Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_06G0460000		OGI:06084800 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr06:31289577-31293116		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		OsSTA177, RLCK218, OsRLCK218
DNA seq		CTTCCCCTCAAGTTCGCATGAATTTCACATGGTTTGCACGAATTTCACACGGTTTACGTAGATTTATAGGTTTTTCATAAGAACTCTACAGAACTGTAAGATTATATCTTGCAGCAAACTGGGAAATCTTGTGCAATCGAAACACTTTGCATGCTCCAAATTATTCGCATTGATCATCATCTCTCTCTACAATACAAATGAATCAATGATCGATCTCTCCACAATTTGTTCCTCACGCACTGGTTGACCGTCGTTGACCGCAGCCTCCTCCGGTGACTGATCTGACGTCACCTCTTCGCCGGCGGCAGGCGGCGGTCGCCGTCCTTGTCGGCCGCCGTCGTCGTCGGTGGCTCCATCTGGAGCACCCTCTCGAGCTCCTCGACGACCTCCCTCATCGCCGGTCGCTCCTTGGGGTTCTTGACGAGGCAGCGGTCGGCCAGCCGCGCCACCTGCCGCGCCGCCGCCGCCGGGTACCGGCCGCCCAGCCGCGGGTCCATGATCGACCGGAAGCTCTGGCTCTCCGGCGGGTGGCGGCGCACCCACCCCAGCAGCTTCTGCTCCTCCGCCGGCCGGCTCCGCTCCAGCGACCGCCGCCCCGTCAGGATCTCGTACAGCACCACGCCGAAGCTCCACACGTCGCTCTTGGTCGTCAGGTGCCCCGTCTCGATGTAGTCCGGCGCCGCGTACCCGTGCGTCCCCACCACCTGATCGCCGCCGGCGAGATCGCCATCATCATCATCATCACTCGGGCTCATGGATCGGATGGGATGAATTGATTGTTCGCAATGGATTTTGCACTTACCGCGGTGGAGACGTGTGTCTTTCCTTCAGTTGGCCCCTCTCTTGCTAGCCCAAAGTCTGAAAGTTTTGGCTTGAAATCGGCATCAAGAAGAACATTGGCTGCCTTGAAATCCCTGTATATCACCTGCCAGACTAAGAAACTACGGATCAGAATTCAGATATTTGGCACAGATTTCAGATTGATCATATCGTTCTTGAACCTAACAGAATTCAGATAGGACAATGCTTACTAGTAGCAATACTACAGATGCTAAACTAATGGTTCAGTTAAGAGTTTCAGAGTTCAGAATTCAGATATTGGGACAGATACCAGATTGATCATATCATTCTTGAACAATAAAGAATTCAGATAGGACAATGCTTACTACTAGCTGCTACAGGTGCTAAACTAATGGTCCAGCTCAGAGTTTCAGAGTTCAAAATTCAGATATTGGGAAGATGCCAGATTGATCATATCATACTTGAACATTAAAGAATTCAGATAGGACAAGGCTTACTACTAGCTACCGCAGGTGCTAAACTAATGGTTCAGTTCAGAGTTTCAGAATTCAGACAATGTATCCTGTGAGGCATCTATATTTTGAGTTTTATGGATTCAGAGAGGAGGACAATGCTTTGGAGGGCACCTGAACTTCTTGCAGGCCTTCATGGAGGTAGTCTAGGCCCCGCGCGGCGCCGATCATGATCTGCAGCCTCAATCTCCACGAGAGGGGAGGATGAGCTCGGTTGAACAGATGATCATCTAGGCTCTTGTTGGGCATGAACTCGTAGACCAGCAGCCTGTGCTTGCTTGTTTCTGAATCCACTGCACAATAGCCAACAAGCCTCACTAGATTCGGGTGCTCAAGAACACCTAGGAATTGGACCTCAGCCAGCCATTGCTTGTGCCCCTGAAATCAGAAAAAAAAAAGAAAAACATAACTTTCAATCTGTTGATATTTAAAAAAAAATGCAATCTTTGATTTAACAATTGAAAATTGCATGGATTTTGTCCTATGCACTGGCAATCTGGCATCAAGTTTTGGCGTGATTAAGCTTGGTACGTTGTTTATAACGTGATTCTGAATTCTGGAATTTAGTAGGTTGACTTGGGATGCTGTCCGGACCATTGTTCACGTGGTTTGGTGTGTGATCTGTGGTTGAAGTTGACATGTGTGGGTGTCCTTGTCCTACGGGATGTGTTTATCTATTTATGGAATTGTCACGAGGCTAAGAATTTCATATGATTTCGGTGCAAAAGAACAATATCCTGAGTTTGATTTTAGGTCTCGATCCAAATCCAAATCAGGATCGCTTGTTGGTAACTATTGCTGGTTGAAGAACATTTTCAGCAGTAGTAAATCTGTAGTGTTAGCATACCAAAATGTGTGAATCCGAAAAATATATATTTAAGTGCATGCCGTCTTTCTGAATCTTCTGTGAAGATTGTACGCTACGAGTCTTGAATGTAGTCTAGAGAAAGTAAAAGCGAAGTTCTTTTTTGAAACTCTGAAAAAACATGCAGCCATGTGGTCAGTGCCCAAGCTGAAAAGACAAAATCTTCAAGTTCTTCTTTTGCCATTCAATCGTCCTGATGAACAAATTCGGTACGTTTTGACAAATCTAGCCAAAATCAAATGCACCATGGCGAATTTTCGAGAGGAGCAAATGCAAATCAGAGGGAGGAGAGATGGGAGTACAGCTAACTGATACTGTACTGACCTGCAGGCTGCGCTGGTTGAGGCGCTTGACGGCGAGGACGACCCGGCCGCCGCCGCCGCCGGCGGCGGAGCGGAAGAAGGCGCGGTAGACGGAGCCGAAGCCGCCCTCGCCGATCTTGAGCGCGCGGCTGAAGCCGTTGGTGGCGCTGCTGAGCTCGTCGAGGTCGAACACCCGCAGCCGCTGCGCGCCCCTCTCGTCCGACAGCTCCTGGATGCTCCTCGTCGGCGTCGACGCCGATGATGCCTTGCTCTTCTGCCCGTCCGACGTCGGCGCCGGCGACCTGGCCCCCGACGCCGCCGCCCGCTGGTTCTTGGCCTTGCTCTTGAACGCGAAGCACCCCATATCTGATGGGCTAGCAAATTAAACCTGAGAGGAGGCCTCCTTGCTGATTAAAAACACCAAGAACCAAATCTTTGGAGAGTAGCATCCGAAAAAAAAGACCAAGAACTCTACTAATTGGAGACACTTTTAATCCCAGTGAGAGAGAGCTCAAATTAGCTTTGATAAAGACAGCTAAAATTGCATGGAAAAATTAACACGAGGAGGAACTAGGAAGACGACGACGTCATATGGATCATGTGGTTGGAATCCATGAACAAGTGGGGGGCGAGAAGAAGAAGAAGAAGAAGACGACTCGCGTGGAATCAATCGAGAGAGAAAAGAGGACACGTACCGTCGCCTCGCCTCGCCTCGCTTCCGCGTCGTTCGTTCGCGGCGATCCCAACGCACACGCCGCGTCTCCTACTTGTACCATCACACTAACTGTACACCAGTCAACAAGATCAATGAAGAGAGAGTGTACTGTTCTTAATTGTTTTTTTCTTAGGATAAAATCATAAAATAATAAGGAAATTTATTGTTACAATCAACATAGCATGGAGGAATGAATATACTTACCTCACCTGATTCATTGCTCCATATCTGCATATCAGCATCTTTCTTTCTTCAACGTGTTCACGTCAAAATTGAAAGTTTAGTTGAAATTGAAACGATGTGACGGAAAAGTTGTAAGTTTGTGTGTAGAAAAGTTTTGATGTG More
CDS seq		ATGGGGTGCTTCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAGATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCATGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGATATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAAAACTTTCAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACACACGTCTCCACCGCGGTGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCAAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCGCTGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGCGACCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGA More
Protein seq		MGCFAFKSKAKNQRAAASGARSPAPTSDGQKSKASSASTPTRSIQELSDERGAQRLRVFDLDELSSATNGFSRALKIGEGGFGSVYRAFFRSAAGGGGGRVVLAVKRLNQRSLQGHKQWLAEVQFLGVLEHPNLVRLVGYCAVDSETSKHRLLVYEFMPNKSLDDHLFNRAHPPLSWRLRLQIMIGAARGLDYLHEGLQEVQVIYRDFKAANVLLDADFKPKLSDFGLAREGPTEGKTHVSTAVVGTHGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRRSLERSRPAEEQKLLGWVRRHPPESQSFRSIMDPRLGGRYPAAAARQVARLADRCLVKNPKERPAMREVVEELERVLQMEPPTTTAADKDGDRRLPPAKR
Function		Probable serine/threonine-protein kinase PBL19 [UniProtKB/Swiss-Prot:Q9LTC0]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_06G0460000	OsZS97_06T0460000.1	Chr06	31289577	31293116	-	makerRMon
CDS seq	ATGGGGTGCTTCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAGATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCATGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGATATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAAAACTTTCAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACACACGTCTCCACCGCGGTGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCAAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCGCTGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGCGACCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGA More
Protein seq	MGCFAFKSKAKNQRAAASGARSPAPTSDGQKSKASSASTPTRSIQELSDERGAQRLRVFDLDELSSATNGFSRALKIGEGGFGSVYRAFFRSAAGGGGGRVVLAVKRLNQRSLQGHKQWLAEVQFLGVLEHPNLVRLVGYCAVDSETSKHRLLVYEFMPNKSLDDHLFNRAHPPLSWRLRLQIMIGAARGLDYLHEGLQEVQVIYRDFKAANVLLDADFKPKLSDFGLAREGPTEGKTHVSTAVVGTHGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRRSLERSRPAEEQKLLGWVRRHPPESQSFRSIMDPRLGGRYPAAAARQVARLADRCLVKNPKERPAMREVVEELERVLQMEPPTTTAADKDGDRRLPPAKR More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_06G0460000	OsZS97_06T0460000.2	Chr06	31289577	31293116	-	makerRMon
CDS seq	ATGGGGTGCTTCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAGATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCATGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGATATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAAAACTTTCAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACACACGTCTCCACCGCGGTGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCAAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCGCTGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGCGACCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGA More
Protein seq	MGCFAFKSKAKNQRAAASGARSPAPTSDGQKSKASSASTPTRSIQELSDERGAQRLRVFDLDELSSATNGFSRALKIGEGGFGSVYRAFFRSAAGGGGGRVVLAVKRLNQRSLQGHKQWLAEVQFLGVLEHPNLVRLVGYCAVDSETSKHRLLVYEFMPNKSLDDHLFNRAHPPLSWRLRLQIMIGAARGLDYLHEGLQEVQVIYRDFKAANVLLDADFKPKLSDFGLAREGPTEGKTHVSTAVVGTHGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRRSLERSRPAEEQKLLGWVRRHPPESQSFRSIMDPRLGGRYPAAAARQVARLADRCLVKNPKERPAMREVVEELERVLQMEPPTTTAADKDGDRRLPPAKR More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_06G0460000	OsZS97_06T0460000.3	Chr06	31289577	31293116	-	makerRMon
CDS seq	ATGGGGTGCTTCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAGATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCATGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGATATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAAAACTTTCAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACACACGTCTCCACCGCGGTGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCAAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCGCTGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGCGACCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGA More
Protein seq	MGCFAFKSKAKNQRAAASGARSPAPTSDGQKSKASSASTPTRSIQELSDERGAQRLRVFDLDELSSATNGFSRALKIGEGGFGSVYRAFFRSAAGGGGGRVVLAVKRLNQRSLQGHKQWLAEVQFLGVLEHPNLVRLVGYCAVDSETSKHRLLVYEFMPNKSLDDHLFNRAHPPLSWRLRLQIMIGAARGLDYLHEGLQEVQVIYRDFKAANVLLDADFKPKLSDFGLAREGPTEGKTHVSTAVVGTHGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRRSLERSRPAEEQKLLGWVRRHPPESQSFRSIMDPRLGGRYPAAAARQVARLADRCLVKNPKERPAMREVVEELERVLQMEPPTTTAADKDGDRRLPPAKR More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_06G0460000	OsZS97_06T0460000.4	Chr06	31289577	31293116	-	makerRMon
CDS seq	ATGGGGTGCTTCGCGTTCAAGAGCAAGGCCAAGAACCAGCGGGCGGCGGCGTCGGGGGCCAGGTCGCCGGCGCCGACGTCGGACGGGCAGAAGAGCAAGGCATCATCGGCGTCGACGCCGACGAGGAGCATCCAGGAGCTGTCGGACGAGAGGGGCGCGCAGCGGCTGCGGGTGTTCGACCTCGACGAGCTCAGCAGCGCCACCAACGGCTTCAGCCGCGCGCTCAAGATCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGCCTTCTTCCGCTCCGCCGCCGGCGGCGGCGGCGGCCGGGTCGTCCTCGCCGTCAAGCGCCTCAACCAGCGCAGCCTGCAGGGGCACAAGCAATGGCTGGCTGAGGTCCAATTCCTAGGTGTTCTTGAGCACCCGAATCTAGTGAGGCTTGTTGGCTATTGTGCAGTGGATTCAGAAACAAGCAAGCACAGGCTGCTGGTCTACGAGTTCATGCCCAACAAGAGCCTAGATGATCATCTGTTCAACCGAGCTCATCCTCCCCTCTCGTGGAGATTGAGGCTGCAGATCATGATCGGCGCCGCGCGGGGCCTAGACTACCTCCATGAAGGCCTGCAAGAAGTTCAGGTGATATACAGGGATTTCAAGGCAGCCAATGTTCTTCTTGATGCCGATTTCAAGCCAAAACTTTCAGACTTTGGGCTAGCAAGAGAGGGGCCAACTGAAGGAAAGACACACGTCTCCACCGCGGTGGTGGGGACGCACGGGTACGCGGCGCCGGACTACATCGAGACGGGGCACCTGACGACCAAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGTCGCTGGAGCGGAGCCGGCCGGCGGAGGAGCAGAAGCTGCTGGGGTGGGTGCGCCGCCACCCGCCGGAGAGCCAGAGCTTCCGGTCGATCATGGACCCGCGGCTGGGCGGCCGGTACCCGGCGGCGGCGGCGCGGCAGGTGGCGCGGCTGGCCGACCGCTGCCTCGTCAAGAACCCCAAGGAGCGACCGGCGATGAGGGAGGTCGTCGAGGAGCTCGAGAGGGTGCTCCAGATGGAGCCACCGACGACGACGGCGGCCGACAAGGACGGCGACCGCCGCCTGCCGCCGGCGAAGAGGTGA More
Protein seq	MGCFAFKSKAKNQRAAASGARSPAPTSDGQKSKASSASTPTRSIQELSDERGAQRLRVFDLDELSSATNGFSRALKIGEGGFGSVYRAFFRSAAGGGGGRVVLAVKRLNQRSLQGHKQWLAEVQFLGVLEHPNLVRLVGYCAVDSETSKHRLLVYEFMPNKSLDDHLFNRAHPPLSWRLRLQIMIGAARGLDYLHEGLQEVQVIYRDFKAANVLLDADFKPKLSDFGLAREGPTEGKTHVSTAVVGTHGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRRSLERSRPAEEQKLLGWVRRHPPESQSFRSIMDPRLGGRYPAAAARQVARLADRCLVKNPKERPAMREVVEELERVLQMEPPTTTAADKDGDRRLPPAKR More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	4.4097055	8.267395	3.033364

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_06g0714900	RBH	1.915914	2.863142	5.813877
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os06g50100	RBH	1.636353	1.799629	1.193064
Nipponbare \| IRGSP 1.0 \| RAP-db	Os06g0714900	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_06g0029090	RBH	0.303555	0.000000	1.540230
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_06g0028910	RBH	0.645190	0.000000	0.477945
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_06g0029050	RBH	1.270808	3.960706	3.394549
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_06g0028610	RBH	0.140829	0.066651	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_06g0029100	RBH	2.321355	4.167887	3.747812
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_06G0476300	RBH	2.9345005	6.1319715	3.600995
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_06g0028470	RBH	0.230017	0.389677	0.811528
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_09G0339500	SBH	3.1533475	21.3385545	6.0202795
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_06g0029000	RBH	0.244800	0.068727	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_06g0029080	RBH	0.248181	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_06g0028650	RBH	0.000000	5.532347	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_06g0029300	RBH	0.321930	0.278887	0.621132
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_06g0028940	RBH	0.311336	2.943203	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_06G028820	RBH	0.778140	0.486558	0.879088
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_06g0028920	RBH	1.436412	3.591503	7.077378

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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