Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_08G0136400		OGI:08025640 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr08:8981701-8984972		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		ATGGAAACCATGCTCTCTCTTCTCACACATGCCCTCCTCTTGCAAACAGTCACCTCTCAGACCATCAATGGTGATGATCTCTCAGCACTCTTGTCATTCAAATCCCTCATAAGGGATGACCCAAGAGAGGTGATGTCATCTTGGGACACCGCTGGCAATGGTACAAACATGCCAGCACCTGTCATCTGCCAATGGACTGGTGTTTCCTGCAACAATCGCCGGCATCCAGGTCGCGTAACCACTCTCCGTCTGAGTGGCGCTGGCCTAGTCGGCACCATCTCCCCTCAGCTCGGCAACCTGACCCACCTCCGTGTCCTTGATCTGTCAGCCAACAGCCTCGATGGTGATATCCCAGCTAGCCTTGGTGGTTGTCGAAAGCTTCGTACATTGAACTTGAGCACGAACCACCTGTCAGGTTCAATCCCTGATGATCTTGGTCAGTCATCAAAGCTTGCCATTTTCGATGTCGGCCACAACAATCTTACTGGTAATGTTCCCAAGTCATTCTCCAACCTCACAACACTTGTGAAGTTTATCATAGAGACGAACTTCATTGATGGCAAAGATTTGAGCTGGATGGGTAACCTCACATCATTGACACACTTCGTTCTTGAAGGGAACCGTTTCACTGGTAACATCCCTGAATCTTTTGGTAAAATGGCTAATCTTATTTACTTTAATGTCAAAGATAATCAGTTGGAAGGCCATGTTCCTCTACCGATCTTCAATATTTCTTCCATTAGATTCTTGGATCTTGGTTTCAACAGACTGTCAGGATCACTTCCACTCGATATTGGTTTTAAGCTTCCCAGGATAAAAATTTTTAGCACTATTGCTAACCATTTTGAGGGCATAATACCACCGACCTTCTCAAACGCATCTGCTCTCGAATCCTTGCAACTTCGTGGAAACAAATATCACGGCATGATTCCTAGGGAAATTGGCATCCATGGTAACCTGAAGTTCTTTGCGTTAGGAGACAATGTGCTCCAAGCCACACGGCCTAGTGATTTGGAATTTTTTACATCATTGACCAATTGTAGCAGCTTGCAAATGCTAGATGTTGGCCAGAACAACCTTGTTGGTGCAATGCCAATTAACATTGCAAACCTGAGCGGAGAGCTCTCATGGATTGACCTAAGTGGCAACCAATTAATTGGGACCATACCTGCAGATTTGTGGAAGCTTAAACTTACATCTCTCAACCTGTCATATAATCTCTTCACAGGAACTTTACCTCATGATATTGGCTGGCTTACAAGAATCAATTCTATCTATGTATCACATAATAGAATCACTGGGCAGATTCCACAATCATTAGGCAATGCCTCACAGTTGAGCTCTCTCACTTTGTCAAATAATTTTCTGGATGGAAGCATTCCATCAAGCCTTGGCAATCTCACAAAACTTCAATACTTGGATCTTTCCGGTAACGCCTTGATGGGCCAAATCCCACAAGAAATACTTACAATACCTTCCCTTACCAAACTTCTCAGCCTCTCCAACAATGCTCTAAGTGGCTCTATTCCAAGACAGATTGGGCTCTTGAACAGCCTTGTCAAAATGGATCTCTCAATGAATAAGCTATCTGGTGAAATCCCAAAAGCTATTGGCAGCTGTGTCCAATTGAGTTTCCTAAATTTCAAAGGAAATCTTCTCCAGGGACAAATACCAGAAAATCTGAACAATTTGAGGAGCCTTGAAATCCTTGATCTCTCTAACAACAACTTGGCAGGTCCCATACCTGAATTTCTAGCGAATTTCACGCTTCTAACTAATCTAAACCTCTCCTTCAACGCACTGTCAGGTCCTGTTCCAAATACAGGGATTTTTTGTAATGGCACTATAGTGTCACTCTCAGGTAATACAATGCTATGTGGCGGCCCTCCAGATTTGCAATTCCCTTCATGCCCATCTAAAGATTCAGACCAGGCTTCAGTGCATCGACTACATGTCTTAATCTTTTGCATTGTTGGAACTTTGATTTTCTCTTTGTTTTGTATGACTGCATACTGCTTCATTAAGACAAGGATGAAACCGAATATCATTGATAATGAAAACCTATTTCTTTATGAGACGAATGAGAGGATATCTTATGCCGAACTACAAGCAGCAACCGAGTCATTCTCACCGGCAAATTTGATTGGTTCTGGAAGCTTTGGCAATGTTTACATTGGAAATTTGATTATTGATCAGAATCTAGTACCTATTGCAGTCAAGGTTCTTAACCTTAGCCAACGAGGAGCCAGTAGAAGTTTCTTGACTGAGTGTGATGCTCTTAGGAGAATTCGACATCGGAAACTTGTCAAGGTGATCACCATATGCAGTGGATCAGACCAAAATGGTGATGAGTTCAAGGCGCTTGTCCTAGAATTCATTTGTAATGGAAGTTTAGATGAGTGGCTGCATGCAAGCACGGCAGCAATTAGCACAAGCTACAGAAGGCTAAATCTGATGAAAAGGCTGCATATTGCTCTTGATGTGGCAGAGGCATTGGAATATCTTCACCATCATATTGTGCCGCCTATAGTTCACTGTGATATTAAACCAAGCAACATTCTTTTAGACGATGACATGGTGGCGCATGTTACGGACTTTGGTCTAGCAAAGATAATCAATATTGCTGAACCGTGCAAAGAAAGCAGCTCATTTGTAATTAAAGGAACAATTGGATATGTTGCACCAGGTAAGTGGATATTATTCAACTCAACTATGTCAGGATCTCAATAATTATTTCCATTCTATATATTTTACTAGTTTAACAAAATGATACGATAGTATTTTAATGTGACCTAGCGATGCAAAAACAAAATGTAATATTGATGTTATATTTGACTGAAAATTGTAGTGCGAGATCCACCTTTTATCCCATACTCACTATGTATCCACTAAAACTTTTTTATGATTTATATATGTTTGCAGAATATGGCTCAGGATCTCCGGTCTCTATGGATGGGGACATATATAGCTATGGGGTGTTGTTGTTGGAAATGTTTACTGGAAGAAGACCAACTGACAATTTTATCAATGGTATGGCAAGTCTTATCGATTATGTCAAGACAGCCTATCCTAACAATCTATTGGAAATATTGGACACTAATGCAACCTACAATGGAAACACCCAAGATATGACACAACTAGTTGTTTATCCTATATTTCGACTTGGTCTAGCATGCTGCAAGGAATCACCAAGGGAAAGAATGAAGATGGATAATGTAGTCAAGGAATTGAATGCTATAAAGAAGGCATTCTCAGCTCATACATATGCCTGA More
CDS seq		ATGGAAACCATGCTCTCTCTTCTCACACATGCCCTCCTCTTGCAAACAGTCACCTCTCAGACCATCAATGGTGATGATCTCTCAGCACTCTTGTCATTCAAATCCCTCATAAGGGATGACCCAAGAGAGGTGATGTCATCTTGGGACACCGCTGGCAATGGTACAAACATGCCAGCACCTGTCATCTGCCAATGGACTGGTGTTTCCTGCAACAATCGCCGGCATCCAGGTCGCGTAACCACTCTCCGTCTGAGTGGCGCTGGCCTAGTCGGCACCATCTCCCCTCAGCTCGGCAACCTGACCCACCTCCGTGTCCTTGATCTGTCAGCCAACAGCCTCGATGGTGATATCCCAGCTAGCCTTGGTGGTTGTCGAAAGCTTCGTACATTGAACTTGAGCACGAACCACCTGTCAGGTTCAATCCCTGATGATCTTGGTCAGTCATCAAAGCTTGCCATTTTCGATGTCGGCCACAACAATCTTACTGGTAATGTTCCCAAGTCATTCTCCAACCTCACAACACTTGTGAAGTTTATCATAGAGACGAACTTCATTGATGGCAAAGATTTGAGCTGGATGGGTAACCTCACATCATTGACACACTTCGTTCTTGAAGGGAACCGTTTCACTGGTAACATCCCTGAATCTTTTGGTAAAATGGCTAATCTTATTTACTTTAATGTCAAAGATAATCAGTTGGAAGGCCATGTTCCTCTACCGATCTTCAATATTTCTTCCATTAGATTCTTGGATCTTGGTTTCAACAGACTGTCAGGATCACTTCCACTCGATATTGGTTTTAAGCTTCCCAGGATAAAAATTTTTAGCACTATTGCTAACCATTTTGAGGGCATAATACCACCGACCTTCTCAAACGCATCTGCTCTCGAATCCTTGCAACTTCGTGGAAACAAATATCACGGCATGATTCCTAGGGAAATTGGCATCCATGGTAACCTGAAGTTCTTTGCGTTAGGAGACAATGTGCTCCAAGCCACACGGCCTAGTGATTTGGAATTTTTTACATCATTGACCAATTGTAGCAGCTTGCAAATGCTAGATGTTGGCCAGAACAACCTTGTTGGTGCAATGCCAATTAACATTGCAAACCTGAGCGGAGAGCTCTCATGGATTGACCTAAGTGGCAACCAATTAATTGGGACCATACCTGCAGATTTGTGGAAGCTTAAACTTACATCTCTCAACCTGTCATATAATCTCTTCACAGGAACTTTACCTCATGATATTGGCTGGCTTACAAGAATCAATTCTATCTATGTATCACATAATAGAATCACTGGGCAGATTCCACAATCATTAGGCAATGCCTCACAGTTGAGCTCTCTCACTTTGTCAAATAATTTTCTGGATGGAAGCATTCCATCAAGCCTTGGCAATCTCACAAAACTTCAATACTTGGATCTTTCCGGTAACGCCTTGATGGGCCAAATCCCACAAGAAATACTTACAATACCTTCCCTTACCAAACTTCTCAGCCTCTCCAACAATGCTCTAAGTGGCTCTATTCCAAGACAGATTGGGCTCTTGAACAGCCTTGTCAAAATGGATCTCTCAATGAATAAGCTATCTGGTGAAATCCCAAAAGCTATTGGCAGCTGTGTCCAATTGAGTTTCCTAAATTTCAAAGGAAATCTTCTCCAGGGACAAATACCAGAAAATCTGAACAATTTGAGGAGCCTTGAAATCCTTGATCTCTCTAACAACAACTTGGCAGGTCCCATACCTGAATTTCTAGCGAATTTCACGCTTCTAACTAATCTAAACCTCTCCTTCAACGCACTGTCAGGTCCTGTTCCAAATACAGGGATTTTTTGTAATGGCACTATAGTGTCACTCTCAGGTAATACAATGCTATGTGGCGGCCCTCCAGATTTGCAATTCCCTTCATGCCCATCTAAAGATTCAGACCAGGCTTCAGTGCATCGACTACATGTCTTAATCTTTTGCATTGTTGGAACTTTGATTTTCTCTTTGTTTTGTATGACTGCATACTGCTTCATTAAGACAAGGATGAAACCGAATATCATTGATAATGAAAACCTATTTCTTTATGAGACGAATGAGAGGATATCTTATGCCGAACTACAAGCAGCAACCGAGTCATTCTCACCGGCAAATTTGATTGGTTCTGGAAGCTTTGGCAATGTTTACATTGGAAATTTGATTATTGATCAGAATCTAGTACCTATTGCAGTCAAGGTTCTTAACCTTAGCCAACGAGGAGCCAGTAGAAGTTTCTTGACTGAGTGTGATGCTCTTAGGAGAATTCGACATCGGAAACTTGTCAAGGTGATCACCATATGCAGTGGATCAGACCAAAATGGTGATGAGTTCAAGGCGCTTGTCCTAGAATTCATTTGTAATGGAAGTTTAGATGAGTGGCTGCATGCAAGCACGGCAGCAATTAGCACAAGCTACAGAAGGCTAAATCTGATGAAAAGGCTGCATATTGCTCTTGATGTGGCAGAGGCATTGGAATATCTTCACCATCATATTGTGCCGCCTATAGTTCACTGTGATATTAAACCAAGCAACATTCTTTTAGACGATGACATGGTGGCGCATGTTACGGACTTTGGTCTAGCAAAGATAATCAATATTGCTGAACCGTGCAAAGAAAGCAGCTCATTTGTAATTAAAGGAACAATTGGATATGTTGCACCAGAATATGGCTCAGGATCTCCGGTCTCTATGGATGGGGACATATATAGCTATGGGGTGTTGTTGTTGGAAATGTTTACTGGAAGAAGACCAACTGACAATTTTATCAATGGTATGGCAAGTCTTATCGATTATGTCAAGACAGCCTATCCTAACAATCTATTGGAAATATTGGACACTAATGCAACCTACAATGGAAACACCCAAGATATGACACAACTAGTTGTTTATCCTATATTTCGACTTGGTCTAGCATGCTGCAAGGAATCACCAAGGGAAAGAATGAAGATGGATAATGTAGTCAAGGAATTGAATGCTATAAAGAAGGCATTCTCAGCTCATACATATGCCTGA More
Protein seq		METMLSLLTHALLLQTVTSQTINGDDLSALLSFKSLIRDDPREVMSSWDTAGNGTNMPAPVICQWTGVSCNNRRHPGRVTTLRLSGAGLVGTISPQLGNLTHLRVLDLSANSLDGDIPASLGGCRKLRTLNLSTNHLSGSIPDDLGQSSKLAIFDVGHNNLTGNVPKSFSNLTTLVKFIIETNFIDGKDLSWMGNLTSLTHFVLEGNRFTGNIPESFGKMANLIYFNVKDNQLEGHVPLPIFNISSIRFLDLGFNRLSGSLPLDIGFKLPRIKIFSTIANHFEGIIPPTFSNASALESLQLRGNKYHGMIPREIGIHGNLKFFALGDNVLQATRPSDLEFFTSLTNCSSLQMLDVGQNNLVGAMPINIANLSGELSWIDLSGNQLIGTIPADLWKLKLTSLNLSYNLFTGTLPHDIGWLTRINSIYVSHNRITGQIPQSLGNASQLSSLTLSNNFLDGSIPSSLGNLTKLQYLDLSGNALMGQIPQEILTIPSLTKLLSLSNNALSGSIPRQIGLLNSLVKMDLSMNKLSGEIPKAIGSCVQLSFLNFKGNLLQGQIPENLNNLRSLEILDLSNNNLAGPIPEFLANFTLLTNLNLSFNALSGPVPNTGIFCNGTIVSLSGNTMLCGGPPDLQFPSCPSKDSDQASVHRLHVLIFCIVGTLIFSLFCMTAYCFIKTRMKPNIIDNENLFLYETNERISYAELQAATESFSPANLIGSGSFGNVYIGNLIIDQNLVPIAVKVLNLSQRGASRSFLTECDALRRIRHRKLVKVITICSGSDQNGDEFKALVLEFICNGSLDEWLHASTAAISTSYRRLNLMKRLHIALDVAEALEYLHHHIVPPIVHCDIKPSNILLDDDMVAHVTDFGLAKIINIAEPCKESSSFVIKGTIGYVAPEYGSGSPVSMDGDIYSYGVLLLEMFTGRRPTDNFINGMASLIDYVKTAYPNNLLEILDTNATYNGNTQDMTQLVVYPIFRLGLACCKESPRERMKMDNVVKELNAIKKAFSAHTYA
Function		Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_08G0136400	OsZS97_08T0136400.1	Chr08	8981701	8984972	+	makerRMon
CDS seq	ATGGAAACCATGCTCTCTCTTCTCACACATGCCCTCCTCTTGCAAACAGTCACCTCTCAGACCATCAATGGTGATGATCTCTCAGCACTCTTGTCATTCAAATCCCTCATAAGGGATGACCCAAGAGAGGTGATGTCATCTTGGGACACCGCTGGCAATGGTACAAACATGCCAGCACCTGTCATCTGCCAATGGACTGGTGTTTCCTGCAACAATCGCCGGCATCCAGGTCGCGTAACCACTCTCCGTCTGAGTGGCGCTGGCCTAGTCGGCACCATCTCCCCTCAGCTCGGCAACCTGACCCACCTCCGTGTCCTTGATCTGTCAGCCAACAGCCTCGATGGTGATATCCCAGCTAGCCTTGGTGGTTGTCGAAAGCTTCGTACATTGAACTTGAGCACGAACCACCTGTCAGGTTCAATCCCTGATGATCTTGGTCAGTCATCAAAGCTTGCCATTTTCGATGTCGGCCACAACAATCTTACTGGTAATGTTCCCAAGTCATTCTCCAACCTCACAACACTTGTGAAGTTTATCATAGAGACGAACTTCATTGATGGCAAAGATTTGAGCTGGATGGGTAACCTCACATCATTGACACACTTCGTTCTTGAAGGGAACCGTTTCACTGGTAACATCCCTGAATCTTTTGGTAAAATGGCTAATCTTATTTACTTTAATGTCAAAGATAATCAGTTGGAAGGCCATGTTCCTCTACCGATCTTCAATATTTCTTCCATTAGATTCTTGGATCTTGGTTTCAACAGACTGTCAGGATCACTTCCACTCGATATTGGTTTTAAGCTTCCCAGGATAAAAATTTTTAGCACTATTGCTAACCATTTTGAGGGCATAATACCACCGACCTTCTCAAACGCATCTGCTCTCGAATCCTTGCAACTTCGTGGAAACAAATATCACGGCATGATTCCTAGGGAAATTGGCATCCATGGTAACCTGAAGTTCTTTGCGTTAGGAGACAATGTGCTCCAAGCCACACGGCCTAGTGATTTGGAATTTTTTACATCATTGACCAATTGTAGCAGCTTGCAAATGCTAGATGTTGGCCAGAACAACCTTGTTGGTGCAATGCCAATTAACATTGCAAACCTGAGCGGAGAGCTCTCATGGATTGACCTAAGTGGCAACCAATTAATTGGGACCATACCTGCAGATTTGTGGAAGCTTAAACTTACATCTCTCAACCTGTCATATAATCTCTTCACAGGAACTTTACCTCATGATATTGGCTGGCTTACAAGAATCAATTCTATCTATGTATCACATAATAGAATCACTGGGCAGATTCCACAATCATTAGGCAATGCCTCACAGTTGAGCTCTCTCACTTTGTCAAATAATTTTCTGGATGGAAGCATTCCATCAAGCCTTGGCAATCTCACAAAACTTCAATACTTGGATCTTTCCGGTAACGCCTTGATGGGCCAAATCCCACAAGAAATACTTACAATACCTTCCCTTACCAAACTTCTCAGCCTCTCCAACAATGCTCTAAGTGGCTCTATTCCAAGACAGATTGGGCTCTTGAACAGCCTTGTCAAAATGGATCTCTCAATGAATAAGCTATCTGGTGAAATCCCAAAAGCTATTGGCAGCTGTGTCCAATTGAGTTTCCTAAATTTCAAAGGAAATCTTCTCCAGGGACAAATACCAGAAAATCTGAACAATTTGAGGAGCCTTGAAATCCTTGATCTCTCTAACAACAACTTGGCAGGTCCCATACCTGAATTTCTAGCGAATTTCACGCTTCTAACTAATCTAAACCTCTCCTTCAACGCACTGTCAGGTCCTGTTCCAAATACAGGGATTTTTTGTAATGGCACTATAGTGTCACTCTCAGGTAATACAATGCTATGTGGCGGCCCTCCAGATTTGCAATTCCCTTCATGCCCATCTAAAGATTCAGACCAGGCTTCAGTGCATCGACTACATGTCTTAATCTTTTGCATTGTTGGAACTTTGATTTTCTCTTTGTTTTGTATGACTGCATACTGCTTCATTAAGACAAGGATGAAACCGAATATCATTGATAATGAAAACCTATTTCTTTATGAGACGAATGAGAGGATATCTTATGCCGAACTACAAGCAGCAACCGAGTCATTCTCACCGGCAAATTTGATTGGTTCTGGAAGCTTTGGCAATGTTTACATTGGAAATTTGATTATTGATCAGAATCTAGTACCTATTGCAGTCAAGGTTCTTAACCTTAGCCAACGAGGAGCCAGTAGAAGTTTCTTGACTGAGTGTGATGCTCTTAGGAGAATTCGACATCGGAAACTTGTCAAGGTGATCACCATATGCAGTGGATCAGACCAAAATGGTGATGAGTTCAAGGCGCTTGTCCTAGAATTCATTTGTAATGGAAGTTTAGATGAGTGGCTGCATGCAAGCACGGCAGCAATTAGCACAAGCTACAGAAGGCTAAATCTGATGAAAAGGCTGCATATTGCTCTTGATGTGGCAGAGGCATTGGAATATCTTCACCATCATATTGTGCCGCCTATAGTTCACTGTGATATTAAACCAAGCAACATTCTTTTAGACGATGACATGGTGGCGCATGTTACGGACTTTGGTCTAGCAAAGATAATCAATATTGCTGAACCGTGCAAAGAAAGCAGCTCATTTGTAATTAAAGGAACAATTGGATATGTTGCACCAGAATATGGCTCAGGATCTCCGGTCTCTATGGATGGGGACATATATAGCTATGGGGTGTTGTTGTTGGAAATGTTTACTGGAAGAAGACCAACTGACAATTTTATCAATGGTATGGCAAGTCTTATCGATTATGTCAAGACAGCCTATCCTAACAATCTATTGGAAATATTGGACACTAATGCAACCTACAATGGAAACACCCAAGATATGACACAACTAGTTGTTTATCCTATATTTCGACTTGGTCTAGCATGCTGCAAGGAATCACCAAGGGAAAGAATGAAGATGGATAATGTAGTCAAGGAATTGAATGCTATAAAGAAGGCATTCTCAGCTCATACATATGCCTGA More
Protein seq	METMLSLLTHALLLQTVTSQTINGDDLSALLSFKSLIRDDPREVMSSWDTAGNGTNMPAPVICQWTGVSCNNRRHPGRVTTLRLSGAGLVGTISPQLGNLTHLRVLDLSANSLDGDIPASLGGCRKLRTLNLSTNHLSGSIPDDLGQSSKLAIFDVGHNNLTGNVPKSFSNLTTLVKFIIETNFIDGKDLSWMGNLTSLTHFVLEGNRFTGNIPESFGKMANLIYFNVKDNQLEGHVPLPIFNISSIRFLDLGFNRLSGSLPLDIGFKLPRIKIFSTIANHFEGIIPPTFSNASALESLQLRGNKYHGMIPREIGIHGNLKFFALGDNVLQATRPSDLEFFTSLTNCSSLQMLDVGQNNLVGAMPINIANLSGELSWIDLSGNQLIGTIPADLWKLKLTSLNLSYNLFTGTLPHDIGWLTRINSIYVSHNRITGQIPQSLGNASQLSSLTLSNNFLDGSIPSSLGNLTKLQYLDLSGNALMGQIPQEILTIPSLTKLLSLSNNALSGSIPRQIGLLNSLVKMDLSMNKLSGEIPKAIGSCVQLSFLNFKGNLLQGQIPENLNNLRSLEILDLSNNNLAGPIPEFLANFTLLTNLNLSFNALSGPVPNTGIFCNGTIVSLSGNTMLCGGPPDLQFPSCPSKDSDQASVHRLHVLIFCIVGTLIFSLFCMTAYCFIKTRMKPNIIDNENLFLYETNERISYAELQAATESFSPANLIGSGSFGNVYIGNLIIDQNLVPIAVKVLNLSQRGASRSFLTECDALRRIRHRKLVKVITICSGSDQNGDEFKALVLEFICNGSLDEWLHASTAAISTSYRRLNLMKRLHIALDVAEALEYLHHHIVPPIVHCDIKPSNILLDDDMVAHVTDFGLAKIINIAEPCKESSSFVIKGTIGYVAPEYGSGSPVSMDGDIYSYGVLLLEMFTGRRPTDNFINGMASLIDYVKTAYPNNLLEILDTNATYNGNTQDMTQLVVYPIFRLGLACCKESPRERMKMDNVVKELNAIKKAFSAHTYA More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	1.3248695	0.1704665	0.6135175

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_08g0248100	SBH	0.000000	0.0	0.297710
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os08g14990	SBH	0.000000	0.0	0.073969
Nipponbare \| IRGSP 1.0 \| RAP-db	Os08g0248100	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_08g0008560	SBH	0.0	3.680730	0.560007
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_08g0008570	RBH	0.616447	0.0	0.077008
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_08g0008700	RBH	0.185113	0.953826	1.790319
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_08g0008570	SBH	0.0	0.043443	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_08g0008490	SBH	0.232796	3.473220	3.019099
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_08G0142600	SBH	0.6176465	4.5846425	0.0077845
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_08g0008520	SBH	0.029490	0.000000	0.000000
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_08G0136300	SBH	0.895194	0.1415615	0.4255935
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_08g0008040	RBH	0.486234	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_08g0008250	SBH	0.0	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_08g0008100	SBH	0.0	10.238196	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_08g0008820	SBH	0.046271	0.488347	0.271633
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_08g0008250	SBH	0.0	1.022617	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_08G008510	SBH	0.0	0.787105	0.274423
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_08g0008300	SBH	0.0	0.0	0.716900

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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