Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_05G0371900		OGI:05063670 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr05:24184578-24189122		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		CIPK28, OsCIPK28, OsSnRK3.18, SnRK3.18
DNA seq		TTAGTCAGTCATTTCCAACCTTTCTTTAGGACGGAACCTATCAATTAGTTTACATCTCCGGCGGTCCAGCCTATCAATTAGTTTAGTCATCTGATCATCTGGCTCTAGCAATTTGGCACAGACCTCTGTAATGATGTGATCATTTCTAGTAAAAGAAATGGGGAACCTCAGGCTCTAGTTCAAGAAAAAAAAAATCTGGTTCTAGCAATGTTGTGCAAGGAAATTTCTATGAAAACAACCTTCCTAATGCAAACCATGTACAGATCTCCGCAGAGTTATTGAAATTTCAAAGAAACGGGATGGCTGAACGAAATGACAGTTCTCCGTCTAGAAGGCTGCCCTTCGTAATATACTGGGCGTATGTGCACTGGTGCTATAGTTCTTTTACACCCAATTTGACACTCTACACGGAAGGATTCTCAGTTTTGCATTGAGAAATAAATACAGTACTAATTAAGTTAGCTTATAAATTATTTCATTCCTTCTGCACGCAATGCGTAAATCTGGATTCCTTTTAAATCAGGTGAGCTGAAGTGAAGGCCTCTACTATCATCACAACAGAAAAAGTGAGAGGTGTCCAGTTAGTAGCTGTAGAGTATGTGGACTTACCAATAGACCTCCTGGAGACACAATCTGCATTGTAAGCCTCGCCTTTGATTCCATTTTTGCTTGCATTCTTACTGCAGTTTCCGTGACCATGAGTCCATGACCAGGAAGTTCTACTAGTGGAATAAGTAACTGTGACCCTGTCCAGGAAATTCTACTAGTGGAATAAGAAGAGTGTTATTATGTTACCAACCACTATGCTGAGAAAAGGCCAACATGCCATTATCAAACTTGACATCGGTCAGATTTGCTGCTTCCGTTGAGATAGCCGTAATTTTCAATACAACTTCCTACTAGTAGTTGGCCATCTTGACCACACTTGATTAACACAAGTGGGGAGATTAAATGCACAATAGAACACCTAACCTTGATGCTTGGTAGCCTTGATTGCTTCTGTACTTCACCTTCACTACATTGGACCGTCAATTCATCATTTGGCAGCTCGATAGAGTTTCCTGACATAACAGACCAGCCGGCACATTTTGTATTGCTCAAAACTGCACAAAATATACAACACCTTCTGTACATGCCTCCCCCCTTCCCTTCGGGGGGGGGGGGGGGGGGATGGATAAGAAAGATGAAGATGCAATGTTACTCATTTATGTAAGAACTACAGATAAATTATTTAATCTATGGCCAATGTCAATAGGACAAAACGTGCCTTCGATTTTATTGACATTCCATGATTCTAGCTTGGTTTGTGATGGACATTGAGGGGAATAAAACAAAATATTCACAATTAGTCCTATTTTTTCTTTGTGGAGATGGTAAGTTGGTGATAGAGGTGCATGATGCAGCATGCTGTGACTACTGTTGATCACCTTGCCATGTCCAAATAATATCCTTGAGTGATGGCCTAATGTCCTCTTTCATCATCCTTTGATACTCCAATGTGTCACCATTAGTTTTCTTCAACTCAACTAAGAGAAAAGAAGGAGCAACCTCAGAAACCTCTGCATCAAGCTCAAGTCTGCCCTTCCTTCCTTCCTTCGTCGTAGCCAATTTAAGCACTCCATTGTCAGTTTTTGTAACTTTGAGATTCAAGGCTTTGGCTAGTTCCTTCAGCTTCACAAGTACAGCTGCAGCTGGCTTTCTGGATGTAAACCGTGACTCTCTTCGGCCATATCTTTCACCAAATAAACCTGATAGATCGAATCCAGTAGAGAGAGAAATGATGTCAAATGCATTCAAGTTGTATAGGTTTGGTGGCTCTTGATTTCTCTCAGAACTGATGCAGATTGTTGGGCCAGAGAAAGGAGCCTCACTTGTACAACTCTTCTTTCCTGTTTCGTTGTTCAATGCAGATATGGCGATGGGTTTCCTGTACCAAGCACTTCTCTTTATCCTTGAGATAGACATCCTAGTACTAGGATCAGGATCAAGGATTCCATAAAGGAGCTCCTTTAGCTCAGCTTAAAAATGACGAGGGCATCTATACTCAGCCTTTGCGATCTTCCTATACATTTGTATGATATTTCTATCATGGAAAGGAAGATAATTGGCCACAAGCACAAACAGAATCACTCCACAAGACCACACATCCGCCTTTGAGCCACTGTAGCCTTTCCTACTAAGCACTTCTGGAGCAACATAAGCTGGAGTTCCACATGTGGTGTGGAGAAGACCATCTTGTCTCCTTGATTCAGCTAACGCACTTAATCCAAAGTCAGAGACTTTAAGGGTTTCATTCTCATCCAGTAGTAAGTTTTCCGGCTTCAAGTCACGATGATAAACACCTCGGCTATGGCAATAGTCCATTGCAGAGATCAACTGTTGAAAATAATTTCTCGCAGACTCCTCATTGAGCTTTGCTCTGGCCATTTTGTGGAAAAGCTCGCCACCCTTAGCATACTCTAAAGCAAAGTAAATCTTGCTCTTGGTAGCCATTACCTCGAAGAGCTGGAGAACATTTGGATGCCTCACCAATCTCATTATCGAGATCTCCCTCTTTATCTGCTCCATGAGGCCAACCTTCAAGATCTTCTCCTTATCAATCATCTTTATCGCAACAGACTGACCAGAACTAAGATTACGAGCATAATAAACCTTTCCAAAGGTTCCTTGCCCCAATTGTCTCCCAATTACATACCGTTCCATCAACACACTCCTCTCTTCCATTATATCAGCACCGCGCTGAAATTAAAAATGGGTCTACTATCTATAGAGTGTTACTGACTGGCACATATCTCTGCATTTCCAGGTGAATCACTTTCAGTCTTCACCAAGATGCTACCTGCAAAATGAACAGGCCAAGAATGGAAGATTAGTCCAACATCTATAACGCAAATGGCTGCATCACAGGTATTATACGAACTGGGAACATCAAGAAGACATTTTTTTAGACGTTACAATTGTGGATCGATGGCATCCAATTCCAGAAGAATCCAATTTTCTCGCATCCGCGGAAAAATGCAATACATTTGATTTAAAATCACTAACGATACAATAGGAAGGGAAGAGGTTTCCCATAGATTCAGTACATGGGGTGTAGCTGCGATCAAATATCAGAACTGAAGCTTCACCGAACGAGACAGCAACAACTGCAATCTATGATGGCTAGAAACTCCTCTGACATAGGACGGAAAAAAGAACTGAAGAGAATATATCTGTGCTTGTGATAAAAATGGATGTCCAAATATTTGATGCGAGCAATTGAATCGCATCGGGACGCATATATTGTTTTTTGGCTCCTTCCAAGTAGCAGCGAAAAGCAATGCTTGATAGAAACACTGCAATAAACTGTTCTTTTGTCGACACATACGGCATGAAATTTAATGCTTATGCATAATTTTTTTTTCATATTGAGTATACCTTCCTTTGAGTTTGTTTTCTGTTCTGGTGGCACTTTGGCCGTGAGATTTTATGGGACACAACCCAAGGAGAAAAACCGTTAATCTCGCAACAGAAAAACTAAAGAGAAGTTCCCAATCAACAAGAACTCGAATCAAATCGAGTGAAGCCGGCAACAATCCAACAACAGATCCCTCAACGGAGACTAGCATGACAGATCACAATCGAATTAGACTCACCGACTCAGCTGCTGATCGAGGCAGATCCGAGGCTCCGAGCACCGGACTCCATTCGACTCGATCCGGCCGCGCGGCAAGCGGAGGGCGATGATTCTCTGCATCACGGTCGGGGAGGATATGCCCTCTTCTCACCCTGCATTACACGGTGGCTGGCCTGCTCGCCCTCGGCGAGGATGAGGGCTTCTGCTCCAAATTCGGCTGATCGGCTCCCTCCTCGTGCCAGTCGCCGCTCGTCGGCGTCGAGCGGGTCGCCGCGGCGATGTGGGGACGAACAGGCAGAGGCAGGGGCAGAGGCGTTTTTCCGGATTGGCCCCTCCACTTTTGGGTATTTCTGCATCTCGCCACATCATGTGTGGGATGGGATGCCGATGGGCTCCACTAGGCCCATCTAACAATCCAATCGAATAGGCCCACATAGAGAGGCCTTGTTCTTCAAGGCCCAACTCGACGTCTCCGTGTTTAGGCCCATTTAGCAGTCACACACAGCCACATGGCACACTGTGTCACTGTGTCTGGACGACCTCTCGATCCAGAGAGAGAGAAAAAAAAGGGCCAGGAACACTGCACAATCACACTGTTGGTGAATGCATAAATCAGGCATGGTACCATCAGGCCGTGACTATTCGTCTACACTGTTGATGGTTGGACGGGTCGGCGGCCGGCTGGTGCCACCGGGGTTAGGTCCATGAACAGGGAGCGCCACTGTGGGAGCGTGAGTTCCCCAGGTTTTTACCGCTTCGGGAGAGGTTTTTAACTCGGGCGGTGGTGAACTCCGCTGCGCAACACACGCGCTGCCCACTTCACAGGGCCAACCGTACGTGCGTGTGGTGCCAATTCGGCCTGCGTCCATGTGTATGAGCTCAGTAAAACTCACCAGCAACGCACCAAATGTCTGCAGATCAGCAGCCAT More
CDS seq		ATGGCTGCTGATCTGCAGACATTTGGTGCGTTGCTGAAATACCCAAAAGTGGAGGGGCCAATCCGGAAAAACGCCTCTGCCCCTGCCTCTGCCTGTTCGTCCCCACATCGCCGCGGCGACCCGCTCGACGCCGACGAGCGGCGACTGGCACGAGGAGGGAGCCGATCAGCCGAATTTGGAGCAGAAGCCCTCATCCTCGCCGAGGGCGAGCAGGCCAGCCACCGTGTAATGCAGGGTAGCATCTTGGTGAAGACTGAAAGTGATTCACCTGGAAATGCAGAGATATGTGCCAAGAGGAGTGTGTTGATGGAACGGTATGTAATTGGGAGACAATTGGGGCAAGGAACCTTTGGAAAGGTTTATTATGCTCGTAATCTTAGTTCTGGTCAGTCTGTTGCGATAAAGATGATTGATAAGGAGAAGATCTTGAAGGTTGGCCTCATGGAGCAGATAAAGAGGGAGATCTCGATAATGAGATTGGTGAGGCATCCAAATGTTCTCCAGCTCTTCGAGGTAATGGCTACCAAGAGCAAGATTTACTTTGCTTTAGAGTATGCTAAGGGTGGCGAGCTTTTCCACAAAATGGCCAGAGCAAAGCTCAATGAGGAGTCTGCGAGAAATTATTTTCAACAGTTGATCTCTGCAATGGACTATTGCCATAGCCGAGGTGTTTATCATCGTGACTTGAAGCCGGAAAACTTACTACTGGATGAGAATGAAACCCTTAAAGTCTCTGACTTTGGATTAAGTGCGTTAGCTGAATCAAGGAGACAAGATGGTCTTCTCCACACCACATGTGGAACTCCAGCTTATGTTGCTCCAGAAGTGCTTAGTAGGAAAGGCTACAGTGGCTCAAAGGCGGATGTGTGGTCTTGTGGAGTGATTCTGTTTGTGCTTGTGGCCAATTATCTTCCTTTCCATGATAGAAATATCATACAAATGTATAGGAAGATCGCAAAGGCTGAGTATAGATGCCCTCCTGAGCTAAAGGAGCTCCTTTATGGAATCCTTGATCCTGATCCTAGTACTAGGATGTCTATCTCAAGGATAAAGAGAAGTGCTTGGTACAGGAAACCCATCGCCATATCTGCATTGAACAACGAAACAGGAAAGAAGAGTTGTACAAGTGAGGCTCCTTTCTCTGGCCCAACAATCTGCATCAGTTCTGAGAGAAATCAAGAGCCACCAAACCTATACAACTTGAATGCATTTGACATCATTTCTCTCTCTACTGGATTCGATCTATCAGGTTTATTTGGTGAAAGATATGGCCGAAGAGAGTCACGGTTTACATCCAGAAAGCCAGCTGCAGCTGTACTTGTGAAGCTGAAGGAACTAGCCAAAGCCTTGAATCTCAAAGTTACAAAAACTGACAATGGAGTGCTTAAATTGGCTACGACGAAGGAAGGAAGGAAGGGCAGACTTGAGCTTGATGCAGAGGTTTCTGAGGTTGCTCCTTCTTTTCTCTTAGTTGAGTTGAAGAAAACTAATGGTGACACATTGGAGTATCAAAGGATGATGAAAGAGGACATTAGGCCATCACTCAAGGATATTATTTGGACATGGCAAGGAAACTCTATCGAGCTGCCAAATGATGAATTGACGGTCCAATGTAGTGAAGGTGAAGTACAGAAGCAATCAAGGCTACCAAGCATCAAGAATTTCCTGGACAGGGTCACAGTTACTTATTCCACTAGTAGAACTTCCTGGTCATGGACTCATGGTCACGGAAACTGCAGTAAGAATGCAAGCAAAAATGGAATCAAAGGCGAGGCTTACAATGCAGATTGTGTCTCCAGGAGGTCTATTGAGGTCTGTGCCAAATTGCTAGAGCCAGATGATCAGATGACTAAACTAATTGATAGGCTGGACCGCCGGAGATGTAAACTAATTGATAGGTTCCGTCCTAAAGAAAGGTTGGAAATGACTGACTAA More
Protein seq		MAADLQTFGALLKYPKVEGPIRKNASAPASACSSPHRRGDPLDADERRLARGGSRSAEFGAEALILAEGEQASHRVMQGSILVKTESDSPGNAEICAKRSVLMERYVIGRQLGQGTFGKVYYARNLSSGQSVAIKMIDKEKILKVGLMEQIKREISIMRLVRHPNVLQLFEVMATKSKIYFALEYAKGGELFHKMARAKLNEESARNYFQQLISAMDYCHSRGVYHRDLKPENLLLDENETLKVSDFGLSALAESRRQDGLLHTTCGTPAYVAPEVLSRKGYSGSKADVWSCGVILFVLVANYLPFHDRNIIQMYRKIAKAEYRCPPELKELLYGILDPDPSTRMSISRIKRSAWYRKPIAISALNNETGKKSCTSEAPFSGPTICISSERNQEPPNLYNLNAFDIISLSTGFDLSGLFGERYGRRESRFTSRKPAAAVLVKLKELAKALNLKVTKTDNGVLKLATTKEGRKGRLELDAEVSEVAPSFLLVELKKTNGDTLEYQRMMKEDIRPSLKDIIWTWQGNSIELPNDELTVQCSEGEVQKQSRLPSIKNFLDRVTVTYSTSRTSWSWTHGHGNCSKNASKNGIKGEAYNADCVSRRSIEVCAKLLEPDDQMTKLIDRLDRRRCKLIDRFRPKERLEMTD
Function		CBL-interacting protein kinase 28 [UniProtKB/Swiss-Prot:A3B529]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_05G0371900	OsZS97_05T0371900-mRNA-1	Chr05	24184578	24189122	-	makerRMon
CDS seq	ATGGCTGCTGATCTGCAGACATTTGGTGCGTTGCTGAAATACCCAAAAGTGGAGGGGCCAATCCGGAAAAACGCCTCTGCCCCTGCCTCTGCCTGTTCGTCCCCACATCGCCGCGGCGACCCGCTCGACGCCGACGAGCGGCGACTGGCACGAGGAGGGAGCCGATCAGCCGAATTTGGAGCAGAAGCCCTCATCCTCGCCGAGGGCGAGCAGGCCAGCCACCGTGTAATGCAGGGTAGCATCTTGGTGAAGACTGAAAGTGATTCACCTGGAAATGCAGAGATATGTGCCAAGAGGAGTGTGTTGATGGAACGGTATGTAATTGGGAGACAATTGGGGCAAGGAACCTTTGGAAAGGTTTATTATGCTCGTAATCTTAGTTCTGGTCAGTCTGTTGCGATAAAGATGATTGATAAGGAGAAGATCTTGAAGGTTGGCCTCATGGAGCAGATAAAGAGGGAGATCTCGATAATGAGATTGGTGAGGCATCCAAATGTTCTCCAGCTCTTCGAGGTAATGGCTACCAAGAGCAAGATTTACTTTGCTTTAGAGTATGCTAAGGGTGGCGAGCTTTTCCACAAAATGGCCAGAGCAAAGCTCAATGAGGAGTCTGCGAGAAATTATTTTCAACAGTTGATCTCTGCAATGGACTATTGCCATAGCCGAGGTGTTTATCATCGTGACTTGAAGCCGGAAAACTTACTACTGGATGAGAATGAAACCCTTAAAGTCTCTGACTTTGGATTAAGTGCGTTAGCTGAATCAAGGAGACAAGATGGTCTTCTCCACACCACATGTGGAACTCCAGCTTATGTTGCTCCAGAAGTGCTTAGTAGGAAAGGCTACAGTGGCTCAAAGGCGGATGTGTGGTCTTGTGGAGTGATTCTGTTTGTGCTTGTGGCCAATTATCTTCCTTTCCATGATAGAAATATCATACAAATGTATAGGAAGATCGCAAAGGCTGAGTATAGATGCCCTCCTGAGCTAAAGGAGCTCCTTTATGGAATCCTTGATCCTGATCCTAGTACTAGGATGTCTATCTCAAGGATAAAGAGAAGTGCTTGGTACAGGAAACCCATCGCCATATCTGCATTGAACAACGAAACAGGAAAGAAGAGTTGTACAAGTGAGGCTCCTTTCTCTGGCCCAACAATCTGCATCAGTTCTGAGAGAAATCAAGAGCCACCAAACCTATACAACTTGAATGCATTTGACATCATTTCTCTCTCTACTGGATTCGATCTATCAGGTTTATTTGGTGAAAGATATGGCCGAAGAGAGTCACGGTTTACATCCAGAAAGCCAGCTGCAGCTGTACTTGTGAAGCTGAAGGAACTAGCCAAAGCCTTGAATCTCAAAGTTACAAAAACTGACAATGGAGTGCTTAAATTGGCTACGACGAAGGAAGGAAGGAAGGGCAGACTTGAGCTTGATGCAGAGGTTTCTGAGGTTGCTCCTTCTTTTCTCTTAGTTGAGTTGAAGAAAACTAATGGTGACACATTGGAGTATCAAAGGATGATGAAAGAGGACATTAGGCCATCACTCAAGGATATTATTTGGACATGGCAAGGAAACTCTATCGAGCTGCCAAATGATGAATTGACGGTCCAATGTAGTGAAGGTGAAGTACAGAAGCAATCAAGGCTACCAAGCATCAAGAATTTCCTGGACAGGGTCACAGTTACTTATTCCACTAGTAGAACTTCCTGGTCATGGACTCATGGTCACGGAAACTGCAGTAAGAATGCAAGCAAAAATGGAATCAAAGGCGAGGCTTACAATGCAGATTGTGTCTCCAGGAGGTCTATTGAGGTCTGTGCCAAATTGCTAGAGCCAGATGATCAGATGACTAAACTAATTGATAGGCTGGACCGCCGGAGATGTAAACTAATTGATAGGTTCCGTCCTAAAGAAAGGTTGGAAATGACTGACTAA More
Protein seq	MAADLQTFGALLKYPKVEGPIRKNASAPASACSSPHRRGDPLDADERRLARGGSRSAEFGAEALILAEGEQASHRVMQGSILVKTESDSPGNAEICAKRSVLMERYVIGRQLGQGTFGKVYYARNLSSGQSVAIKMIDKEKILKVGLMEQIKREISIMRLVRHPNVLQLFEVMATKSKIYFALEYAKGGELFHKMARAKLNEESARNYFQQLISAMDYCHSRGVYHRDLKPENLLLDENETLKVSDFGLSALAESRRQDGLLHTTCGTPAYVAPEVLSRKGYSGSKADVWSCGVILFVLVANYLPFHDRNIIQMYRKIAKAEYRCPPELKELLYGILDPDPSTRMSISRIKRSAWYRKPIAISALNNETGKKSCTSEAPFSGPTICISSERNQEPPNLYNLNAFDIISLSTGFDLSGLFGERYGRRESRFTSRKPAAAVLVKLKELAKALNLKVTKTDNGVLKLATTKEGRKGRLELDAEVSEVAPSFLLVELKKTNGDTLEYQRMMKEDIRPSLKDIIWTWQGNSIELPNDELTVQCSEGEVQKQSRLPSIKNFLDRVTVTYSTSRTSWSWTHGHGNCSKNASKNGIKGEAYNADCVSRRSIEVCAKLLEPDDQMTKLIDRLDRRRCKLIDRFRPKERLEMTD More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_05G0371900	OsZS97_05T0371900-mRNA-2	Chr05	24184578	24187301	-	makerRMon
CDS seq	ATGGAAGAGAGGAGTGTGTTGATGGAACGGTATGTAATTGGGAGACAATTGGGGCAAGGAACCTTTGGAAAGGTTTATTATGCTCGTAATCTTAGTTCTGGTCAGTCTGTTGCGATAAAGATGATTGATAAGGAGAAGATCTTGAAGGTTGGCCTCATGGAGCAGATAAAGAGGGAGATCTCGATAATGAGATTGGTGAGGCATCCAAATGTTCTCCAGCTCTTCGAGGTAATGGCTACCAAGAGCAAGATTTACTTTGCTTTAGAGTATGCTAAGGGTGGCGAGCTTTTCCACAAAATGGCCAGAGCAAAGCTCAATGAGGAGTCTGCGAGAAATTATTTTCAACAGTTGATCTCTGCAATGGACTATTGCCATAGCCGAGGTGTTTATCATCGTGACTTGAAGCCGGAAAACTTACTACTGGATGAGAATGAAACCCTTAAAGTCTCTGACTTTGGATTAAGTGCGTTAGCTGAATCAAGGAGACAAGATGGTCTTCTCCACACCACATGTGGAACTCCAGCTTATGTTGCTCCAGAAGTGCTTAGTAGGAAAGGCTACAGTGGCTCAAAGGCGGATGTGTGGTCTTGTGGAGTGATTCTGTTTGTGCTTGTGGCCAATTATCTTCCTTTCCATGATAGAAATATCATACAAATGTATAGGAAGATCGCAAAGGCTGAGTATAGATGCCCTCCTGAGCTAAAGGAGCTCCTTTATGGAATCCTTGATCCTGATCCTAGTACTAGGATGTCTATCTCAAGGATAAAGAGAAGTGCTTGGTACAGGAAACCCATCGCCATATCTGCATTGAACAACGAAACAGGAAAGAAGAGTTGTACAAGTGAGGCTCCTTTCTCTGGCCCAACAATCTGCATCAGTTCTGAGAGAAATCAAGAGCCACCAAACCTATACAACTTGAATGCATTTGACATCATTTCTCTCTCTACTGGATTCGATCTATCAGGTTTATTTGGTGAAAGATATGGCCGAAGAGAGTCACGGTTTACATCCAGAAAGCCAGCTGCAGCTGTACTTGTGAAGCTGAAGGAACTAGCCAAAGCCTTGAATCTCAAAGTTACAAAAACTGACAATGGAGTGCTTAAATTGGCTACGACGAAGGAAGGAAGGAAGGGCAGACTTGAGCTTGATGCAGAGGTTTCTGAGGTTGCTCCTTCTTTTCTCTTAGTTGAGTTGAAGAAAACTAATGGTGACACATTGGAGTATCAAAGGATGATGAAAGAGGACATTAGGCCATCACTCAAGGATATTATTTGGACATGGCAAGTTTTGAGCAATACAAAATGTGCCGGCTGGTCTGTTATGTCAGGAAACTCTATCGAGCTGCCAAATGATGAATTGACGGTCCAATGTAGTGAAGGTGAAGTACAGAAGCAATCAAGGCTACCAAGCATCAAGAATTTCCTGGACAGGGTCACAGTTACTTATTCCACTAGTAGAACTTCCTGGTCATGGACTCATGGTCACGGAAACTGCAGTAAGAATGCAAGCAAAAATGGAATCAAAGGCGAGGCTTACAATGCAGATTGTGTCTCCAGGAGGTCTATTGAGGTCTGTGCCAAATTGCTAGAGCCAGATGATCAGATGACTAAACTAATTGATAGGCTGGACCGCCGGAGATGTAAACTAATTGATAGGTTCCGTCCTAAAGAAAGGTTGGAAATGACTGACTAA More
Protein seq	MEERSVLMERYVIGRQLGQGTFGKVYYARNLSSGQSVAIKMIDKEKILKVGLMEQIKREISIMRLVRHPNVLQLFEVMATKSKIYFALEYAKGGELFHKMARAKLNEESARNYFQQLISAMDYCHSRGVYHRDLKPENLLLDENETLKVSDFGLSALAESRRQDGLLHTTCGTPAYVAPEVLSRKGYSGSKADVWSCGVILFVLVANYLPFHDRNIIQMYRKIAKAEYRCPPELKELLYGILDPDPSTRMSISRIKRSAWYRKPIAISALNNETGKKSCTSEAPFSGPTICISSERNQEPPNLYNLNAFDIISLSTGFDLSGLFGERYGRRESRFTSRKPAAAVLVKLKELAKALNLKVTKTDNGVLKLATTKEGRKGRLELDAEVSEVAPSFLLVELKKTNGDTLEYQRMMKEDIRPSLKDIIWTWQVLSNTKCAGWSVMSGNSIELPNDELTVQCSEGEVQKQSRLPSIKNFLDRVTVTYSTSRTSWSWTHGHGNCSKNASKNGIKGEAYNADCVSRRSIEVCAKLLEPDDQMTKLIDRLDRRRCKLIDRFRPKERLEMTD More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_05G0371900	OsZS97_05T0371900-mRNA-3	Chr05	24185412	24188549	-	makerRMon
CDS seq	ATGCAGAAATACCCAAAAGTGGAGGGGCCAATCCGGAAAAACGCCTCTGCCCCTGCCTCTGCCTGTTCGTCCCCACATCGCCGCGGCGACCCGCTCGACGCCGACGAGCGGCGACTGGCACGAGGAGGGAGCCGATCAGCCGAATTTGGAGCAGAAGCCCTCATCCTCGCCGAGGGCGAGCAGGCCAGCCACCGTGTAATGCAGGGTAGCATCTTGGTGAAGACTGAAAGTGATTCACCTGGAAATGCAGAGATATGTGCCAGTCAGTAA More
Protein seq	MQKYPKVEGPIRKNASAPASACSSPHRRGDPLDADERRLARGGSRSAEFGAEALILAEGEQASHRVMQGSILVKTESDSPGNAEICASQ

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.6641375	0.1742025	7.8798765

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_05g0476350	RBH	0.0	0.0	0.000000
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os05g39870	RBH	0.0	0.0	0.042481
Nipponbare \| IRGSP 1.0 \| RAP-db	Os05g0476350	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_05g0020750	RBH	0.102634	0.0	0.685259
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_05g0020700	RBH	0.0	0.000000	0.994215
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_05g0020580	RBH	0.0	1.973487	0.0
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_05g0020580	RBH	0.0	0.063735	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_05g0020690	RBH	0.0	0.0	4.017854
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_05G0362400	RBH	0.6549855	0.4232455	1.235926
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_05g0020290	RBH	0.0	0.083947	0.266856
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0579000	RBH	7.469484	2.897213	13.8484005
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_05g0020530	RBH	0.0	0.085642	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_05g0020510	RBH	0.0	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_05g0020590	RBH	0.0	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_05g0020660	RBH	0.0	0.235746	0.449997
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_05g0020660	RBH	0.0	0.731366	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_05G020130	RBH	0.0	0.774556	1.062690
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_05g0020570	RBH	0.0	2.537872	1.335701

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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