Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_11G0320700 OGI:11058510 | 16/16 Zhenshan 97 | ZS97RS3 | HZAU Chr11:23025131-23025775
Gene Symbol -
DNA seq

ATGGAGAGTTCAGCCGTCATCAGTGCCGAGGAGATGGCTAGCTGTAGCTGGGTGGTAGAGATCGAGAGGTCCATCAGTGGCGACGCCGGCGGCGGAACGCCTGGAGCGATGGCGCGAGGATCGAAGCCGAGGCATTCCATCTACCGAGTGCCGGAGTACATCAAGAACATGACGAACCCCAATGCCTACCGGCCTCAGGTGGTGTCGCTGGGGCCTTTCCATCACGGTGATTCTGCGCTCAAGCCGATGGAGAAGCACAAGTGCCGTGCGGTGGTGAACTTGGTCAAGCGGAGTGGGAAGCCTCTGCTGAAGTTCATCACTGCCGTCGAGGAGATAAAGGTGCAGCTTCAGGATGCGTATGAAAATCTAGAAGACATATGGTATCAAGGTACACGCTTCGTGGAGATGATGCTCAAGGACGGCTGCTTCTTGCTAGAGATGGCAATGCTTGAGCTACATGGGAGAGTCAAAGACTATGAACCCGATGACTCTGTCTTTAGCAAGCACGGCCGCTTATACTTGTTGTCCGGTATCCAATCCGACGTGGTGTTGATGGAGAACCAACTACTTCTTCTCCTTCTCCATAAACTTACAAATGTTGCATATGGCCACGATTTTCTGGTACGTATTCATGAGCTTGAGTAA

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CDS seq

ATGGAGAGTTCAGCCGTCATCAGTGCCGAGGAGATGGCTAGCTGTAGCTGGGTGGTAGAGATCGAGAGGTCCATCAGTGGCGACGCCGGCGGCGGAACGCCTGGAGCGATGGCGCGAGGATCGAAGCCGAGGCATTCCATCTACCGAGTGCCGGAGTACATCAAGAACATGACGAACCCCAATGCCTACCGGCCTCAGGTGGTGTCGCTGGGGCCTTTCCATCACGGTGATTCTGCGCTCAAGCCGATGGAGAAGCACAAGTGCCGTGCGGTGGTGAACTTGGTCAAGCGGAGTGGGAAGCCTCTGCTGAAGTTCATCACTGCCGTCGAGGAGATAAAGGTGCAGCTTCAGGATGCGTATGAAAATCTAGAAGACATATGGTATCAAGGTACACGCTTCGTGGAGATGATGCTCAAGGACGGCTGCTTCTTGCTAGAGATGGCAATGCTTGAGCTACATGGGAGAGTCAAAGACTATGAACCCGATGACTCTGTCTTTAGCAAGCACGGCCGCTTATACTTGTTGTCCGGTATCCAATCCGACGTGGTGTTGATGGAGAACCAACTACTTCTTCTCCTTCTCCATAAACTTACAAATGTTGCATATGGCCACGATTTTCTGGTACGTATTCATGAGCTTGAGTAA

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Protein seq

MESSAVISAEEMASCSWVVEIERSISGDAGGGTPGAMARGSKPRHSIYRVPEYIKNMTNPNAYRPQVVSLGPFHHGDSALKPMEKHKCRAVVNLVKRSGKPLLKFITAVEEIKVQLQDAYENLEDIWYQGTRFVEMMLKDGCFLLEMAMLELHGRVKDYEPDDSVFSKHGRLYLLSGIQSDVVLMENQLLLLLLHKLTNVAYGHDFLVRIHELE

Function UPF0481 protein At3g47200 [UniProtKB/Swiss-Prot:Q9SD53]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_11G0320700 OsZS97_11T0320700.1 Chr11 23025131 23025775 + makerRMon
CDS seq

ATGGAGAGTTCAGCCGTCATCAGTGCCGAGGAGATGGCTAGCTGTAGCTGGGTGGTAGAGATCGAGAGGTCCATCAGTGGCGACGCCGGCGGCGGAACGCCTGGAGCGATGGCGCGAGGATCGAAGCCGAGGCATTCCATCTACCGAGTGCCGGAGTACATCAAGAACATGACGAACCCCAATGCCTACCGGCCTCAGGTGGTGTCGCTGGGGCCTTTCCATCACGGTGATTCTGCGCTCAAGCCGATGGAGAAGCACAAGTGCCGTGCGGTGGTGAACTTGGTCAAGCGGAGTGGGAAGCCTCTGCTGAAGTTCATCACTGCCGTCGAGGAGATAAAGGTGCAGCTTCAGGATGCGTATGAAAATCTAGAAGACATATGGTATCAAGGTACACGCTTCGTGGAGATGATGCTCAAGGACGGCTGCTTCTTGCTAGAGATGGCAATGCTTGAGCTACATGGGAGAGTCAAAGACTATGAACCCGATGACTCTGTCTTTAGCAAGCACGGCCGCTTATACTTGTTGTCCGGTATCCAATCCGACGTGGTGTTGATGGAGAACCAACTACTTCTTCTCCTTCTCCATAAACTTACAAATGTTGCATATGGCCACGATTTTCTGGTACGTATTCATGAGCTTGAGTAA

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Protein seq

MESSAVISAEEMASCSWVVEIERSISGDAGGGTPGAMARGSKPRHSIYRVPEYIKNMTNPNAYRPQVVSLGPFHHGDSALKPMEKHKCRAVVNLVKRSGKPLLKFITAVEEIKVQLQDAYENLEDIWYQGTRFVEMMLKDGCFLLEMAMLELHGRVKDYEPDDSVFSKHGRLYLLSGIQSDVVLMENQLLLLLLHKLTNVAYGHDFLVRIHELE

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0541200 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g33942 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os11g0541200 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0016440 RBH 1.924836 0.0 4.441315
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0016480 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0016360 RBH 1.705922 0.0 7.307921
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0015990 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0016430 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0311400 SBH 0 0.010016 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0016740 RBH 0.0 0.452619 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0321300 SBH 0.393025 0.03178 0.20627
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0016710 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0016610 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0016270 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0016050 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G016170 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0016500 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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