Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_10G0327600 OGI:10053590 | 2/16 Zhenshan 97 | ZS97RS3 | HZAU Chr10:20961395-20963637
Gene Symbol -
DNA seq

ATGTGTGTCGACTTCACTGACCTCAACAAGGCGTGCCCCAAGGATCACTTTCCACTCCCTCGAATAGACCAACTGGTGGATTCAACAGCCGGTTGCTTGCTATTGAGCTTCCTCGACACTTACTCTGGCTACCACCAAATCAGCATGGCAAAAGAGGACGAAGAGAAGACAGTATTCATCACGCCGTTCGGGGTATTTTGCTATGTTAAGATGCCGTTCGGACTGATAACAGCTGTGAATACTTTCTAGCGCACGGTCTAGGGCGCACTTAGCAACCAGCTTGGCAACAATGTCGAGGCTTACGTCGACGACATCGTTGTCAAAACCAAGACATGCGACTCATTGATTGACGATCTGCGGGAAACGTTCGACAACCTCCGACGATATCGCCTCATGCTCAATCCTGAGAAGTGCACGTTCGGAGTACCGTCGGGCAAGCTGCTCGGATTCCTTGTCTCTGGCAGAGGAATAGAAGCAAACCCCGAGAAGATCAAGGCAATCGAGAACATGAAGTCGCCTACAAGACTCAAGGAGGTACAAAAGCTAACTAGATGCATGACAGCACTAAGCAGATTCGTCGCTAGGATGGGAGAACGAGGACAACCTTTCTTCGCTCTGTTGAAGAAACAAGACAAATTTGTATGGACACAGGAAGCCGAAGAGGCATTCATTGCACTCAAGCGCTACTTATCAAACCCTCCTGTACTTGTTGCTCCCCAACCTAATGAAGAATTATTCCTCTATATTGCCACCACACCATATTCCGTTAGCACTGTCATTGTTGTCGAGAGAGAGAAAGTACAGCGACCAGTTTATTACGTCAGCGAAGCTCTCCACGACACAAAGACAAGATACCCACAGATCCAAAAGCTGCTTTACGCAGTCATCATGACATCAAGGAAGCTACGCCACTACTTTCAAGCCCACAGAGTCACAGTTGTCTCCTCTTTCCCTCTTGGTGAAGTTGTGAGAAACAAAGACGTTGTCGGCCGCATTGCGAAATGGGTAGTCGAGCTGAGCCAGTTTGATGTCCACTTTGTGCCACGAACAGCCATCAAGTCCCAGGTACTCGCCGACTTCGTTGCCGATTGGACTATGCCAGATAACAAATCAGACAACCAAGGCGACAATGAAACATGGACAATGGCGTTCGATGGCGCACTCAACAGCCAAGGAGCAGGGGCAGGATTTATCTTGACGTCTCCCTCCGGAGATCAATTCAAGCATGCAATCCACCTCAACTTCAGGGCGACCAATAACACTGCAGAATACGAAGGACTACTTGCCGGGATACAAGCTGCAGCTACACTTGGGGCCAAGCGACTAATCGTCAAAGGGGACTCCGAGCTAGTCGCGAACCAAGTACACAAAGATTATAAATGCTCTAACTCCGAGTTATCCAAGTATCTCGCAGATGTCAGGAAGCTAGAGAAAAGGTTCGATGGGATCGAGGTCCGACACGTCTACCGCAAGGACAACGTCGAGCCAGACGACCTAGCACGACGTGCGTCCAGACGAGAATCGCTCGAGCCCGGCACTTTCCTCGACATCCTGACGAAGCCATCGGTGAAGTCAGCCCGAACACCCCCGACATTAGCTCGGAGGTCACCGAGGCAGAACGCGTCGTTGCCGACATTGAAACCACAGACGACTGGCGCATCCCACTAATCAAATTCATCAGCAGTGAGGAGTTGCCCAAGGACGATACAGAGGCCGAGAAAATAACCCGTAAAGCAAAGATCTACTGTATGGTCGGCAACGATCTATACAAGAAAGCGCCAAACGGGGTACTTCTCAAATGCGTCTCGACCGACGACGGCAGACACCTCCTCCTTGACATACATGAAGGCATATGTGGGTCACATGCCGCCAGTCGGACATTGGTCGGCAAATCTTTTCGACAAGGCTTTTTCTGGCCAACCGCCCTTAAAGATGCATGCGACATGGTCCAGCGATGTGAAGCCTGTCAATTCCACAGTGAACATACAAAGCTACCCGCGCAAGCGCTCCAGACTATCCCTCTGACTTGGCCATTCTCGTGCTGGGGGCTAGATATACTTGGGCCATTCCCACGAGGACAGGGCGGCTACAGATTCCTATTCGTGGCGATCGACAAATTCACCAAATGGATCGAAGCAGTACCCACGAGGGAAATCAAGGCCGACAACGCCATCAATTTCATCAAAGGGATATTTTGCAGATACAGACTACCACACCGCATCATAACTGATAACGGCTCCTAG

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CDS seq

ATGTGTGTCGACTTCACTGACCTCAACAAGGCGTGCCCCAAGGATCACTTTCCACTCCCTCGAATAGACCAACTGGTGGATTCAACAGCCGGTTGCTTGCTATTGAGCTTCCTCGACACTTACTCTGGCTACCACCAAATCAGCATGGCAAAAGAGGACGAAGAGAAGACAGTATTCATCACGCCGTTCGGGGGCGCACTTAGCAACCAGCTTGGCAACAATGTCGAGGCTTACGTCGACGACATCGTTGTCAAAACCAAGACATGCGACTCATTGATTGACGATCTGCGGGAAACGTTCGACAACCTCCGACGATATCGCCTCATGCTCAATCCTGAGAAGTGCACGTTCGGAGTACCGTCGGGCAAGCTGCTCGGATTCCTTGTCTCTGGCAGAGGAATAGAAGCAAACCCCGAGAAGATCAAGGCAATCGAGAACATGAAGTCGCCTACAAGACTCAAGGAGGAAGCCGAAGAGGCATTCATTGCACTCAAGCGCTACTTATCAAACCCTCCTGTACTTGTTGCTCCCCAACCTAATGAAGAATTATTCCTCTATATTGCCACCACACCATATTCCGTTAGCACTGTCATTGTTGTCGAGAGAGAGAAAGTACAGCGACCAGTTTATTACGTCAGCGAAGCTCTCCACGACACAAAGACAAGATACCCACAGATCCAAAAGCTGCTTTACGCAGTCATCATGACATCAAGGAAGCTACGCCACTACTTTCAAGCCCACAGAGTCACAGTTGTCTCCTCTTTCCCTCTTGGTGAAGTTGTGAGAAACAAAGACGTTGTCGGCCGCATTGCGAAATGGGTAGTCGAGCTGAGCCAGTTTGATGTCCACTTTGTGCCACGAACAGCCATCAAGTCCCAGGTACTCGCCGACTTCGTTGCCGATTGGACTATGCCAGATAACAAATCAGACAACCAAGGCGACAATGAAACATGGACAATGGCGTTCGATGGCGCACTCAACAGCCAAGGAGCAGGGGCAGGATTTATCTTGACGTCTCCCTCCGGAGATCAATTCAAGCATGCAATCCACCTCAACTTCAGGGCGACCAATAACACTGCAGAATACGAAGGACTACTTGCCGGGATACAAGCTGCAGCTACACTTGGGGCCAAGCGACTAATCGTCAAAGGGGACTCCGAGCTAGTCGCGAACCAAGTACACAAAGATTATAAATGCTCTAACTCCGAGTTATCCAAGTATCTCGCAGATGTCAGGAAGCTAGAGAAAAGGTTCGATGGGATCGAGGTCCGACACGTCTACCGCAAGGACAACGTCGAGCCAGACGACCTAGCACGACGTGCGTCCAGACGAGAATCGCTCGAGCCCGGCACTTTCCTCGACATCCTGACGAAGCCATCGGTGAACTCGGAGGTCACCGAGGCAGAACGCGTCGTTGCCGACATTGAAACCACAGACGACTGGCGCATCCCACTAATCAAATTCATCAGCAGTGAGGAGTTGCCCAAGGACGATACAGAGGCCGAGAAAATAACCCGTAAAGCAAAGATCTACTGTATGGTCGGCAACGATCTATACAAGAAAGCGCCAAACGGGGTACTTCTCAAATGCGTCTCGACCGACGACGGCAGACACCTCCTCCTTGACATACATGAAGGCATATGTGGGTCACATGCCGCCAGTCGGACATTGGTCGGCAAATCTTTTCGACAAGGCTTTTTCTGGCCAACCGCCCTTAAAGATGCATGCGACATGGTCCAGCGATGTGAAGCCTGTCAATTCCACAGTGAACATACAAAGCTACCCGCGCAAGCGCTCCAGACTATCCCTCTGACTTGGCCATTCTCGTGCTGGGGGCTAGATATACTTGGGCCATTCCCACGAGGACAGGGCGGCTACAGATTCCTATTCGTGGCGATCGACAAATTCACCAAATGGATCGAAGCAGTACCCACGAGGGAAATCAAGGCCGACAACGCCATCAATTTCATCAAAGGGATATTTTGCAGATACAGACTACCACACCGCATCATAACTGATAACGGCTCCTAG

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Protein seq

MCVDFTDLNKACPKDHFPLPRIDQLVDSTAGCLLLSFLDTYSGYHQISMAKEDEEKTVFITPFGGALSNQLGNNVEAYVDDIVVKTKTCDSLIDDLRETFDNLRRYRLMLNPEKCTFGVPSGKLLGFLVSGRGIEANPEKIKAIENMKSPTRLKEEAEEAFIALKRYLSNPPVLVAPQPNEELFLYIATTPYSVSTVIVVEREKVQRPVYYVSEALHDTKTRYPQIQKLLYAVIMTSRKLRHYFQAHRVTVVSSFPLGEVVRNKDVVGRIAKWVVELSQFDVHFVPRTAIKSQVLADFVADWTMPDNKSDNQGDNETWTMAFDGALNSQGAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIQAAATLGAKRLIVKGDSELVANQVHKDYKCSNSELSKYLADVRKLEKRFDGIEVRHVYRKDNVEPDDLARRASRRESLEPGTFLDILTKPSVNSEVTEAERVVADIETTDDWRIPLIKFISSEELPKDDTEAEKITRKAKIYCMVGNDLYKKAPNGVLLKCVSTDDGRHLLLDIHEGICGSHAASRTLVGKSFRQGFFWPTALKDACDMVQRCEACQFHSEHTKLPAQALQTIPLTWPFSCWGLDILGPFPRGQGGYRFLFVAIDKFTKWIEAVPTREIKADNAINFIKGIFCRYRLPHRIITDNGS

Function Retrovirus-related Pol polyprotein from transposon 17.6 [UniProtKB/Swiss-Prot:P04323]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_10G0327600 OsZS97_10T0327600.1 Chr10 20961395 20963637 + makerRMon
CDS seq

ATGTGTGTCGACTTCACTGACCTCAACAAGGCGTGCCCCAAGGATCACTTTCCACTCCCTCGAATAGACCAACTGGTGGATTCAACAGCCGGTTGCTTGCTATTGAGCTTCCTCGACACTTACTCTGGCTACCACCAAATCAGCATGGCAAAAGAGGACGAAGAGAAGACAGTATTCATCACGCCGTTCGGGGGCGCACTTAGCAACCAGCTTGGCAACAATGTCGAGGCTTACGTCGACGACATCGTTGTCAAAACCAAGACATGCGACTCATTGATTGACGATCTGCGGGAAACGTTCGACAACCTCCGACGATATCGCCTCATGCTCAATCCTGAGAAGTGCACGTTCGGAGTACCGTCGGGCAAGCTGCTCGGATTCCTTGTCTCTGGCAGAGGAATAGAAGCAAACCCCGAGAAGATCAAGGCAATCGAGAACATGAAGTCGCCTACAAGACTCAAGGAGGAAGCCGAAGAGGCATTCATTGCACTCAAGCGCTACTTATCAAACCCTCCTGTACTTGTTGCTCCCCAACCTAATGAAGAATTATTCCTCTATATTGCCACCACACCATATTCCGTTAGCACTGTCATTGTTGTCGAGAGAGAGAAAGTACAGCGACCAGTTTATTACGTCAGCGAAGCTCTCCACGACACAAAGACAAGATACCCACAGATCCAAAAGCTGCTTTACGCAGTCATCATGACATCAAGGAAGCTACGCCACTACTTTCAAGCCCACAGAGTCACAGTTGTCTCCTCTTTCCCTCTTGGTGAAGTTGTGAGAAACAAAGACGTTGTCGGCCGCATTGCGAAATGGGTAGTCGAGCTGAGCCAGTTTGATGTCCACTTTGTGCCACGAACAGCCATCAAGTCCCAGGTACTCGCCGACTTCGTTGCCGATTGGACTATGCCAGATAACAAATCAGACAACCAAGGCGACAATGAAACATGGACAATGGCGTTCGATGGCGCACTCAACAGCCAAGGAGCAGGGGCAGGATTTATCTTGACGTCTCCCTCCGGAGATCAATTCAAGCATGCAATCCACCTCAACTTCAGGGCGACCAATAACACTGCAGAATACGAAGGACTACTTGCCGGGATACAAGCTGCAGCTACACTTGGGGCCAAGCGACTAATCGTCAAAGGGGACTCCGAGCTAGTCGCGAACCAAGTACACAAAGATTATAAATGCTCTAACTCCGAGTTATCCAAGTATCTCGCAGATGTCAGGAAGCTAGAGAAAAGGTTCGATGGGATCGAGGTCCGACACGTCTACCGCAAGGACAACGTCGAGCCAGACGACCTAGCACGACGTGCGTCCAGACGAGAATCGCTCGAGCCCGGCACTTTCCTCGACATCCTGACGAAGCCATCGGTGAACTCGGAGGTCACCGAGGCAGAACGCGTCGTTGCCGACATTGAAACCACAGACGACTGGCGCATCCCACTAATCAAATTCATCAGCAGTGAGGAGTTGCCCAAGGACGATACAGAGGCCGAGAAAATAACCCGTAAAGCAAAGATCTACTGTATGGTCGGCAACGATCTATACAAGAAAGCGCCAAACGGGGTACTTCTCAAATGCGTCTCGACCGACGACGGCAGACACCTCCTCCTTGACATACATGAAGGCATATGTGGGTCACATGCCGCCAGTCGGACATTGGTCGGCAAATCTTTTCGACAAGGCTTTTTCTGGCCAACCGCCCTTAAAGATGCATGCGACATGGTCCAGCGATGTGAAGCCTGTCAATTCCACAGTGAACATACAAAGCTACCCGCGCAAGCGCTCCAGACTATCCCTCTGACTTGGCCATTCTCGTGCTGGGGGCTAGATATACTTGGGCCATTCCCACGAGGACAGGGCGGCTACAGATTCCTATTCGTGGCGATCGACAAATTCACCAAATGGATCGAAGCAGTACCCACGAGGGAAATCAAGGCCGACAACGCCATCAATTTCATCAAAGGGATATTTTGCAGATACAGACTACCACACCGCATCATAACTGATAACGGCTCCTAG

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Protein seq

MCVDFTDLNKACPKDHFPLPRIDQLVDSTAGCLLLSFLDTYSGYHQISMAKEDEEKTVFITPFGGALSNQLGNNVEAYVDDIVVKTKTCDSLIDDLRETFDNLRRYRLMLNPEKCTFGVPSGKLLGFLVSGRGIEANPEKIKAIENMKSPTRLKEEAEEAFIALKRYLSNPPVLVAPQPNEELFLYIATTPYSVSTVIVVEREKVQRPVYYVSEALHDTKTRYPQIQKLLYAVIMTSRKLRHYFQAHRVTVVSSFPLGEVVRNKDVVGRIAKWVVELSQFDVHFVPRTAIKSQVLADFVADWTMPDNKSDNQGDNETWTMAFDGALNSQGAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIQAAATLGAKRLIVKGDSELVANQVHKDYKCSNSELSKYLADVRKLEKRFDGIEVRHVYRKDNVEPDDLARRASRRESLEPGTFLDILTKPSVNSEVTEAERVVADIETTDDWRIPLIKFISSEELPKDDTEAEKITRKAKIYCMVGNDLYKKAPNGVLLKCVSTDDGRHLLLDIHEGICGSHAASRTLVGKSFRQGFFWPTALKDACDMVQRCEACQFHSEHTKLPAQALQTIPLTWPFSCWGLDILGPFPRGQGGYRFLFVAIDKFTKWIEAVPTREIKADNAINFIKGIFCRYRLPHRIITDNGS

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0187425 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_10g0458700 SBH 1.999234 0.000000 3.969712
Nipponbare | IRGSP 1.0 | MSU LOC_Os10g40180 RBH 0.000000 0.000000 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os10g0458700 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_10g0013360 SBH 0.818101 10.163983 6.844480
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_10g0013580 SBH 0.143858 2.408525 2.659666
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_10g0013150 SBH 1.590287 3.720034 8.068151
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_10g0013430 SBH 0.069149 0.145698 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_10g0013350 SBH 4.466893 20.807396 21.681377
Minghui 63 | MH63RS3 | HZAU OsMH63_10G0305000 RBH 0.006504 0.0179535 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_10g0013370 SBH 0.269706 0.645614 1.376611
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_08G0159500 SBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_10g0013080 SBH 0.132705 0.067809 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_10g0012980 SBH 0.672302 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_10g0013360 SBH 4.616492 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_10g0013070 SBH 0.302272 0.0 1.758294
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_10g0013610 SBH 0.367782 0.782545 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_10G013300 SBH 0.486661 0.992701 4.193668
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_10g0013250 SBH 0.000000 6.865494 6.266395
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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