Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_09G0045400 | OGI:09006770 | 4/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr09:2493639-2493918 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTATAGCCTGCCGTTGTCGGCCATCTGCTTGATGTTGGAGTCGAAGCGGTCGAGGTTGCGGAGCTGCGGCGGGAGCCACGACAGGCTGACCCGGCTTTGCGGCGAGCACGTCACCCCCTGCCACGACCCAAGAGCACGGCGTCGCGGCGGTGGGGTCCCACGACGGCAGCACTGGCGACGGCGCCGCCGCCGGCAGCAGCGGCAGCAATGCCTTCCCGTCCGCGGCCGGCCGCACCGCCACCCCGGCGACCTCCAAGAACCGGCCGCCCCGGTGCGCCAT |
||||||||||
| CDS seq | ATGGCGCACCGGGGCGGCCGGTTCTTGGAGGTCGCCGGGGTGGCGGTGCGGCCGGCCGCGGACGGGAAGGCATTGCTGCCGCTGCTGCCGGCGGCGGCGCCGTCGCCAGGGGTGACGTGCTCGCCGCAAAGCCGGGTCAGCCTGTCGTGGCTCCCGCCGCAGCTCCGCAACCTCGACCGCTTCGACTCCAACATCAAGCAGATGGCCGACAACGGCAGGCTATAG |
||||||||||
| Protein seq | MAHRGGRFLEVAGVAVRPAADGKALLPLLPAAAPSPGVTCSPQSRVSLSWLPPQLRNLDRFDSNIKQMADNGRL |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_09G0045400 | OsZS97_09T0045400.1 | Chr09 | 2493639 | 2493918 | - | makerRMon | ||
| CDS seq | ATGGCGCACCGGGGCGGCCGGTTCTTGGAGGTCGCCGGGGTGGCGGTGCGGCCGGCCGCGGACGGGAAGGCATTGCTGCCGCTGCTGCCGGCGGCGGCGCCGTCGCCAGGGGTGACGTGCTCGCCGCAAAGCCGGGTCAGCCTGTCGTGGCTCCCGCCGCAGCTCCGCAACCTCGACCGCTTCGACTCCAACATCAAGCAGATGGCCGACAACGGCAGGCTATAG
More
|
|||||||
| Protein seq | MAHRGGRFLEVAGVAVRPAADGKALLPLLPAAAPSPGVTCSPQSRVSLSWLPPQLRNLDRFDSNIKQMADNGRL |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 6.902276 | 35.6135635 | 21.848731 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0033700 | RBH | 4.520309 | 20.592641 | 22.944542 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0001510 | SBH | 1.278538 | 0.254889 | 1.946836 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0001480 | RBH | 0.369707 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0001570 | SBH | 34.441418 | 22.022106 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0001460 | SBH | 3.071156 | 0.0 | 3.177739 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0001490 | SBH | 1.530817 | 5.844650 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0001510 | RBH | 1.707155 | 0.000000 | 1.218785 |
