Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_10G0371300 | OGI:10064050 | 8/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr10:23573677-23574903 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGGAAGGCTAGTGGCAACACTAGTGCTCGTGATGTGCTCGGCGGCGTGTTCGCTCGCGCGCGCGCACGGCGGCGGCCTCCGGCGAGGTGTAGAGCGTGCCAACATGCGCGGCCGCCTCCTCGCCGACGCGGCGGTGGCAGGAGGCGGCGGCGGCGTCGTGCCGATCTACTGGTCCCAGCCGCTCTACATGGCGAACCTCACCATCGGCACGCCGCCGCAGCCGGCGTCGGCGATCATCCACCTCGCCGGGGAGTTCGTCTGGACGCAGTGCTCGCCGTGCCGCCGCTGCTTCAAGCAGGATCTTCCCCTGTTCAACCGGTCCGCGTCGTCCACCTACCGGCCGGAGCCGTGCGGCACGGCCCTGTGCGAGTCCGTCCCGGCGAGCACCTGCTCCGGCGACGGCGTGTGCAGCTACGAGGTGGAAACCATGTTCGGGGACACGTCCGGGATCGGCGGCACCGACACCTTCGCCATCGGGACGGCCACGGCGAGCCTCGCCTTCGGGTGCGCCATGGACAGCAACATCAAGCAACTGCTGGGAGCTTCCGGGGTCGTCGGGCTAGGGAGGACGCCGTGGTCGCTCGTCGGGCAGATGAACGCCACGGCGTTTTCCTACTGCCTCGCGCCGCACGGCGCGGCCGGGAAGAAGAGCGCGCTGCTCCTCGGCGCCTCCGCGAAGCTCGCCGGCGGCAAGAGCGCCGCCACGACGCCGCTCGTCAACACCTCCGACGACTCCTCCGATTACATGATCCATCTGGAAGGGATCAAATTCGGCGACGTGATAATCGAGCCGCCTCCGAACGGCAGCGTCGTCCTGGTCGACACCATCTTTGGGGTGAGCTTCCTGGTCGACGCCGCGTTCCACGCCATCAAGAAGGCGGTGACGGTCGCCGTCGGCGCGGCGCCGATGGCGACGCCGACGAAACCGTTCGATCTCTGCTTCCCGAAAGCAGCTGCGGCGGCGGGGGCCAACAGCAGCTTGCCGTTGCCGGACGTCGTGCTCACGTTCCAGGGCGCCGCCGCGTTGACGGTGCCGCCGTCGAAGTACATGTACGACGCCGGGAACGGCACGGTGTGCCTCGCCATGATGAGCTCGGCGATGCTGAACCTGACGACGGAGCTGAGCATCCTGGGAAGATTGCATCAGGAGAACATCCACTTCCTCTTCGACCTCGACAAGGAGACGCTCTCCTTCGAACCAGCGGATTGCAGCTCACTCTCCTAA
More
|
||||||||||
| CDS seq | ATGGGAAGGCTAGTGGCAACACTAGTGCTCGTGATGTGCTCGGCGGCGTGTTCGCTCGCGCGCGCGCACGGCGGCGGCCTCCGGCGAGGTGTAGAGCGTGCCAACATGCGCGGCCGCCTCCTCGCCGACGCGGCGGTGGCAGGAGGCGGCGGCGGCGTCGTGCCGATCTACTGGTCCCAGCCGCTCTACATGGCGAACCTCACCATCGGCACGCCGCCGCAGCCGGCGTCGGCGATCATCCACCTCGCCGGGGAGTTCGTCTGGACGCAGTGCTCGCCGTGCCGCCGCTGCTTCAAGCAGGATCTTCCCCTGTTCAACCGGTCCGCGTCGTCCACCTACCGGCCGGAGCCGTGCGGCACGGCCCTGTGCGAGTCCGTCCCGGCGAGCACCTGCTCCGGCGACGGCGTGTGCAGCTACGAGGTGGAAACCATGTTCGGGGACACGTCCGGGATCGGCGGCACCGACACCTTCGCCATCGGGACGGCCACGGCGAGCCTCGCCTTCGGGTGCGCCATGGACAGCAACATCAAGCAACTGCTGGGAGCTTCCGGGGTCGTCGGGCTAGGGAGGACGCCGTGGTCGCTCGTCGGGCAGATGAACGCCACGGCGTTTTCCTACTGCCTCGCGCCGCACGGCGCGGCCGGGAAGAAGAGCGCGCTGCTCCTCGGCGCCTCCGCGAAGCTCGCCGGCGGCAAGAGCGCCGCCACGACGCCGCTCGTCAACACCTCCGACGACTCCTCCGATTACATGATCCATCTGGAAGGGATCAAATTCGGCGACGTGATAATCGAGCCGCCTCCGAACGGCAGCGTCGTCCTGGTCGACACCATCTTTGGGGTGAGCTTCCTGGTCGACGCCGCGTTCCACGCCATCAAGAAGGCGGTGACGGTCGCCGTCGGCGCGGCGCCGATGGCGACGCCGACGAAACCGTTCGATCTCTGCTTCCCGAAAGCAGCTGCGGCGGCGGGGGCCAACAGCAGCTTGCCGTTGCCGGACGTCGTGCTCACGTTCCAGGGCGCCGCCGCGTTGACGGTGCCGCCGTCGAAGTACATGTACGACGCCGGGAACGGCACGGTGTGCCTCGCCATGATGAGCTCGGCGATGCTGAACCTGACGACGGAGCTGAGCATCCTGGGAAGATTGCATCAGGAGAACATCCACTTCCTCTTCGACCTCGACAAGGAGACGCTCTCCTTCGAACCAGCGGATTGCAGCTCACTCTCCTAA
More
|
||||||||||
| Protein seq | MGRLVATLVLVMCSAACSLARAHGGGLRRGVERANMRGRLLADAAVAGGGGGVVPIYWSQPLYMANLTIGTPPQPASAIIHLAGEFVWTQCSPCRRCFKQDLPLFNRSASSTYRPEPCGTALCESVPASTCSGDGVCSYEVETMFGDTSGIGGTDTFAIGTATASLAFGCAMDSNIKQLLGASGVVGLGRTPWSLVGQMNATAFSYCLAPHGAAGKKSALLLGASAKLAGGKSAATTPLVNTSDDSSDYMIHLEGIKFGDVIIEPPPNGSVVLVDTIFGVSFLVDAAFHAIKKAVTVAVGAAPMATPTKPFDLCFPKAAAAAGANSSLPLPDVVLTFQGAAALTVPPSKYMYDAGNGTVCLAMMSSAMLNLTTELSILGRLHQENIHFLFDLDKETLSFEPADCSSLS |
||||||||||
| Function | Aspartic proteinase nepenthesin-1 [UniProtKB/Swiss-Prot:Q766C3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_10G0371300 | OsZS97_10T0371300.1 | Chr10 | 23573677 | 23574903 | + | makerRMon | ||
| CDS seq | ATGGGAAGGCTAGTGGCAACACTAGTGCTCGTGATGTGCTCGGCGGCGTGTTCGCTCGCGCGCGCGCACGGCGGCGGCCTCCGGCGAGGTGTAGAGCGTGCCAACATGCGCGGCCGCCTCCTCGCCGACGCGGCGGTGGCAGGAGGCGGCGGCGGCGTCGTGCCGATCTACTGGTCCCAGCCGCTCTACATGGCGAACCTCACCATCGGCACGCCGCCGCAGCCGGCGTCGGCGATCATCCACCTCGCCGGGGAGTTCGTCTGGACGCAGTGCTCGCCGTGCCGCCGCTGCTTCAAGCAGGATCTTCCCCTGTTCAACCGGTCCGCGTCGTCCACCTACCGGCCGGAGCCGTGCGGCACGGCCCTGTGCGAGTCCGTCCCGGCGAGCACCTGCTCCGGCGACGGCGTGTGCAGCTACGAGGTGGAAACCATGTTCGGGGACACGTCCGGGATCGGCGGCACCGACACCTTCGCCATCGGGACGGCCACGGCGAGCCTCGCCTTCGGGTGCGCCATGGACAGCAACATCAAGCAACTGCTGGGAGCTTCCGGGGTCGTCGGGCTAGGGAGGACGCCGTGGTCGCTCGTCGGGCAGATGAACGCCACGGCGTTTTCCTACTGCCTCGCGCCGCACGGCGCGGCCGGGAAGAAGAGCGCGCTGCTCCTCGGCGCCTCCGCGAAGCTCGCCGGCGGCAAGAGCGCCGCCACGACGCCGCTCGTCAACACCTCCGACGACTCCTCCGATTACATGATCCATCTGGAAGGGATCAAATTCGGCGACGTGATAATCGAGCCGCCTCCGAACGGCAGCGTCGTCCTGGTCGACACCATCTTTGGGGTGAGCTTCCTGGTCGACGCCGCGTTCCACGCCATCAAGAAGGCGGTGACGGTCGCCGTCGGCGCGGCGCCGATGGCGACGCCGACGAAACCGTTCGATCTCTGCTTCCCGAAAGCAGCTGCGGCGGCGGGGGCCAACAGCAGCTTGCCGTTGCCGGACGTCGTGCTCACGTTCCAGGGCGCCGCCGCGTTGACGGTGCCGCCGTCGAAGTACATGTACGACGCCGGGAACGGCACGGTGTGCCTCGCCATGATGAGCTCGGCGATGCTGAACCTGACGACGGAGCTGAGCATCCTGGGAAGATTGCATCAGGAGAACATCCACTTCCTCTTCGACCTCGACAAGGAGACGCTCTCCTTCGAACCAGCGGATTGCAGCTCACTCTCCTAA
More
|
|||||||
| Protein seq | MGRLVATLVLVMCSAACSLARAHGGGLRRGVERANMRGRLLADAAVAGGGGGVVPIYWSQPLYMANLTIGTPPQPASAIIHLAGEFVWTQCSPCRRCFKQDLPLFNRSASSTYRPEPCGTALCESVPASTCSGDGVCSYEVETMFGDTSGIGGTDTFAIGTATASLAFGCAMDSNIKQLLGASGVVGLGRTPWSLVGQMNATAFSYCLAPHGAAGKKSALLLGASAKLAGGKSAATTPLVNTSDDSSDYMIHLEGIKFGDVIIEPPPNGSVVLVDTIFGVSFLVDAAFHAIKKAVTVAVGAAPMATPTKPFDLCFPKAAAAAGANSSLPLPDVVLTFQGAAALTVPPSKYMYDAGNGTVCLAMMSSAMLNLTTELSILGRLHQENIHFLFDLDKETLSFEPADCSSLS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.1504775 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0539200 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g39380 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0539200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0018480 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018870 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0018260 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018810 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0018540 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0346300 | RBH | 0 | 0.1752735 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0018420 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0018180 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0018120 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018650 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0018220 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018730 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G018480 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0018560 | SBH | 0.0 | 0.0 | 0.0 |
