Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_05G0374700		OGI:05064060 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr05:24332477-24336136		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		ATGGAGTCCGCGGTGGCGAGCGCATTCTTGAAGGCCGTGATGGGGAGGCTGTTCATGGCGCTGGAGAAGGAGTACAGCAAGCACAAGGGCCTCGCGCAAGAAGCCCAGTCCCTCCAGCTCGACCTCCGCATGATCGCCGCCGTCATGGACGACCAGCTCCGCGCCATGGGGAGGGCGACGACGGCCGACGCCCGCACGGCCGTCGCGCGGCTCCACGCCGAGGAGATGCTCGACCTCGCGCACGACGTCGAGGAGTGCGTCGACCGCTTCCTGCACCGCCTCACCTGCAGGCAGCACCGCGGCGGCGCCGGCGCCGGAGCGTCGTCGTCGTCCTTGGTGCGGCGGATGGCGCACGAGCTCAGCAAGGTCCAGAGCCGGTCGAGCTTCGCCGACGAGATCCAGAGGCTCAAGACGCGCGTCAGGGAAGCGCAGCAGCGGATCATCCGCATGAAACCTACTTTGGATGTCCTCGCCGGCGGTGGCGGTGGCGGCGGCCAACTCACAGGCGCTGCCGGCACATCGTCGACGGCGCCGTCGTGCCGCGCGTCGCGCATCCCGGTGGGCATCGCGGAGCCCGTGGAGGAGCTCCTGTCGATGCTGGACGAGGTGGACGGCGAGCCGGAGCAGATGAGGGTCATCTCCGTCGTCGGATTCGGTGGCTCCGGGAAGACCACCCTCGTGAAGGCGGTCTACGATGATCCTCGCGCAAAGGACAGATTCTCCCGCCGCGCGTGGGTCACCGTCGGTAGCTCGCCGTCGCCGGAGACCAGCAATGGGATGAAGGGGATCCTGCGTGCTGTATTCCAGCAGGTTCTTCCCAAAGACGCCATGGATGCTGACGGACAACATCTTGAAACCTCGCTCAAAGAATACCTGAAGGACAAGAGGTTAGTGCACATTTAACATTTTTCTTTTTTTTTAACTACTTTCATATGCAAAATTTAACTTTTAATCGGACTTTTGCTCATCATTCATCAATTTGACTGTCGTGTGTATATATTGATCAGGGTTCACTGTTTTGGAATCCCAAAAAAAAAATCAGGGAAAGGAAATTTCAGACAAAAAAATAGTTTTGAAAACTTCTTTGCTAAATTCAAACAAATTCTGAAAACAGGCACTCACCGGTGGACACAAATATTTGAATCAAGATTATGAACCCTGTTACCCTGATACTGATCAGCAGAATTTATGTTTTACCACTTAATTTTGCTACTCATTTCTCAATTTGGTTATTAGGTATTTAATTATCATCGATGACATCGGGATGGATCAATGGAACATCATAAGATCGACCTTTGAAGACAATGGTACAAGCAGCAGGATAATACTGACCACAACCATCCAGTCTGTGGCAAATATGTGCAGCCATGGCAATGGCTATGTGTATCAAATGAACACACTTGGTGAAGAAGACTCTAAGGAACTCGCTTTTCCAGGGTTTAGATCACCTGAGTTGGAGCAAGGTTCAGCATCATTATTGGGGAAATGTGATGGTCTTCCTCTTGCTCTGGTCAGTGTCTCCGATTATCTGAAGAGCTCAAATGAGCCCACAGGAGAGCTGTGCGCAAAGCTGTGCCGCAACCTTGGTTCTCATCTGAAAGAGCAGGATGGCCATTACAGCTTTTCAGAACTCAGAAAGGTGCTCCTTGACAACTATGACAGTTTTTCTGGCTATCCTTTGAGCTGCTTGCTGTATCTTGGAATATTTCCAAACAATCGACCACTCAAGAAGAAAGTTGTAATCAGGCGGTGGTTAGCCGAAGGATATGCACGAACCGACTCTCTTCGTAGCGAAGAGGATATTGCTGATGAGAATTTCAGTAAGCTTATTGACCGGAATATCATTCAGCCTGTTGACACAAGAAACAATTCTGAAGTGAAAACCTGTAAAACTCATGGAATTATGCACGAGTTTTTGCTGAACAAGTCCTTGTCACAGATATTCATCGCGAAATCGTCTCATGATCATCCAAGACTAGGTGTCAATACTAATGCGTGCCACCTTTCTTTTCATTCTGGTGAACTGACAGAGTGTGTGGCATCTGATGAAGAGTTATCTCGTGTCCGGTCTCTGACAGTCTTTGGGCATGCAGGTGATGCAATTTGTTATGTTCGCAGGTGCAAACTGATACGAGTCTTGGATCTACAGGAATGCAGTGATTTGGATGACGGTCATCTGAAATACATATGCAAATTATGGCATCTGAAATACCTGAGCTTTGGGAGCAATATCAGTGAGCTTCCAAGGAGCATTGATGGACTGCATTGTTTAGAGACACTGGATTTAAGGAGGACCCAGATAAAGTTTTTGCCCATTGAAGCAATCATGCTGCCCCACTTAGCTCACCTGTTTGGAAAGTTTATGCTTCATGAAGATGATGTGAAGAGTGTGAACAAGATGAGTAAACTACAAAAATTCTTTTCTTCCAAAAAGAGCAATCTGCAAACTTTAGCAGGATTTATCACTGACGAAAGCAAAGGTTTTCTGCAACATATTGTTCATATGAACAAGCTGAGGAAGGTTAAGATATGGTTCAAACATGTCGAAGGCAGCAACAATTACATCGCTGATCTTTCACGGGCCATTCAGGAATTCACCAAGGCTCCCATTGACAGGGATACTGACCGTTCTCTCTCACTTGATTCTGAAGAATGCCCTGAAAATTTCCTGAGTTCACTTGATTTGGAGACATGCTCTGAAGGTTCCAAATATGCTCTGAGGTCGCTAAAGTTAAATGGCGAACTTCACAAGTTGCCTCCATTTGTTAATTTGTTGTCAGGTCTCACTGAGCTTTGCATTTCATCACCTATGCTGACACAGGTTCATCTATCAACGCTGATCAATCTGAACAGACTGCTCTACCTCAAACTGGTTGCATATAAGCTCGAGAATTTCGAAATAAAACATGGAGCATTCCCGAGCTTGCGACGCCTGTGCTTTGTAGTGAAAAGTGTCACTTCAGCTCTGCCCACAATCAAGCATGGAGCTCTCCCAAATATCATATCACTTCAGCTGCTCTGTCAAGGTCCAGTTGGTCTTTCTGGCATCGAGATCAGACACATGAAACATCTCAAGGAAATCACAATTAACTCTGGAGTGGTTGTACAATGGGAACAGGCAGCAAAGAACCACCCAAATAGGCCTAAAGTTTTGTTCCTCAGAAAGGTTGATCCAATGGAAAGCGAGGAACGGGGAAGACCTTGTGCCATAAGGGAGCAGATGAAAATTACTGTAGCTCAACCAACTAGTTCAGGTGATGGACTGAACTCTAGCCTCAATAAGATCAGACTTTCAGAGCCTCCTTCTTCACGACTTGAGATGCCTGTTCGTCATATGGTGGATGGCCACTGAGGCAGCACCCCAGACTTCCTTGGCAAACCTCTAGCACAATATACCACTGCAGCTGGCAGACTTCAATGAAGACCATCCAAATTTTGCTAAAAAAACTTGGAAATCTAGATTGCTGTTCAGTTAAATGGTCCAGATTTCTGTATTTCCGTACTTGTCATGTTATGTGGTTAAGGTTGTAAATTGGCCCGGTTTTTTGTAAGTTCAGGGTGTTAAATAACCATATTTTAAATTCTTAAAATACAATGATCTGTGATTGGAGGTGTGCAATTGACCTCTTGCATAACTAAATCGATCCTGTTTGTAAAAAG More
CDS seq		ATGGAGTCCGCGGTGGCGAGCGCATTCTTGAAGGCCGTGATGGGGAGGCTGTTCATGGCGCTGGAGAAGGAGTACAGCAAGCACAAGGGCCTCGCGCAAGAAGCCCAGTCCCTCCAGCTCGACCTCCGCATGATCGCCGCCGTCATGGACGACCAGCTCCGCGCCATGGGGAGGGCGACGACGGCCGACGCCCGCACGGCCGTCGCGCGGCTCCACGCCGAGGAGATGCTCGACCTCGCGCACGACGTCGAGGAGTGCGTCGACCGCTTCCTGCACCGCCTCACCTGCAGGCAGCACCGCGGCGGCGCCGGCGCCGGAGCGTCGTCGTCGTCCTTGGTGCGGCGGATGGCGCACGAGCTCAGCAAGGTCCAGAGCCGGTCGAGCTTCGCCGACGAGATCCAGAGGCTCAAGACGCGCGTCAGGGAAGCGCAGCAGCGGATCATCCGCATGAAACCTACTTTGGATGTCCTCGCCGGCGGTGGCGGTGGCGGCGGCCAACTCACAGGCGCTGCCGGCACATCGTCGACGGCGCCGTCGTGCCGCGCGTCGCGCATCCCGGTGGGCATCGCGGAGCCCGTGGAGGAGCTCCTGTCGATGCTGGACGAGGTGGACGGCGAGCCGGAGCAGATGAGGGTCATCTCCGTCGTCGGATTCGGTGGCTCCGGGAAGACCACCCTCGTGAAGGCGGTCTACGATGATCCTCGCGCAAAGGACAGATTCTCCCGCCGCGCGTGGGTCACCGTCGGTAGCTCGCCGTCGCCGGAGACCAGCAATGGGATGAAGGGGATCCTGCGTGCTGTATTCCAGCAGGTTCTTCCCAAAGACGCCATGGATGCTGACGGACAACATCTTGAAACCTCGCTCAAAGAATACCTGAAGGACAAGAGGTATTTAATTATCATCGATGACATCGGGATGGATCAATGGAACATCATAAGATCGACCTTTGAAGACAATGGTACAAGCAGCAGGATAATACTGACCACAACCATCCAGTCTGTGGCAAATATGTGCAGCCATGGCAATGGCTATGTGTATCAAATGAACACACTTGGTGAAGAAGACTCTAAGGAACTCGCTTTTCCAGGGTTTAGATCACCTGAGTTGGAGCAAGGTTCAGCATCATTATTGGGGAAATGTGATGGTCTTCCTCTTGCTCTGGTCAGTGTCTCCGATTATCTGAAGAGCTCAAATGAGCCCACAGGAGAGCTGTGCGCAAAGCTGTGCCGCAACCTTGGTTCTCATCTGAAAGAGCAGGATGGCCATTACAGCTTTTCAGAACTCAGAAAGGTGCTCCTTGACAACTATGACAGTTTTTCTGGCTATCCTTTGAGCTGCTTGCTGTATCTTGGAATATTTCCAAACAATCGACCACTCAAGAAGAAAGTTGTAATCAGGCGGTGGTTAGCCGAAGGATATGCACGAACCGACTCTCTTCGTAGCGAAGAGGATATTGCTGATGAGAATTTCAGTAAGCTTATTGACCGGAATATCATTCAGCCTGTTGACACAAGAAACAATTCTGAAGTGAAAACCTGTAAAACTCATGGAATTATGCACGAGTTTTTGCTGAACAAGTCCTTGTCACAGATATTCATCGCGAAATCGTCTCATGATCATCCAAGACTAGGTGTCAATACTAATGCGTGCCACCTTTCTTTTCATTCTGGTGAACTGACAGAGTGTGTGGCATCTGATGAAGAGTTATCTCGTGTCCGGTCTCTGACAGTCTTTGGGCATGCAGGTGATGCAATTTGTTATGTTCGCAGGTGCAAACTGATACGAGTCTTGGATCTACAGGAATGCAGTGATTTGGATGACGGTCATCTGAAATACATATGCAAATTATGGCATCTGAAATACCTGAGCTTTGGGAGCAATATCAGTGAGCTTCCAAGGAGCATTGATGGACTGCATTGTTTAGAGACACTGGATTTAAGGAGGACCCAGATAAAGTTTTTGCCCATTGAAGCAATCATGCTGCCCCACTTAGCTCACCTGTTTGGAAAGTTTATGCTTCATGAAGATGATGTGAAGAGTGTGAACAAGATGAGTAAACTACAAAAATTCTTTTCTTCCAAAAAGAGCAATCTGCAAACTTTAGCAGGATTTATCACTGACGAAAGCAAAGGTTTTCTGCAACATATTGTTCATATGAACAAGCTGAGGAAGGTTAAGATATGGTTCAAACATGTCGAAGGCAGCAACAATTACATCGCTGATCTTTCACGGGCCATTCAGGAATTCACCAAGGCTCCCATTGACAGGGATACTGACCGTTCTCTCTCACTTGATTCTGAAGAATGCCCTGAAAATTTCCTGAGTTCACTTGATTTGGAGACATGCTCTGAAGGTTCCAAATATGCTCTGAGGTCGCTAAAGTTAAATGGCGAACTTCACAAGTTGCCTCCATTTGTTAATTTGTTGTCAGGTCTCACTGAGCTTTGCATTTCATCACCTATGCTGACACAGGTTCATCTATCAACGCTGATCAATCTGAACAGACTGCTCTACCTCAAACTGGTTGCATATAAGCTCGAGAATTTCGAAATAAAACATGGAGCATTCCCGAGCTTGCGACGCCTGTGCTTTGTAGTGAAAAGTGTCACTTCAGCTCTGCCCACAATCAAGCATGGAGCTCTCCCAAATATCATATCACTTCAGCTGCTCTGTCAAGGTCCAGTTGGTCTTTCTGGCATCGAGATCAGACACATGAAACATCTCAAGGAAATCACAATTAACTCTGGAGTGGTTGTACAATGGGAACAGGCAGCAAAGAACCACCCAAATAGGCCTAAAGTTTTGTTCCTCAGAAAGGTTGATCCAATGGAAAGCGAGGAACGGGGAAGACCTTGTGCCATAAGGGAGCAGATGAAAATTACTGTAGCTCAACCAACTAGTTCAGGTGATGGACTGAACTCTAGCCTCAATAAGATCAGACTTTCAGAGCCTCCTTCTTCACGACTTGAGATGCCTGTTCGTCATATGGTGGATGGCCACTGA More
Protein seq		MESAVASAFLKAVMGRLFMALEKEYSKHKGLAQEAQSLQLDLRMIAAVMDDQLRAMGRATTADARTAVARLHAEEMLDLAHDVEECVDRFLHRLTCRQHRGGAGAGASSSSLVRRMAHELSKVQSRSSFADEIQRLKTRVREAQQRIIRMKPTLDVLAGGGGGGGQLTGAAGTSSTAPSCRASRIPVGIAEPVEELLSMLDEVDGEPEQMRVISVVGFGGSGKTTLVKAVYDDPRAKDRFSRRAWVTVGSSPSPETSNGMKGILRAVFQQVLPKDAMDADGQHLETSLKEYLKDKRYLIIIDDIGMDQWNIIRSTFEDNGTSSRIILTTTIQSVANMCSHGNGYVYQMNTLGEEDSKELAFPGFRSPELEQGSASLLGKCDGLPLALVSVSDYLKSSNEPTGELCAKLCRNLGSHLKEQDGHYSFSELRKVLLDNYDSFSGYPLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARTDSLRSEEDIADENFSKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLSQIFIAKSSHDHPRLGVNTNACHLSFHSGELTECVASDEELSRVRSLTVFGHAGDAICYVRRCKLIRVLDLQECSDLDDGHLKYICKLWHLKYLSFGSNISELPRSIDGLHCLETLDLRRTQIKFLPIEAIMLPHLAHLFGKFMLHEDDVKSVNKMSKLQKFFSSKKSNLQTLAGFITDESKGFLQHIVHMNKLRKVKIWFKHVEGSNNYIADLSRAIQEFTKAPIDRDTDRSLSLDSEECPENFLSSLDLETCSEGSKYALRSLKLNGELHKLPPFVNLLSGLTELCISSPMLTQVHLSTLINLNRLLYLKLVAYKLENFEIKHGAFPSLRRLCFVVKSVTSALPTIKHGALPNIISLQLLCQGPVGLSGIEIRHMKHLKEITINSGVVVQWEQAAKNHPNRPKVLFLRKVDPMESEERGRPCAIREQMKITVAQPTSSGDGLNSSLNKIRLSEPPSSRLEMPVRHMVDGH
Function		Disease resistance protein RGA4 [UniProtKB/Swiss-Prot:F7J0M6]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_05G0374700	OsZS97_05T0374700.1	Chr05	24332477	24336136	+	makerRMon
CDS seq	ATGGAGTCCGCGGTGGCGAGCGCATTCTTGAAGGCCGTGATGGGGAGGCTGTTCATGGCGCTGGAGAAGGAGTACAGCAAGCACAAGGGCCTCGCGCAAGAAGCCCAGTCCCTCCAGCTCGACCTCCGCATGATCGCCGCCGTCATGGACGACCAGCTCCGCGCCATGGGGAGGGCGACGACGGCCGACGCCCGCACGGCCGTCGCGCGGCTCCACGCCGAGGAGATGCTCGACCTCGCGCACGACGTCGAGGAGTGCGTCGACCGCTTCCTGCACCGCCTCACCTGCAGGCAGCACCGCGGCGGCGCCGGCGCCGGAGCGTCGTCGTCGTCCTTGGTGCGGCGGATGGCGCACGAGCTCAGCAAGGTCCAGAGCCGGTCGAGCTTCGCCGACGAGATCCAGAGGCTCAAGACGCGCGTCAGGGAAGCGCAGCAGCGGATCATCCGCATGAAACCTACTTTGGATGTCCTCGCCGGCGGTGGCGGTGGCGGCGGCCAACTCACAGGCGCTGCCGGCACATCGTCGACGGCGCCGTCGTGCCGCGCGTCGCGCATCCCGGTGGGCATCGCGGAGCCCGTGGAGGAGCTCCTGTCGATGCTGGACGAGGTGGACGGCGAGCCGGAGCAGATGAGGGTCATCTCCGTCGTCGGATTCGGTGGCTCCGGGAAGACCACCCTCGTGAAGGCGGTCTACGATGATCCTCGCGCAAAGGACAGATTCTCCCGCCGCGCGTGGGTCACCGTCGGTAGCTCGCCGTCGCCGGAGACCAGCAATGGGATGAAGGGGATCCTGCGTGCTGTATTCCAGCAGGTTCTTCCCAAAGACGCCATGGATGCTGACGGACAACATCTTGAAACCTCGCTCAAAGAATACCTGAAGGACAAGAGGTATTTAATTATCATCGATGACATCGGGATGGATCAATGGAACATCATAAGATCGACCTTTGAAGACAATGGTACAAGCAGCAGGATAATACTGACCACAACCATCCAGTCTGTGGCAAATATGTGCAGCCATGGCAATGGCTATGTGTATCAAATGAACACACTTGGTGAAGAAGACTCTAAGGAACTCGCTTTTCCAGGGTTTAGATCACCTGAGTTGGAGCAAGGTTCAGCATCATTATTGGGGAAATGTGATGGTCTTCCTCTTGCTCTGGTCAGTGTCTCCGATTATCTGAAGAGCTCAAATGAGCCCACAGGAGAGCTGTGCGCAAAGCTGTGCCGCAACCTTGGTTCTCATCTGAAAGAGCAGGATGGCCATTACAGCTTTTCAGAACTCAGAAAGGTGCTCCTTGACAACTATGACAGTTTTTCTGGCTATCCTTTGAGCTGCTTGCTGTATCTTGGAATATTTCCAAACAATCGACCACTCAAGAAGAAAGTTGTAATCAGGCGGTGGTTAGCCGAAGGATATGCACGAACCGACTCTCTTCGTAGCGAAGAGGATATTGCTGATGAGAATTTCAGTAAGCTTATTGACCGGAATATCATTCAGCCTGTTGACACAAGAAACAATTCTGAAGTGAAAACCTGTAAAACTCATGGAATTATGCACGAGTTTTTGCTGAACAAGTCCTTGTCACAGATATTCATCGCGAAATCGTCTCATGATCATCCAAGACTAGGTGTCAATACTAATGCGTGCCACCTTTCTTTTCATTCTGGTGAACTGACAGAGTGTGTGGCATCTGATGAAGAGTTATCTCGTGTCCGGTCTCTGACAGTCTTTGGGCATGCAGGTGATGCAATTTGTTATGTTCGCAGGTGCAAACTGATACGAGTCTTGGATCTACAGGAATGCAGTGATTTGGATGACGGTCATCTGAAATACATATGCAAATTATGGCATCTGAAATACCTGAGCTTTGGGAGCAATATCAGTGAGCTTCCAAGGAGCATTGATGGACTGCATTGTTTAGAGACACTGGATTTAAGGAGGACCCAGATAAAGTTTTTGCCCATTGAAGCAATCATGCTGCCCCACTTAGCTCACCTGTTTGGAAAGTTTATGCTTCATGAAGATGATGTGAAGAGTGTGAACAAGATGAGTAAACTACAAAAATTCTTTTCTTCCAAAAAGAGCAATCTGCAAACTTTAGCAGGATTTATCACTGACGAAAGCAAAGGTTTTCTGCAACATATTGTTCATATGAACAAGCTGAGGAAGGTTAAGATATGGTTCAAACATGTCGAAGGCAGCAACAATTACATCGCTGATCTTTCACGGGCCATTCAGGAATTCACCAAGGCTCCCATTGACAGGGATACTGACCGTTCTCTCTCACTTGATTCTGAAGAATGCCCTGAAAATTTCCTGAGTTCACTTGATTTGGAGACATGCTCTGAAGGTTCCAAATATGCTCTGAGGTCGCTAAAGTTAAATGGCGAACTTCACAAGTTGCCTCCATTTGTTAATTTGTTGTCAGGTCTCACTGAGCTTTGCATTTCATCACCTATGCTGACACAGGTTCATCTATCAACGCTGATCAATCTGAACAGACTGCTCTACCTCAAACTGGTTGCATATAAGCTCGAGAATTTCGAAATAAAACATGGAGCATTCCCGAGCTTGCGACGCCTGTGCTTTGTAGTGAAAAGTGTCACTTCAGCTCTGCCCACAATCAAGCATGGAGCTCTCCCAAATATCATATCACTTCAGCTGCTCTGTCAAGGTCCAGTTGGTCTTTCTGGCATCGAGATCAGACACATGAAACATCTCAAGGAAATCACAATTAACTCTGGAGTGGTTGTACAATGGGAACAGGCAGCAAAGAACCACCCAAATAGGCCTAAAGTTTTGTTCCTCAGAAAGGTTGATCCAATGGAAAGCGAGGAACGGGGAAGACCTTGTGCCATAAGGGAGCAGATGAAAATTACTGTAGCTCAACCAACTAGTTCAGGTGATGGACTGAACTCTAGCCTCAATAAGATCAGACTTTCAGAGCCTCCTTCTTCACGACTTGAGATGCCTGTTCGTCATATGGTGGATGGCCACTGA More
Protein seq	MESAVASAFLKAVMGRLFMALEKEYSKHKGLAQEAQSLQLDLRMIAAVMDDQLRAMGRATTADARTAVARLHAEEMLDLAHDVEECVDRFLHRLTCRQHRGGAGAGASSSSLVRRMAHELSKVQSRSSFADEIQRLKTRVREAQQRIIRMKPTLDVLAGGGGGGGQLTGAAGTSSTAPSCRASRIPVGIAEPVEELLSMLDEVDGEPEQMRVISVVGFGGSGKTTLVKAVYDDPRAKDRFSRRAWVTVGSSPSPETSNGMKGILRAVFQQVLPKDAMDADGQHLETSLKEYLKDKRYLIIIDDIGMDQWNIIRSTFEDNGTSSRIILTTTIQSVANMCSHGNGYVYQMNTLGEEDSKELAFPGFRSPELEQGSASLLGKCDGLPLALVSVSDYLKSSNEPTGELCAKLCRNLGSHLKEQDGHYSFSELRKVLLDNYDSFSGYPLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARTDSLRSEEDIADENFSKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLSQIFIAKSSHDHPRLGVNTNACHLSFHSGELTECVASDEELSRVRSLTVFGHAGDAICYVRRCKLIRVLDLQECSDLDDGHLKYICKLWHLKYLSFGSNISELPRSIDGLHCLETLDLRRTQIKFLPIEAIMLPHLAHLFGKFMLHEDDVKSVNKMSKLQKFFSSKKSNLQTLAGFITDESKGFLQHIVHMNKLRKVKIWFKHVEGSNNYIADLSRAIQEFTKAPIDRDTDRSLSLDSEECPENFLSSLDLETCSEGSKYALRSLKLNGELHKLPPFVNLLSGLTELCISSPMLTQVHLSTLINLNRLLYLKLVAYKLENFEIKHGAFPSLRRLCFVVKSVTSALPTIKHGALPNIISLQLLCQGPVGLSGIEIRHMKHLKEITINSGVVVQWEQAAKNHPNRPKVLFLRKVDPMESEERGRPCAIREQMKITVAQPTSSGDGLNSSLNKIRLSEPPSSRLEMPVRHMVDGH More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.705091	3.158991	2.336311

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_05g0479800	RBH	0.151530	0.078023	0.185950
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os05g40160	RBH	0.100193	0.051310	0.046803
Nipponbare \| IRGSP 1.0 \| RAP-db	Os05g0479800	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_05g0021000	RBH	0.112611	0.777752	0.0
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_05g0020960	RBH	0.078285	0.655335	0.437120
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_05g0020850	RBH	0.000000	0.000000	0.000000
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_05g0020870	RBH	0.021729	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_05g0020940	RBH	0.318963	1.038193	1.032456
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_05G0364700	RBH	0.780732	4.7822895	0.351188
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_05g0020540	RBH	0.058961	0.048872	0.074098
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0563500	SBH	0.543096	17.170106	2.295448
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_05g0020780	RBH	0.032022	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_05g0020760	RBH	0.108917	1.840973	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_05g0020830	RBH	0.0	5.765326	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_05g0020900	RBH	0.0	0.0	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_05g0020920	RBH	0.0	0.860749	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_05G020360	RBH	0.130225	0.000000	0.108118
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_05g0020800	RBH	0.289608	0.000000	0.357944

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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