGCATGTGAAGATGATCGGCGACCTGCTGCAGCGACTCCAAAGCACAGAGCTTATGCAGCATCAAGAAACGAGGAACCCGGTGGAGCAGCTGGAGGAGACGCTCCGACACACCTACATGGTCATCTTGTCCTGTCAGGACAGCAGCTACCTGCACAGCTGCTTCATGGGAGGGAAGCAGGCTCACCAGCTGCGCGAGGTGCAGAGTGATATCACCTTCTACCTCCAGCTCTTCCCTCTTGTCAGCTTTGTTAACACGACCCGTACCTGGGAGCGGCTTCTGAGAAGAGCTCAACCTTCTTGCACTGAGGATACTGCAGATGAGTTACAAAAAGTACATCATTCAGAGCATAGAATTAGATTCAACACAGAAATTCTTAACGCGACTGAATTTGGTGATCAGAGTGTAACTCAATGTCCAGAAGTTTTTGAGGAAAAACGAAGTGAACAAACATCAATCAGAAGCCTGAACCTGGATCAACTAGTTGTTAATGATATTGGAAAAGGAGCAGTGTTGACTTTTTCACAGATATTGGCTGCTACAAACAATTTTTCAGGGAGATCCTTAATTGGACAAGGTGGATTTGGGCCTGTTTACAAGGGAAAACTTCCCAATGGACTTGAGATTGCCGTCAAAAGGCATGATACTTCTTCACATCAAGGTGAAGAAGAGTTCATGGCTGAGATTGACGTCATACCAAAACTTCGACGAAAAAATATAATTGAGCTGATTGGGTTTTGTGTTCAAGGCAAAGAATGTATTCTTGTCTATGAATACATTCCAAATGGAAGTTTGGCTTCTACCATTAGCGATGAAACAAAAAGGATATTGCTAAATTGGTCTAAGCGCCTTAAAATAATTGAAGGAATCTCAGATGGTCTTCTTTACCTACACAACCATTCTCCCAAGTGCATTGTCCATAGGGACATAAAAGCAAGTAATATCCTCTTAGATTATGAAATGAATGCTAAGATTTCTGATTTTGGTCTGGCCATAAAATTAGCTCCGAAAGCAACTACAGAGGTGCTTGTTCGTGGCACATGGGGTTATGCCGATCCTGAATATGTTGCTACTGGAGTAATCTCGGAGAAAACCGACGTTTATAGCTTTGGCATTGTACTGCTTGAGATAATAAGTGGAAAGTTGTGTGTATCTGGATATAATGTGAAGAGCAGATCTCGACGAACAATATTTCCTGAATTTGCACTGAAGAACAGAAAAAAGTTGCACAAGCTTATTGATCCATCATTAGGTGCTAAGAAACATGAGCGAGCTCAGATTATGCAATGTCTTAGGGTGGCGATGTTGTGCGTTCGGGATCGCGCTGAACATCGGCCTACCATGTCTGAAGTTGTTACTATGCTTCCTAGCATCAAGACACCGAAAGACAGAAAGACCTACTTATCTACTGGTTGGGAACGGACTTGGATGCATGGTTGTTTAGGCTGTTAA More
Protein seq		MQKRILKNSSYVDSGCLCSSKEQTERSMALWNGLGQVANIAQLAGVDAYGLIKMIVEAAQTAKRNQETCQKLARHVKMIGDLLQRLQSTELMQHQETRNPVEQLEETLRHTYMVILSCQDSSYLHSCFMGGKQAHQLREVQSDITFYLQLFPLVSFVNTTRTWERLLRRAQPSCTEDTADELQKVHHSEHRIRFNTEILNATEFGDQSVTQCPEVFEEKRSEQTSIRSLNLDQLVVNDIGKGAVLTFSQILAATNNFSGRSLIGQGGFGPVYKGKLPNGLEIAVKRHDTSSHQGEEEFMAEIDVIPKLRRKNIIELIGFCVQGKECILVYEYIPNGSLASTISDETKRILLNWSKRLKIIEGISDGLLYLHNHSPKCIVHRDIKASNILLDYEMNAKISDFGLAIKLAPKATTEVLVRGTWGYADPEYVATGVISEKTDVYSFGIVLLEIISGKLCVSGYNVKSRSRRTIFPEFALKNRKKLHKLIDPSLGAKKHERAQIMQCLRVAMLCVRDRAEHRPTMSEVVTMLPSIKTPKDRKTYLSTGWERTWMHGCLGC
Function		Cysteine-rich receptor-like protein kinase 19 [UniProtKB/Swiss-Prot:Q8GWJ7]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_11G0426800	OsZS97_11T0426800.1	Chr11	30385144	30389232	+	makerRMon
CDS seq	ATGGCGCTATGGAATGGCTTGGGTCAGGTGGCCAACATTGCGCAGCTTGCCGGGGTAGATGCATATGGGCTCATCAAGATGATCGTGGAGGCTGCGCAGACAGCTAAAAGGAACCAGGAGACCTGCCAGAAGCTAGCACGGCATGTGAAGATGATCGGCGACCTGCTGCAGCGACTCCAAAGCACAGAGCTTATGCAGCATCAAGAAACGAGGAACCCGGTGGAGCAGCTGGAGGAGACGCTCCGACACACCTACATGGTCATCTTGTCCTGTCAGGACAGCAGCTACCTGCACAGCTGCTTCATGGGAGGGAAGCAGGCTCACCAGCTGCGCGAGGTGCAGAGTGATATCACCTTCTACCTCCAGCTCTTCCCTCTTGTCAGCTTTGTTAACACGACCCGTACCTGGGAGCGGCTTCTGAGAAGAGCTCAACCTTCTTGCACTGAGGATACTGCAGATGAGTTACAAAAAGTACATCATTCAGAGCATAGAATTAGATTCAACACAGAAATTCTTAACGCGACTGAATTTGGTGATCAGAGTGTAACTCAATGTCCAGAAGTTTTTGAGGAAAAACGAAGTGAACAAACATCAATCAGAAGCCTGAACCTGGATCAACTAGTTGTTAATGATATTGGAAAAGGAGCAGTGTTGACTTTTTCACAGATATTGGCTGCTACAAACAATTTTTCAGGGAGATCCTTAATTGGACAAGGTGGATTTGGGCCTGTTTACAAGGGAAAACTTCCCAATGGACTTGAGATTGCCGTCAAAAGGCATGATACTTCTTCACATCAAGGTGAAGAAGAGTTCATGGCTGAGATTGACGTCATACCAAAACTTCGACGAAAAAATATAATTGAGCTGATTGGGTTTTGTGTTCAAGGCAAAGAATGTATTCTTGTCTATGAATACATTCCAAATGGAAGTTTGGCTTCTACCATTAGCGATGAAACAAAAAGGATATTGCTAAATTGGTCTAAGCGCCTTAAAATAATTGAAGGAATCTCAGATGGTCTTCTTTACCTACACAACCATTCTCCCAAGTGCATTGTCCATAGGGACATAAAAGCAAGTAATATCCTCTTAGATTATGAAATGAATGCTAAGATTTCTGATTTTGGTCTGGCCATAAAATTAGCTCCGAAAGCAACTACAGAGGTGCTTGTTCGTGGCACATGGGGTTATGCCGATCCTGAATATGTTGCTACTGGAGTAATCTCGGAGAAAACCGACGTTTATAGCTTTGGCATTGTACTGCTTGAGATAATAAGTGGAAAGTTGTGTGTATCTGGATATAATGTGAAGAGCAGATCTCGACGAACAATATTTCCTGAATTTGCACTGAAGAACAGAAAAAAGTTGCACAAGCTTATTGATCCATCATTAGGTGCTAAGAAACATGAGCGAGCTCAGATTATGCAATGTCTTAGGGTGGCGATGTTGTGCGTTCGGGATCGCGCTGAACATCGGCCTACCATGTCTGAAGTTGTTACTATGCTTCCTAGCATCAAGACACCGAAAGACAGAAAGACCTACTTATCTACTGGTTGGGAACGGACTTGGATGCATGGTTGTTTAGGCTGTTAA More
Protein seq	MALWNGLGQVANIAQLAGVDAYGLIKMIVEAAQTAKRNQETCQKLARHVKMIGDLLQRLQSTELMQHQETRNPVEQLEETLRHTYMVILSCQDSSYLHSCFMGGKQAHQLREVQSDITFYLQLFPLVSFVNTTRTWERLLRRAQPSCTEDTADELQKVHHSEHRIRFNTEILNATEFGDQSVTQCPEVFEEKRSEQTSIRSLNLDQLVVNDIGKGAVLTFSQILAATNNFSGRSLIGQGGFGPVYKGKLPNGLEIAVKRHDTSSHQGEEEFMAEIDVIPKLRRKNIIELIGFCVQGKECILVYEYIPNGSLASTISDETKRILLNWSKRLKIIEGISDGLLYLHNHSPKCIVHRDIKASNILLDYEMNAKISDFGLAIKLAPKATTEVLVRGTWGYADPEYVATGVISEKTDVYSFGIVLLEIISGKLCVSGYNVKSRSRRTIFPEFALKNRKKLHKLIDPSLGAKKHERAQIMQCLRVAMLCVRDRAEHRPTMSEVVTMLPSIKTPKDRKTYLSTGWERTWMHGCLGC More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_11G0426800	OsZS97_11T0426800.2	Chr11	30385144	30389232	+	makerRMon
CDS seq	ATGGCGCTATGGAATGGCTTGGGTCAGGTGGCCAACATTGCGCAGCTTGCCGGGGTAGATGCATATGGGCTCATCAAGATGATCGTGGAGGCTGCGCAGACAGCTAAAAGGAACCAGGAGACCTGCCAGAAGCTAGCACGGCATGTGAAGATGATCGGCGACCTGCTGCAGCGACTCCAAAGCACAGAGCTTATGCAGCATCAAGAAACGAGGAACCCGGTGGAGCAGCTGGAGGAGACGCTCCGACACACCTACATGGTCATCTTGTCCTGTCAGGACAGCAGCTACCTGCACAGCTGCTTCATGGGAGGGAAGCAGGCTCACCAGCTGCGCGAGGTGCAGAGTGATATCACCTTCTACCTCCAGCTCTTCCCTCTTGTCAGCTTTGTTAACACGACCCGTACCTGGGAGCGGCTTCTGAGAAGAGCTCAACCTTCTTGCACTGAGGATACTGCAGATGAGTTACAAAAAGTACATCATTCAGAGCATAGAATTAGATTCAACACAGAAATTCTTAACGCGACTGAATTTGGTGATCAGAGTGTAACTCAATGTCCAGAAGTTTTTGAGGAAAAACGAAGTGAACAAACATCAATCAGAAGCCTGAACCTGGATCAACTAGTTGTTAATGATATTGGAAAAGGAGCAGTGTTGACTTTTTCACAGATATTGGCTGCTACAAACAATTTTTCAGGGAGATCCTTAATTGGACAAGGTGGATTTGGGCCTGTTTACAAGGGAAAACTTCCCAATGGACTTGAGATTGCCGTCAAAAGGCATGATACTTCTTCACATCAAGGTGAAGAAGAGTTCATGGCTGAGATTGACGTCATACCAAAACTTCGACGAAAAAATATAATTGAGCTGATTGGGTTTTGTGTTCAAGGCAAAGAATGTATTCTTGTCTATGAATACATTCCAAATGGAAGTTTGGCTTCTACCATTAGCGATGAAACAAAAAGGATATTGCTAAATTGGTCTAAGCGCCTTAAAATAATTGAAGGAATCTCAGATGGTCTTCTTTACCTACACAACCATTCTCCCAAGTGCATTGTCCATAGGGACATAAAAGCAAGTAATATCCTCTTAGATTATGAAATGAATGCTAAGATTTCTGATTTTGGTCTGGCCATAAAATTAGCTCCGAAAGCAACTACAGAGGTGCTTGTTCGTGGCACATGGTAG More
Protein seq	MALWNGLGQVANIAQLAGVDAYGLIKMIVEAAQTAKRNQETCQKLARHVKMIGDLLQRLQSTELMQHQETRNPVEQLEETLRHTYMVILSCQDSSYLHSCFMGGKQAHQLREVQSDITFYLQLFPLVSFVNTTRTWERLLRRAQPSCTEDTADELQKVHHSEHRIRFNTEILNATEFGDQSVTQCPEVFEEKRSEQTSIRSLNLDQLVVNDIGKGAVLTFSQILAATNNFSGRSLIGQGGFGPVYKGKLPNGLEIAVKRHDTSSHQGEEEFMAEIDVIPKLRRKNIIELIGFCVQGKECILVYEYIPNGSLASTISDETKRILLNWSKRLKIIEGISDGLLYLHNHSPKCIVHRDIKASNILLDYEMNAKISDFGLAIKLAPKATTEVLVRGTW More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_11G0426800	OsZS97_11T0426800.3	Chr11	30385183	30389232	+	makerRMon
CDS seq	ATGCAGAAGAGAATCCTGAAGAATTCTAGCTATGTAGATAGTGGCTGCTTGTGTTCAAGCAAGGAACAAACAGAGAGAAGTATGGCGCTATGGAATGGCTTGGGTCAGGTGGCCAACATTGCGCAGCTTGCCGGGGTAGATGCATATGGGCTCATCAAGATGATCGTGGAGGCTGCGCAGACAGCTAAAAGGAACCAGGAGACCTGCCAGAAGCTAGCACGGCATGTGAAGATGATCGGCGACCTGCTGCAGCGACTCCAAAGCACAGAGCTTATGCAGCATCAAGAAACGAGGAACCCGGTGGAGCAGCTGGAGGAGACGCTCCGACACACCTACATGGTCATCTTGTCCTGTCAGGACAGCAGCTACCTGCACAGCTGCTTCATGGGAGGGAAGCAGGCTCACCAGCTGCGCGAGGTGCAGAGTGATATCACCTTCTACCTCCAGCTCTTCCCTCTTGTCAGCTTTGTTAACACGACCCGTACCTGGGAGCGGCTTCTGAGAAGAGCTCAACCTTCTTGCACTGAGGATACTGCAGATGAGTTACAAAAAGTACATCATTCAGAGCATAGAATTAGATTCAACACAGAAATTCTTAACGCGACTGAATTTGGTGATCAGAGTGTAACTCAATGTCCAGAAGTTTTTGAGGAAAAACGAAGTGAACAAACATCAATCAGAAGCCTGAACCTGGATCAACTAGTTGTTAATGATATTGGAAAAGGAGCAGTGTTGACTTTTTCACAGATATTGGCTGCTACAAACAATTTTTCAGGGAGATCCTTAATTGGACAAGGTGGATTTGGGCCTGTTTACAAGGGAAAACTTCCCAATGGACTTGAGATTGCCGTCAAAAGGCATGATACTTCTTCACATCAAGGTGAAGAAGAGTTCATGGCTGAGATTGACGTCATACCAAAACTTCGACGAAAAAATATAATTGAGCTGATTGGGTTTTGTGTTCAAGGCAAAGAATGTATTCTTGTCTATGAATACATTCCAAATGGAAGTTTGGCTTCTACCATTAGCGATGAAACAAAAAGGATATTGCTAAATTGGTCTAAGCGCCTTAAAATAATTGAAGGAATCTCAGATGGTCTTCTTTACCTACACAACCATTCTCCCAAGTGCATTGTCCATAGGGACATAAAAGCAAGTAATATCCTCTTAGATTATGAAATGAATGCTAAGATTTCTGATTTTGGTCTGGCCATAAAATTAGCTCCGAAAGCAACTACAGAGGTGCTTGTTCGTGGCACATGGGGTTATGCCGATCCTGAATATGTTGCTACTGGAGTAATCTCGGAGAAAACCGACGTTTATAGCTTTGGCATTGTACTGCTTGAGATAATAAGTGGAAAGTTGTGTGTATCTGGATATAATGTGAAGAGCAGATCTCGACGAACAATATTTCCTGAATTTGCACTGAAGAACAGAAAAAAGTTGCACAAGCTTATTGATCCATCATTAGGTGCTAAGAAACATGAGCGAGCTCAGATTATGCAATGTCTTAGGGTGGCGATGTTGTGCGTTCGGGATCGCGCTGAACATCGGCCTACCATGTCTGAAGTTGTTACTATGCTTCCTAGCATCAAGACACCGAAAGACAGAAAGACCTACTTATCTACTGGTTGGGAACGGACTTGGATGCATGGTTGTTTAGGCTGTTAA More
Protein seq	MQKRILKNSSYVDSGCLCSSKEQTERSMALWNGLGQVANIAQLAGVDAYGLIKMIVEAAQTAKRNQETCQKLARHVKMIGDLLQRLQSTELMQHQETRNPVEQLEETLRHTYMVILSCQDSSYLHSCFMGGKQAHQLREVQSDITFYLQLFPLVSFVNTTRTWERLLRRAQPSCTEDTADELQKVHHSEHRIRFNTEILNATEFGDQSVTQCPEVFEEKRSEQTSIRSLNLDQLVVNDIGKGAVLTFSQILAATNNFSGRSLIGQGGFGPVYKGKLPNGLEIAVKRHDTSSHQGEEEFMAEIDVIPKLRRKNIIELIGFCVQGKECILVYEYIPNGSLASTISDETKRILLNWSKRLKIIEGISDGLLYLHNHSPKCIVHRDIKASNILLDYEMNAKISDFGLAIKLAPKATTEVLVRGTWGYADPEYVATGVISEKTDVYSFGIVLLEIISGKLCVSGYNVKSRSRRTIFPEFALKNRKKLHKLIDPSLGAKKHERAQIMQCLRVAMLCVRDRAEHRPTMSEVVTMLPSIKTPKDRKTYLSTGWERTWMHGCLGC More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_11G0426800	OsZS97_11T0426800.4	Chr11	30385144	30389232	+	makerRMon
CDS seq	ATGCAGAAGAGAATCCTGAAGAATTCTAGCTATGTAGATAGTGGCTGCTTGTGTTCAAGCAAGGAACAAACAGAGAGAAGTATGGCGCTATGGAATGGCTTGGGTCAGGTGGCCAACATTGCGCAGCTTGCCGGGGTAGATGCATATGGGCTCATCAAGATGATCGTGGAGGCTGCGCAGACAGCTAAAAGGAACCAGGAGACCTGCCAGAAGCTAGCACGGCATGTGAAGATGATCGGCGACCTGCTGCAGCGACTCCAAAGCACAGAGCTTATGCAGCATCAAGAAACGAGGAACCCGGTGGAGCAGCTGGAGGAGACGCTCCGACACACCTACATGGTCATCTTGTCCTGTCAGGACAGCAGCTACCTGCACAGCTGCTTCATGGGAGGGAAGCAGGCTCACCAGCTGCGCGAGGTGCAGAGTGATATCACCTTCTACCTCCAGCTCTTCCCTCTTGTCAGCTTTGTTAACACGACCCGTACCTGGGAGCGGCTTCTGAGAAGAGCTCAACCTTCTTGCACTGAGGATACTGCAGATGAGTTACAAAAAGTACATCATTCAGAGCATAGAATTAGATTCAACACAGAAATTCTTAACGCGACTGAATTTGGTGATCAGAGTGTAACTCAATGTCCAGAAGTTTTTGAGGAAAAACGAAGTGAACAAACATCAATCAGAAGCCTGAACCTGGATCAACTAGTTGTTAATGATATTGGAAAAGGAGCAGTGTTGACTTTTTCACAGATATTGGCTGCTACAAACAATTTTTCAGGGAGATCCTTAATTGGACAAGGTGGATTTGGGCCTGTTTACAAGGGAAAACTTCCCAATGGACTTGAGATTGCCGTCAAAAGGCATGATACTTCTTCACATCAAGGTGAAGAAGAGTTCATGGCTGAGATTGACGTCATACCAAAACTTCGACGAAAAAATATAATTGAGCTGATTGGGTTTTGTGTTCAAGGCAAAGAATGTATTCTTGTCTATGAATACATTCCAAATGGAAGTTTGGCTTCTACCATTAGCGGGGTTATGCCGATCCTGAATATGTTGCTACTGGAGTAA More
Protein seq	MQKRILKNSSYVDSGCLCSSKEQTERSMALWNGLGQVANIAQLAGVDAYGLIKMIVEAAQTAKRNQETCQKLARHVKMIGDLLQRLQSTELMQHQETRNPVEQLEETLRHTYMVILSCQDSSYLHSCFMGGKQAHQLREVQSDITFYLQLFPLVSFVNTTRTWERLLRRAQPSCTEDTADELQKVHHSEHRIRFNTEILNATEFGDQSVTQCPEVFEEKRSEQTSIRSLNLDQLVVNDIGKGAVLTFSQILAATNNFSGRSLIGQGGFGPVYKGKLPNGLEIAVKRHDTSSHQGEEEFMAEIDVIPKLRRKNIIELIGFCVQGKECILVYEYIPNGSLASTISGVMPILNMLLLE More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_11G0426800	OsZS97_11T0426800.5	Chr11	30385144	30389232	+	makerRMon
CDS seq	ATGGCGCTATGGAATGGCTTGGGTCAGGTGGCCAACATTGCGCAGCTTGCCGGGGTAGATGCATATGGGCTCATCAAGATGATCGTGGAGGCTGCGCAGACAGCTAAAAGGAACCAGGAGACCTGCCAGAAGCTAGCACGGCATGTGAAGATGATCGGCGACCTGCTGCAGCGACTCCAAAGCACAGAGCTTATGCAGCATCAAGAAACGAGGAACCCGGTGGAGCAGCTGGAGGAGACGCTCCGACACACCTACATGGTCATCTTGTCCTGTCAGGACAGCAGCTACCTGCACAGCTGCTTCATGGGAGGGAAGCAGGCTCACCAGCTGCGCGAGGTGCAGAGTGATATCACCTTCTACCTCCAGCTCTTCCCTCTTGTCAGCTTTGTTAACACGACCCGTACCTGGGAGCGGCTTCTGAGAAGAGCTCAACCTTCTTGCACTGAGGATACTGCAGATGAGTTACAAAAAGTACATCATTCAGAGCATAGAATTAGATTCAACACAGAAATTCTTAACGCGACTGAATTTGGTGATCAGAGTGTAACTCAATGTCCAGAAGTTTTTGAGGAAAAACGAAGTGAACAAACATCAATCAGAAGCCTGAACCTGGATCAACTAGTTGTTAATGATATTGGAAAAGGAGCAGTGTTGACTTTTTCACAGATATTGGCTGCTACAAACAATTTTTCAGGGAGATCCTTAATTGGACAAGGTGGATTTGGGCCTGTTTACAAGGGAAAACTTCCCAATGGACTTGAGATTGCCGTCAAAAGGCATGATACTTCTTCACATCAAGGTGAAGAAGAGTTCATGGCTGAGATTGACGTCATACCAAAACTTCGACGAAAAAATATAATTGAGCTGATTGGGTTTTGTGTTCAAGGCAAAGAATGTATTCTTGTCTATGAATACATTCCAAATGGAAGTTTGGCTTCTACCATTAGCGGCAAGTTTTCTATTTTGACTAAGACCAATGCCTCCATTTTTTTTCTCTAA More
Protein seq	MALWNGLGQVANIAQLAGVDAYGLIKMIVEAAQTAKRNQETCQKLARHVKMIGDLLQRLQSTELMQHQETRNPVEQLEETLRHTYMVILSCQDSSYLHSCFMGGKQAHQLREVQSDITFYLQLFPLVSFVNTTRTWERLLRRAQPSCTEDTADELQKVHHSEHRIRFNTEILNATEFGDQSVTQCPEVFEEKRSEQTSIRSLNLDQLVVNDIGKGAVLTFSQILAATNNFSGRSLIGQGGFGPVYKGKLPNGLEIAVKRHDTSSHQGEEEFMAEIDVIPKLRRKNIIELIGFCVQGKECILVYEYIPNGSLASTISGKFSILTKTNASIFFL More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_11G0426800	OsZS97_11T0426800.6	Chr11	30385144	30389232	+	makerRMon
CDS seq	ATGGCGCTATGGAATGGCTTGGGTCAGGTGGCCAACATTGCGCAGCTTGCCGGGGTAGATGCATATGGGCTCATCAAGATGATCGTGGAGGCTGCGCAGACAGCTAAAAGGAACCAGGAGACCTGCCAGAAGCTAGCACGGCATGTGAAGATGATCGGCGACCTGCTGCAGCGACTCCAAAGCACAGAGCTTATGCAGCATCAAGAAACGAGGAACCCGGTGGAGCAGCTGGAGGAGACGCTCCGACACACCTACATGGTCATCTTGTCCTGTCAGGACAGCAGCTACCTGCACAGCTGCTTCATGGGAGGGAAGCAGGCTCACCAGCTGCGCGAGGTGCAGAGTGATATCACCTTCTACCTCCAGCTCTTCCCTCTTGTCAGCTTTGTTAACACGACCCGTACCTGGGAGCGGCTTCTGAGAAGAGCTCAACCTTCTTGCACTGAGGATACTGCAGATGAGTTACAAAAAGTACATCATTCAGAGCATAGAATTAGATTCAACACAGAAATTCTTAACGCGACTGAATTTGGTGATCAGAGTGTAACTCAATGTCCAGAAGTTTTTGAGGAAAAACGAAGTGAACAAACATCAAGGAGATCCTTAATTGGACAAGGTGGATTTGGGCCTGTTTACAAGGGAAAACTTCCCAATGGACTTGAGATTGCCGTCAAAAGGCATGATACTTCTTCACATCAAGGTGAAGAAGAGTTCATGGCTGAGATTGACGTCATACCAAAACTTCGACGAAAAAATATAATTGAGCTGATTGGGTTTTGTGTTCAAGGCAAAGAATGTATTCTTGTCTATGAATACATTCCAAATGGAAGTTTGGCTTCTACCATTAGCGGCAAGTTTTCTATTTTGACTAAGACCAATGCCTCCATTTTTTTTCTCTAA More
Protein seq	MALWNGLGQVANIAQLAGVDAYGLIKMIVEAAQTAKRNQETCQKLARHVKMIGDLLQRLQSTELMQHQETRNPVEQLEETLRHTYMVILSCQDSSYLHSCFMGGKQAHQLREVQSDITFYLQLFPLVSFVNTTRTWERLLRRAQPSCTEDTADELQKVHHSEHRIRFNTEILNATEFGDQSVTQCPEVFEEKRSEQTSRRSLIGQGGFGPVYKGKLPNGLEIAVKRHDTSSHQGEEEFMAEIDVIPKLRRKNIIELIGFCVQGKECILVYEYIPNGSLASTISGKFSILTKTNASIFFL More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.4618125	5.355208	0.4538285

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_11g0670100	RBH	0.0	0.0	0.0
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os11g44750	SBH	0.000000	0.0	0.000000
Nipponbare \| IRGSP 1.0 \| RAP-db	Os11g0670100	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_11g0023150	RBH	0.000000	0.000000	0.000000
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_11g0023250	SBH	0.0	0.0	0.000000
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_11g0022890	SBH	0.0	0.0	0.231583
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_11g0022560	SBH	0.000000	0.000000	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_11g0022880	SBH	0.000000	0.0	0.987473
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_11G0407400	RBH	0.0359625	0.621633	0.0343445
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_11g0023710	SBH	0.0	0.0	0.014827
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_11G0426500	RBH	0.046493	0.3637625	0.0500025
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_11g0023520	SBH	0.0	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_11g0023630	SBH	0.0	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_11g0023050	SBH	0.0	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_11g0022750	SBH	0.669859	0.0	0.037494
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_11g0022840	SBH	0.0	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_11G023100	SBH	0.000000	0.0	0.000000
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_11g0023500	SBH	0.0	0.000000	0.000000

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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