Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0422900 | OGI:11075910 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:30013696-30015239 | ||||||||
| Gene Symbol | RLCK348, OsRLCK348, - | ||||||||||
| DNA seq | ATGTGGAGCGGGATGGGGCAGGCGGCGACGGTGGCGCAGCTGGTCGGCGCAGACGTCGGCAGGCTCATCTCTCCATGATCATGCAGGCGGCGTTGACGGCTCAGCGGAACAAGAAGGAGTGCGAGCAGCTCGCTCGCCGCGTGTTCATGATCGCCGAGCTGCTGCCGTACCTGCAGGACCCGGAGGTGATGCGGCGGCCGGAGGTCCGGCGGTCGCTGGCCGGGCTCGGCGACACACTCCGGGAGGCGCACGAGCTTGCGATGTCCTGTCAGGGCATGACCATGGTGTACCGGTTGGTGACAGCCGGGCGGCAAGCTGACAAGTTCAGAGCAGGATCGACTCATACCTCCTCGTCTTCCCCTTCGATCATCAGCCACATCTACATCACTCGTCGTCTCGATCGAATCTACAACATCCTTCTTCCGAACGACATGTCCACTATGCCGTCTCCATCTTCAGGCTCCCACTCTCATGAGGTGGTACGTACAATACAAAAACTGTGTTACTCGATCGAGCTCTCTTTCTCAAATTGTTATACCTTTCGTACATGCTAGCTAAGCTTGCTTTGATAAAGAGAGAAACTCAATTACTACATTCGTCCTAGGAGTTGCAAGGAAAGGTGATGCTCCATGGAGACGAAGGTGAGAAATTCACCTTTGCGGAGCTCGTGGCGGCGACCAACAACATTGCAGCTGACAGAGAGATCGGTAAAGGCGGCTTCGGCACGGTGTACATTGGATATCTTCTTCGGGACGGGCGAGAGGTGGCCATCAAGCGCATGCACAAGGACGAGAGGTACGGGACAATGGCTAAGGAATTCATGGCAGAGGTGACCAAGAACGAGTACACCAAGAACGGCTCGGTTCACGACCACCTGCACGGTACGCCGCCACCGTCGCCGTCGTCCTCGTCGTCGCCGGTGAGGGCGTCATGGAAGATGCGCATCGAGACACTGCTGGGCGTGTTGCGGGCCATCGAATACCTGCAGTTCTACAACGAGCGGCCGGTGATCCACTGCGACATCAACTCGTCAAACATCCTATTCGACACCACTTGGGCGCCACGCTTGGCTGACTTCGGCGCGTCGGTCCGCTGCGATCCCTCGTCGAGAAGTGTTCGGCCTGATGCTATCTATGGCAAGTTCGGATACATCGACCTGGAGCACGACAGCGATCGCGAAGCCGACGATCGACGTGTACAGCTTCGGCGTCGTGATGCTGGAGCTGTTGACGGGGATGAGGGCACTCTTTTACAAAGAGGACGACGTGCACGAGGTGTTCGACTGTTGGGAGGAGGATCCGAACGCTATCCCCGCCGTCTTGGCTGAAGTCGCACCGCCGTTCATCGAGGTAGGGGAGGTGTGGAAGGTGTTGGACAGGCGGCCGACACCGGAGCCAACGGCGAGGCAGCTGGAGTCGGCGGATCAGCTGGTGGCGCAGACGGCAGCGCGCTGCGTGCGGCTGCGGGGGGAGGACCGGCCGGCCATTTCCGAAGTCGTGGCCAACCTTGAGGCAGCGGTTGAGCTCGCCCGGTGCGATGGGTAG
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| CDS seq | ATGTGGAGCGGGATGGGGCAGGCGGCGACGGTGGCGCAGCTGGTCGGCGCAGACGCGGCGTTGACGGCTCAGCGGAACAAGAAGGAGTGCGAGCAGCTCGCTCGCCGCGTGTTCATGATCGCCGAGCTGCTGCCGTACCTGCAGGACCCGGAGGTGATGCGGCGGCCGGAGGTCCGGCGGTCGCTGGCCGGGCTCGGCGACACACTCCGGGAGGCGCACGAGCTTGCGATGTCCTGTCAGGGCATGACCATGGTGTACCGGTTGGTGACAGCCGGGCGGCAAGCTGACAAGTTCAGAGCAGGATCGACTCATACCTCCTCGTCTTCCCCTTCGATCATCAGCCACATCTACATCACTCGTCGTCTCGATCGAATCTACAACATCCTTCTTCCGAACGACATGTCCACTATGCCGTCTCCATCTTCAGGCTCCCACTCTCATGAGGTGGAGTTGCAAGGAAAGGTGATGCTCCATGGAGACGAAGGTGAGAAATTCACCTTTGCGGAGCTCGTGGCGGCGACCAACAACATTGCAGCTGACAGAGAGATCGGTAAAGGCGGCTTCGGCACGGTGTACATTGGATATCTTCTTCGGGACGGGCGAGAGGTGGCCATCAAGCGCATGCACAAGGACGAGAGGTACGGGACAATGGCTAAGGAATTCATGGCAGAGGTGACCAAGAACGAGTACACCAAGAACGGCTCGGTTCACGACCACCTGCACGGTACGCCGCCACCGTCGCCGTCGTCCTCGTCGTCGCCGGTGAGGGCGTCATGGAAGATGCGCATCGAGACACTGCTGGGCGTGTTGCGGGCCATCGAATACCTGCAGTTCTACAACGAGCGGCCGGTGATCCACTGCGACATCAACTCGTCAAACATCCTATTCGACACCACTTGGGCGCCACGCTTGGCTGACTTCGGCGCGTCGGTCCGCTGCGATCCCTCTTCGGATACATCGACCTGGAGCACGACAGCGATCGCGAAGCCGACGATCGACGTGTACAGCTTCGGCGTCGTGATGCTGGAGCTGTTGACGGGGATGAGGGCACTCTTTTACAAAGAGGACGACGTGCACGAGGTGTTCGACTGTTGGGAGGAGGATCCGAACGCTATCCCCGCCGTCTTGGCTGAAGTCGCACCGCCGTTCATCGAGGTAGGGGAGGTGTGGAAGGTGTTGGACAGGCGGCCGACACCGGAGCCAACGGCGAGGCAGCTGGAGTCGGCGGATCAGCTGGTGGCGCAGACGGCAGCGCGCTGCGTGCGGCTGCGGGGGGAGGACCGGCCGGCCATTTCCGAAGTCGTGGCCAACCTTGAGGCAGCGGTTGAGCTCGCCCGGTGCGATGGGTAG
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| Protein seq | MWSGMGQAATVAQLVGADAALTAQRNKKECEQLARRVFMIAELLPYLQDPEVMRRPEVRRSLAGLGDTLREAHELAMSCQGMTMVYRLVTAGRQADKFRAGSTHTSSSSPSIISHIYITRRLDRIYNILLPNDMSTMPSPSSGSHSHEVELQGKVMLHGDEGEKFTFAELVAATNNIAADREIGKGGFGTVYIGYLLRDGREVAIKRMHKDERYGTMAKEFMAEVTKNEYTKNGSVHDHLHGTPPPSPSSSSSPVRASWKMRIETLLGVLRAIEYLQFYNERPVIHCDINSSNILFDTTWAPRLADFGASVRCDPSSDTSTWSTTAIAKPTIDVYSFGVVMLELLTGMRALFYKEDDVHEVFDCWEEDPNAIPAVLAEVAPPFIEVGEVWKVLDRRPTPEPTARQLESADQLVAQTAARCVRLRGEDRPAISEVVANLEAAVELARCDG |
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| Function | Putative serine/threonine-protein kinase-like protein CCR3 [UniProtKB/Swiss-Prot:Q9LY50] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0422900 | OsZS97_11T0422900.1 | Chr11 | 30013696 | 30015239 | + | makerRMon | ||
| CDS seq | ATGTGGAGCGGGATGGGGCAGGCGGCGACGGTGGCGCAGCTGGTCGGCGCAGACGCGGCGTTGACGGCTCAGCGGAACAAGAAGGAGTGCGAGCAGCTCGCTCGCCGCGTGTTCATGATCGCCGAGCTGCTGCCGTACCTGCAGGACCCGGAGGTGATGCGGCGGCCGGAGGTCCGGCGGTCGCTGGCCGGGCTCGGCGACACACTCCGGGAGGCGCACGAGCTTGCGATGTCCTGTCAGGGCATGACCATGGTGTACCGGTTGGTGACAGCCGGGCGGCAAGCTGACAAGTTCAGAGCAGGATCGACTCATACCTCCTCGTCTTCCCCTTCGATCATCAGCCACATCTACATCACTCGTCGTCTCGATCGAATCTACAACATCCTTCTTCCGAACGACATGTCCACTATGCCGTCTCCATCTTCAGGCTCCCACTCTCATGAGGTGGAGTTGCAAGGAAAGGTGATGCTCCATGGAGACGAAGGTGAGAAATTCACCTTTGCGGAGCTCGTGGCGGCGACCAACAACATTGCAGCTGACAGAGAGATCGGTAAAGGCGGCTTCGGCACGGTGTACATTGGATATCTTCTTCGGGACGGGCGAGAGGTGGCCATCAAGCGCATGCACAAGGACGAGAGGTACGGGACAATGGCTAAGGAATTCATGGCAGAGGTGACCAAGAACGAGTACACCAAGAACGGCTCGGTTCACGACCACCTGCACGGTACGCCGCCACCGTCGCCGTCGTCCTCGTCGTCGCCGGTGAGGGCGTCATGGAAGATGCGCATCGAGACACTGCTGGGCGTGTTGCGGGCCATCGAATACCTGCAGTTCTACAACGAGCGGCCGGTGATCCACTGCGACATCAACTCGTCAAACATCCTATTCGACACCACTTGGGCGCCACGCTTGGCTGACTTCGGCGCGTCGGTCCGCTGCGATCCCTCTTCGGATACATCGACCTGGAGCACGACAGCGATCGCGAAGCCGACGATCGACGTGTACAGCTTCGGCGTCGTGATGCTGGAGCTGTTGACGGGGATGAGGGCACTCTTTTACAAAGAGGACGACGTGCACGAGGTGTTCGACTGTTGGGAGGAGGATCCGAACGCTATCCCCGCCGTCTTGGCTGAAGTCGCACCGCCGTTCATCGAGGTAGGGGAGGTGTGGAAGGTGTTGGACAGGCGGCCGACACCGGAGCCAACGGCGAGGCAGCTGGAGTCGGCGGATCAGCTGGTGGCGCAGACGGCAGCGCGCTGCGTGCGGCTGCGGGGGGAGGACCGGCCGGCCATTTCCGAAGTCGTGGCCAACCTTGAGGCAGCGGTTGAGCTCGCCCGGTGCGATGGGTAG
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| Protein seq | MWSGMGQAATVAQLVGADAALTAQRNKKECEQLARRVFMIAELLPYLQDPEVMRRPEVRRSLAGLGDTLREAHELAMSCQGMTMVYRLVTAGRQADKFRAGSTHTSSSSPSIISHIYITRRLDRIYNILLPNDMSTMPSPSSGSHSHEVELQGKVMLHGDEGEKFTFAELVAATNNIAADREIGKGGFGTVYIGYLLRDGREVAIKRMHKDERYGTMAKEFMAEVTKNEYTKNGSVHDHLHGTPPPSPSSSSSPVRASWKMRIETLLGVLRAIEYLQFYNERPVIHCDINSSNILFDTTWAPRLADFGASVRCDPSSDTSTWSTTAIAKPTIDVYSFGVVMLELLTGMRALFYKEDDVHEVFDCWEEDPNAIPAVLAEVAPPFIEVGEVWKVLDRRPTPEPTARQLESADQLVAQTAARCVRLRGEDRPAISEVVANLEAAVELARCDG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.014915 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0667700 | SBH | 0.670455 | 0.756338 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44460 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0667700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0022990 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023020 | SBH | 0.028885 | 0.0 | 0.072533 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0022750 | SBH | 0.0 | 0.0 | 0.340761 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022300 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022670 | SBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0401400 | SBH | 0.07676 | 14.955124 | 0.1836165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023590 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023110 | SBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023320 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0022930 | SBH | 4.118145 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022650 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0022540 | SBH | 0.0 | 1.027365 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G022880 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023310 | SBH | 0.0 | 0.0 | 0.0 |
