Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_06G0370500 | OGI:06070230 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr06:25853545-25854640 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCATCGGCATCGTATCTGATCTTACTTGTCAACTGCTGCAGCTTCTTGAGCAGCCTGAATACTGACCAACTTAGTCATGTTGAGGAGTTGAACGTGAAGAGCTGCACAGATCCAATGCCAGCTTGTGGATTTATCGGACTTAGCTCCCTTAAGGTGCTTAGAATCAGCAACTGTTCAGCGTTACTATCGTCAGTTTGTGTGGAAGCAGGTGAAGAACTTGACACATGTTTTTTCCCTCAGTCACTAAGTGAACTTGAAATAGTTGATTGCAATATTCAGTCCAGTTTGCTACCAAGATACTTGCAAGGCCTAACTAACCTCTCGGTGCTGGTGATTAATAGCTGTGATTCTATGGATTTGCTATCTCTTGCTTATGGACCCCATCACCTTACTTCTCTAGAAGCCATAATCATTAAAGACTGTATTTTCCTATCCTCATTGGATGGATTTGAAAATCTGATTGCTCTCAGAAAGTTAGTGGTAGCAGATTGTAAAAATTTCTGTTTCTTGCCAGCTGATCTGAATGCATTAATATCTCTCAAAACATTAGCCATTTATGGGTGCCCTAAGATGAAATTTCTCCCCCAGAATGGTGTACCAGCTTCTCTACAGTTAATTTTGCTGTCACTGTTGCATCCAGAGTTAGACAGACAGCTTCAAAGGAGGGAAGGTACTGAATGGGACAAGATTGCTCATGTTCCTGAAAAGAAACTAGAGGTATGCAGTGCTTGTTATTTATTTCCATCGTATTCTGATGGGGTTCGTTGTTCATATCGCCTTACTTACTGTATGTAGTGTTGTGTCATGTAAATATATGTGTGGTTGTTGCTCAAGCTGCATTATTATCAGTGATTCAGTGTTATGAATCATGATCTACAAATAAGTGTCAAGTATCTCAGTTTGCTATTTGATTTGCAAATTCTTCTGGAGATGTTTTTGGCAAAAATATCATGAAGTTTCATAATGGCACACCTAAGTCCTAACTGTCTTAGCATATAGTTCCTTGACAGAGTTCAGTCTTGTACTAATACTTAACCTCTTGCAGGTAGAGCTAATTGATTTGTTGACACTGTTTCCATCCAGTTCTTTCTGA
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| CDS seq | ATGGCATCGGCATCGTATCTGATCTTACTTGTCAACTGCTGCAGCTTCTTGAGCAGCCTGAATACTGACCAACTTAGTCATGTTGAGGAGTTGAACGTGAAGAGCTGCACAGATCCAATGCCAGCTTGTGGATTTATCGGACTTAGCTCCCTTAAGGTGCTTAGAATCAGCAACTGTTCAGCGTTACTATCGTCAGTTTGTGTGGAAGCAGAGTTAGACAGACAGCTTCAAAGGAGGGAAGGTACTGAATGGGACAAGATTGCTCATGTTCCTGAAAAGAAACTAGAGGTAGAGCTAATTGATTTGTTGACACTGTTTCCATCCAGTTCTTTCTGA |
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| Protein seq | MASASYLILLVNCCSFLSSLNTDQLSHVEELNVKSCTDPMPACGFIGLSSLKVLRISNCSALLSSVCVEAELDRQLQRREGTEWDKIAHVPEKKLEVELIDLLTLFPSSSF |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_06G0370500 | OsZS97_06T0370500.1 | Chr06 | 25853545 | 25854640 | + | makerRMon | ||
| CDS seq | ATGGCATCGGCATCGTATCTGATCTTACTTGTCAACTGCTGCAGCTTCTTGAGCAGCCTGAATACTGACCAACTTAGTCATGTTGAGGAGTTGAACGTGAAGAGCTGCACAGATCCAATGCCAGCTTGTGGATTTATCGGACTTAGCTCCCTTAAGGTGCTTAGAATCAGCAACTGTTCAGCGTTACTATCGTCAGTTTGTGTGGAAGCAGAGTTAGACAGACAGCTTCAAAGGAGGGAAGGTACTGAATGGGACAAGATTGCTCATGTTCCTGAAAAGAAACTAGAGGTAGAGCTAATTGATTTGTTGACACTGTTTCCATCCAGTTCTTTCTGA
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| Protein seq | MASASYLILLVNCCSFLSSLNTDQLSHVEELNVKSCTDPMPACGFIGLSSLKVLRISNCSALLSSVCVEAELDRQLQRREGTEWDKIAHVPEKKLEVELIDLLTLFPSSSF |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.1885225 | 5.7780645 | 5.508764 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0619000 | SBH | 0.568805 | 0.744070 | 1.235759 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g41480 | SBH | 0.380811 | 0.501021 | 0.314929 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0619000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0022540 | SBH | 0.244692 | 6.053720 | 1.994734 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0022390 | SBH | 0.080377 | 1.099353 | 0.459222 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0022490 | SBH | 0.332107 | 3.414849 | 2.675934 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0022210 | SBH | 0.000000 | 0.127732 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0022140 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G022160 | SBH | 0.119358 | 0.488207 | 0.710469 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
