Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_09g0001480 | OGI:09006770 | 4/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr09:2619263-2620604 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCACTGATATTTTGTAAGCTTGATAGCCATGCTGGTGACTTGCAGAGTTGTGGTGAAGGCAAATGCTACGTTACCTTCAATCCATACATATACTAGCACTGGTGTTTACCACTTCCGTAGCTGTGCAGTCTCTCTGTGTTGTACACGTTTTCTCCAGCTACACCTTGCTCCATAGTCTCTGAAGCTCCTCACAGTTCAGTTCTAACCCACCAATTGCCATGCCCTTTTTGATTTTTCACTTATCCCCATTCATTCCATTCCAATGGAAACACCACCACCACATGTTAGCAGGCGACACACATCCTTTCTATATGTGTTGCGTTAAGAATCACATAAAATTCCAGGGTTAATTGGATCCATGCTACTGCAATTTTGCCAAATTAAAAAAATACCACTGCTATTCATCATATCGGCTACGTGCCACTGGAAATTTCTAAAATTGGAACCATGCTACTCCCGTCACTTTTTTCATCTCATCTCTCACGCCGTCTCCGTTCACATCCTTATCCCCCTCCTCTCCACGGCCACGGGCGGCTTCGGCAATCGTGGCCTTGTCGTCGTTCGCCAGCGCGAGCTCGCCGAGGTAGTCGGCCATGGCGACCTGCGTGGCTGCGTGTCCGGTTCGCCGTGGAGCAGCCTTGTGAGGAGCGGCTGCAGCCTATAGCCTGCCGTTGTCGGCCATCTGCTTGATGTTGGAGTCGAAGCGGTCGAGGTTGCGGAGCTGCGGCGGGAGCCACGACAGGCTGACCCGGCTTTGCGGCGAGCACGTCACCCCCTGCCACGACCCAAGAGCACGGCGTCGCGGCGGTGGGGTCCCACGACGGCAGCACTGGCGACGGCGCCGCCGCCGGCAGCAGCGGCAGCAATGCCTTCCCGTCCGCGGCCGGCCGCACCGCCACCCCGGCGACCTCCAAGAACCGGCCGCCCCGGTGCGCCATTACCCCCAACAATCAAGAAACCACAAAAAAACCAGACCAAAAAGAACAAATCTCCCCCTAATCTACAGCTCACGACATGAGAGAAGCTTGCTTGCTAGTGGAAGAGCATATACTAGTGCGTGAGGAAGCCGCAAGGAGAAACTTTGAGCTGGAGTTGCTTAAGCCGCACCCCAATCGCATATGGAGCTAGGCGAAGAGATCGATCGATTTGGTCTTATCTGCGTGTCTCGGGGTTGGAGGAGTATTTAATGGAGCCTATGAACCGGCGTGGCACCTCCCTCCTCGTCGCTGGCGCGGAGGCGTCCGCGCCTGCCGCTCTCCCACCTCGCTTCCGCGTGCGTGTCCGACGACTCCGCCACGAACCACGCCAGGCCCGGCCGCAACCGCTCCGGCCTGTACTCCGC
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| CDS seq | ATGGCGCACCGGGGCGGCCGGTTCTTGGAGGTCGCCGGGGTGGCGGTGCGGCCGGCCGCGGACGGGAAGGCATTGCTGCCGCTGCTGCCGGCGGCGGCGCCGTCGCCAGTGCTGCCGTCGTGGGACCCCACCGCCGCGACGCCGTGCTCTTGGGTCGTGGCAGGGGGTGACGTGCTCGCCGCAAAGCCGGGTAACGTAGCATTTGCCTTCACCACAACTCTGCAAGTCACCAGCATGGCTATCAAGCTTACAAAATATCAGTGA |
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| Protein seq | MAHRGGRFLEVAGVAVRPAADGKALLPLLPAAAPSPVLPSWDPTAATPCSWVVAGGDVLAAKPGNVAFAFTTTLQVTSMAIKLTKYQ |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_09g0001480 | OsKYG_09g0001480.01 | Chr09 | 2619263 | 2620604 | - | NAM | ||
| CDS seq | ATGGCGCACCGGGGCGGCCGGTTCTTGGAGGTCGCCGGGGTGGCGGTGCGGCCGGCCGCGGACGGGAAGGCATTGCTGCCGCTGCTGCCGGCGGCGGCGCCGTCGCCAGTGCTGCCGTCGTGGGACCCCACCGCCGCGACGCCGTGCTCTTGGGTCGTGGCAGGGGGTGACGTGCTCGCCGCAAAGCCGGGTAACGTAGCATTTGCCTTCACCACAACTCTGCAAGTCACCAGCATGGCTATCAAGCTTACAAAATATCAGTGA
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| Protein seq | MAHRGGRFLEVAGVAVRPAADGKALLPLLPAAAPSPVLPSWDPTAATPCSWVVAGGDVLAAKPGNVAFAFTTTLQVTSMAIKLTKYQ |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.369707 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0033700 | RBH | 4.520309 | 20.592641 | 22.944542 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0001510 | RBH | 1.278538 | 0.254889 | 1.946836 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0045400 | RBH | 6.902276 | 35.6135635 | 21.848731 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0001570 | RBH | 34.441418 | 22.022106 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0001460 | RBH | 3.071156 | 0.0 | 3.177739 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0001490 | RBH | 1.530817 | 5.844650 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0001510 | RBH | 1.707155 | 0.000000 | 1.218785 |
