Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_05G0287700 | OGI:05063370 | 1/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr05:18798453-18802597 | ||||||||
| Gene Symbol | OsPR2, Gns1, OsEGL1 | ||||||||||
| DNA seq | ATCAGAAGCTGATGGGGTAGACGTGCTGCATGTTGGGGTAGAAGAGGCCCCAATTCTGCTCGACGCCGGCGTCCTTCTGGTTCTCGTTGAACATGGAGAAGACGTAGGTCTCGATGGCGCCGGGGTGGCGCGGCGTGCCGCGGCCGACGTGGTTGATGAGGTTCTGGTTGTAGATCCGGGCGTTGGCCGGCGAGGCGGACATGCCGCCGGCGGAGGGCCAGCCGGTCTCGGAGACGACGAGGGAGACGCCGGAGCCGCCGTGCTTGGCCATGGCGGCGTAGAACGCGTCGACGGTGGTGTCGAACAGGTTCTGGTACCCGTAGGCGCCGTCCTGGACGACGGTGCCGGCGGCGGTGAAGAGCGCGTAGGAGACGTCGACGCTGCCCTGGCTGTAGGTGTAGGAGAAGTAGGGGTAGATGTTGGCGAGCAGCGGCGCGCCGGTGCGGGCGAGGAAGCTCAGGACGGGCGCCATGAACGCCTGCGACTCGCCGGTGAACTCCGCGGCGGACGGCGGGCTGTACACGGCGAGGAGCGCCTGCGACACCGACGTCGTCACCTTGATGTGGCCCAGCCCCGCCGACACCAGCGCGCCCCGGACGTTCTCCATGGCCGGGACCAGGCTGGACGTGGCGCCGCCGGCGACCTCGTTCCCGACGGCGACGTACCGGAACGACACCGACGGGTAGGCCTGGATGTTGTTCCGCACCCACGACGCCGCCGCGGCGGGGCTGGCGGCGAGGTTGGAGAGCACGTCGTTGGGCGCGCCGACGACGACGCTGATCCCCGTGCCGCCCACCGACTGCAGCGCCGCCTGGTCCGGCGCGTACAGCCGCATCGACGTGATGCCGTTGGAGCGGTACATCCCCACCACCGAGCTCGCCGGCGGCAGGTTGTTCGCGCTCATGCCGTAGCACACCCCGATCGCCTCCGCCTCTGCATCACCATCATATCACGTTAGTAAAATTTTTTATTACTTTAATTATTTACAGCAATTAATTAACTATTACTAAGCTTGTGGTTGCTTTATTTTTTTCGATGTTCATTTTAAGACTTGTTTATGTGCGTTTGTCTAGTACGGACTTATATAATACTCCGTAATTGGTTGTAACTCATTGAGTAAAGGCTGGGATTCTATTCTATTGTTAAAAAAATAACTAATTTATAGAGCTGTAAATAATTATGTTTTTATGTTTAGTTACTGTTAATGAACAGTGCATGGGTGTACATGTATTACTGTTTAATATTAATCTCGTTTTAAATCGGGAAATGGGTACACATAGCAAGAAAGGGCGGCCGGAGAGTAGTGTAGAAAAGTGACAGAATGCGATGCATGTACTACTATTGAAGAAGTACAAATACATACACATCCTTTTTTTGACTTATTATTTTTTCGATGAATAATAATTTAAATTTTAATCTTAATCTCAAGAAAAAGACATTTAACTGAAATTTGTATGCACGCTTGGACTAGCTTGATTTAATTTGCATATTTTTTTTGTGCTTCTCTCTCTTTCTCTAGACTCTACTACTGGCAGACAAAAATGGGATGTTTTTAGCTTTGTTTTACTGAAAAATATTATACTGATTAAGTTGGTGTCAAGTGCACGCACACTGACGAGGAATAATATATATTTGCTTCTTGCTTAGTTGCTTGAATGCTGCAGGTTTCCTGCTTCTCTAGCTTGACCTAGTTGTCACTCGTGACTAAAGACGTGTCTAAAGTGTGTAATAACTTTAACAAGTATGCTAATAAGCTAGCTCGTGACCAAGGATAACCTTAAACAACGGGATAAGCTTTTGACCCTAAGTGGATTAATCTCTTACTAGCTAGCAATCTCACTCTACTACCTAACCCTGAAAATTAGGTCTAATAGTTGAAAACTCTCCCCTGATCACGGCATCTAGCTATAGCTCTTGATGCAATTTTTTTTTGACTTTGGAAAGCTATCAAGTGTTTATCCTACAACAAATAGCATGTACTTGCACGCCACTTGTCAGCTAATTTCGGAGATGGACAAGGAATATACTACCCAAGAAACATAGAGAAATTGAGAGAGAAAAAATGAGATAGAGAAATTGAAAGAGAGAGAGAGAGAGAGAGAGATGGAGATGTAATGGTTTGGTCCAACGTCAGCAGCATGACCGTTGGATAGTCCACGTAAGGTCGATGTGGCCAAAGGGGAAGCTAGCTAGCTAACTAACAAAGCAGCATCTAATAAGCTTTAGCTGAAGCTTAGTTTAGACCACCCGTGTGCTAATAGTCAGTGAGTGCAGTGGAGTAATATGCAACTACTCAAGAAACGTACATGTCCAATTAAATGAAGCACACCCCTACAACTTACTAATTGCTCCAATTTGTCAGGTCACAACATGCTTTAGGACAACATAAGCAACACCTGTCCTAACTAATTAATTTCTGACTACTGGTGATCATGGATGTGCCATGTGTTTACTACTACTCTCTTTACAGTTTAGTTGCACTATATGTGTCAATATTTGTGTTAGAACAAGACTAATAGCTATAATATGTAGTACACTATTTAGTAGTATATATCCATCATTAGATATTGTTAGTGAGTGAGTGAGTTAGTTACTAGCTAGTACAACATGCATATATCTTACTTAAAGAATGGAACAGTGTTGGTACAAGATATGGGAGTTTGTGTCAACCTGGAGGACCATTGGACTGGGCAGGTACAATATCATGCATCATTTGAAAAATGTCAAGCGATAGATATATATATATCTAGAGAGAGAAAACTAAAGACGACAGATAATGAGATATGGTGTGGTGTTGGGTTAGGGGGTGGTTAAGCAGTTGTTGCAACCGAATCAATAAGGGAACAAACGAAGCGGTAGGGATCAAGAGAGAGATAGAAAAGCTTATATTTGTGAGAGAGATAGCACTTGATAAATTGAATTAACTTTCATGAATGTCAAAAACAAAAAGGCTATCTCCAGTAGCTGAATTCTTAGCCTAACATGACTACTGATGAGAGATAGAAAGAAAGAAAGATATAAAGCTAGGTTATGTGTTGAAACATTCTAAAGTTCCAAAAGATGCAAGCAACTGTGAGATGACATGCATGCATGCACCAAACATGCAAAGACTTCATCTGCAAGATTGTTAGTTAATTTGTGTACGAAATGTGCCTCTAAAAGCTAGCTGCTAGCTAGCTAGAAACATCCCTTTCGGCATGCTCCCAAGATACTATGCTTGCTTGCAGAAATTAATTACTACTCGCAGTAATTTTTCTTGTTAATTAAACTGCAGTCAATTATACTATATTCTTCAGACATATATATATGCACTTTTGTTTTGGTGAGGTGCCACCACTCAAAAAGGATAGATATATCTTTGAGAGAACGACTCTCGATAAGCAAAAATTCAGAGAGGTGAGTCATCAGAGAAGATCAGTCAAAATTGAGGTTTCCTGATCTTTTAACGAAAGTGATTGATGCGAGGTTTTTACTGGTCCCATAGACGAAGACGACGATGCGTGTGAGTGATGGGCAGAATGAGACGGCACGAGACGAGCTTAATTAACCTTCTTTCAGCAGCAGCAGCAGCAGCAGCAATTAAGCAGCAGAAGAGAATAATTAAACTCGCAGTGAGAGCGACAGGCACCGAAACTGCAGGGGGAGGCGTTTAACGAGATGACTCGCTAACGAGAGTTGTTATCTCTCTTTTCTGCATGACGTTGTTGATGAAAATTGATGTATATCTATGTGACTCTTGACCACTGTGTGTATTATTTGTTAGCTAGCTATCTCTATTTAGCTAGCCCATTTCTACCAATTATAATCTCTTCATCTTTCTCTGTCTCCCAAGAAATTAATCATTAACTTTTTGCAATCTATCCACACACCATGCATGACGTGCGTAAACAAAACCTTTTTTTGGTAATAGAATAAAATTAAACCCCAGACTCTGCATCGTGAGCGAGTGCATGAACTAAACTAAAACTTATATATACCTAATGATTTTCCAAACATGCAACAAATCGAAAAAAAAACACAAGAGAGAGATAGAGAGAGAAAAAGAAAAGGAAAGAGAGGGAAAGGTAATCACTTTGAGGAATGGAGGCAAAGGCACCGAGGAGCAATGCGAGAGCGAACATGGAGGCTACACCTTGGCTAGCCAT
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| CDS seq | ATGGCTAGCCAAGGTGTAGCCTCCATGTTCGCTCTCGCATTGCTCCTCGGTGCCTTTGCCTCCATTCCTCAAAAGGCGGAGGCGATCGGGGTGTGCTACGGCATGAGCGCGAACAACCTGCCGCCGGCGAGCTCGGTGGTGGGGATGTACCGCTCCAACGGCATCACGTCGATGCGGCTGTACGCGCCGGACCAGGCGGCGCTGCAGTCGGTGGGCGGCACGGGGATCAGCGTCGTCGTCGGCGCGCCCAACGACGTGCTCTCCAACCTCGCCGCCAGCCCCGCCGCGGCGGCGTCGTGGGTGCGGAACAACATCCAGGCCTACCCGTCGGTGTCGTTCCGGTACGTCGCCCCTGGTCCCGGCCATGGAGAACGTCCGGGGCGCGCTGGTGTCGGCGGGGCTGGGCCACATCAAGGTGACGACGTCGGTGTCGCAGGCGCTCCTCGCCGTGTACAGCCCGCCGTCCGCCGCGGAGTTCACCGGCGAGTCGCAGGCGTTCATGGCGCCCGTCCTGAGCTTCCTCGCCCGCACCGGCGCGCCGCTGCTCGCCAACATCTACCCCTACTTCTCCTACACCTACAGCCAGGGCAGCGTCGACGTCTCCTACGCGCTCTTCACCGCCGCCGGCACCGTCGTCCAGGACGGCGCCTACGGGTACCAGAACCTGTTCGACACCACCGTCGACGCGTTCTACGCCGCCATGGCCAAGCACGGCGGCTCCGGCGTCTCCCTCGTCGTCTCCGAGACCGGCTGGCCCTCCGCCGGCGGCATGTCCGCCTCGCCGGCCAACGCCCGGATCTACAACCAGAACCTCATCAACCACGTCGGCCGCGGCACGCCGCGCCACCCCGGCGCCATCGAGACCTACGTCTTCTCCATGTTCAACGAGAACCAGAAGGACGCCGGCGTCGAGCAGAATTGGGGCCTCTTCTACCCCAACATGCAGCACGTCTACCCCATCAGCTTCTGAT
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| Protein seq | MASQGVASMFALALLLGAFASIPQKAEAIGVCYGMSANNLPPASSVVGMYRSNGITSMRLYAPDQAALQSVGGTGISVVVGAPNDVLSNLAASPAAAASWVRNNIQAYPSVSFRYVAPGPGHGERPGRAGVGGAGPHQGDDVGVAGAPRRVQPAVRRGVHRRVAGVHGARPELPRPHRRAAARQHLPLLLLHLQPGQRRRLLRALHRRRHRRPGRRLRVPEPVRHHRRRVLRRHGQARRLRRLPRRLRDRLALRRRHVRLAGQRPDLQPEPHQPRRPRHAAPPRRHRDLRLLHVQREPEGRRRRAELGPLLPQHAARLPHQLL |
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| Function | Lichenase-2 (Fragment) [UniProtKB/Swiss-Prot:P12257] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_05G0287700 | OsZS97_05T0287700.1 | Chr05 | 18798453 | 18802597 | - | makerRMon | ||
| CDS seq | ATGGCTAGCCAAGGTGTAGCCTCCATGTTCGCTCTCGCATTGCTCCTCGGTGCCTTTGCCTCCATTCCTCAAAAGGCGGAGGCGATCGGGGTGTGCTACGGCATGAGCGCGAACAACCTGCCGCCGGCGAGCTCGGTGGTGGGGATGTACCGCTCCAACGGCATCACGTCGATGCGGCTGTACGCGCCGGACCAGGCGGCGCTGCAGTCGGTGGGCGGCACGGGGATCAGCGTCGTCGTCGGCGCGCCCAACGACGTGCTCTCCAACCTCGCCGCCAGCCCCGCCGCGGCGGCGTCGTGGGTGCGGAACAACATCCAGGCCTACCCGTCGGTGTCGTTCCGGTACGTCGCCCCTGGTCCCGGCCATGGAGAACGTCCGGGGCGCGCTGGTGTCGGCGGGGCTGGGCCACATCAAGGTGACGACGTCGGTGTCGCAGGCGCTCCTCGCCGTGTACAGCCCGCCGTCCGCCGCGGAGTTCACCGGCGAGTCGCAGGCGTTCATGGCGCCCGTCCTGAGCTTCCTCGCCCGCACCGGCGCGCCGCTGCTCGCCAACATCTACCCCTACTTCTCCTACACCTACAGCCAGGGCAGCGTCGACGTCTCCTACGCGCTCTTCACCGCCGCCGGCACCGTCGTCCAGGACGGCGCCTACGGGTACCAGAACCTGTTCGACACCACCGTCGACGCGTTCTACGCCGCCATGGCCAAGCACGGCGGCTCCGGCGTCTCCCTCGTCGTCTCCGAGACCGGCTGGCCCTCCGCCGGCGGCATGTCCGCCTCGCCGGCCAACGCCCGGATCTACAACCAGAACCTCATCAACCACGTCGGCCGCGGCACGCCGCGCCACCCCGGCGCCATCGAGACCTACGTCTTCTCCATGTTCAACGAGAACCAGAAGGACGCCGGCGTCGAGCAGAATTGGGGCCTCTTCTACCCCAACATGCAGCACGTCTACCCCATCAGCTTCTGAT
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| Protein seq | MASQGVASMFALALLLGAFASIPQKAEAIGVCYGMSANNLPPASSVVGMYRSNGITSMRLYAPDQAALQSVGGTGISVVVGAPNDVLSNLAASPAAAASWVRNNIQAYPSVSFRYVAPGPGHGERPGRAGVGGAGPHQGDDVGVAGAPRRVQPAVRRGVHRRVAGVHGARPELPRPHRRAAARQHLPLLLLHLQPGQRRRLLRALHRRRHRRPGRRLRVPEPVRHHRRRVLRRHGQARRLRRLPRRLRDRLALRRRHVRLAGQRPDLQPEPHQPRRPRHAAPPRRHRDLRLLHVQREPEGRRRRAELGPLLPQHAARLPHQLL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 58.263321 | 134.0028 | 0.151417 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0375400 | SBH | 0.529882 | 0.467992 | 2.021434 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g31140 | SBH | 0.329774 | 0.289676 | 0.549551 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0375400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0014890 | SBH | 0.201582 | 99.760727 | 10.138625 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0014890 | SBH | 2.532385 | 6.477068 | 1.925786 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0014730 | SBH | 0.262070 | 43.967777 | 8.630351 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0014760 | SBH | 0.328859 | 1.455300 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0014910 | SBH | 1.223034 | 48.610905 | 18.930841 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0276800 | SBH | 19.8554095 | 89.589981 | 0.775554 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0014530 | SBH | 0.343081 | 4.319223 | 4.227051 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0682200 | SBH | 2.5094515 | 7.211031 | 0.0078575 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0014680 | SBH | 0.150737 | 1.606134 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0014720 | SBH | 0.700851 | 43.910549 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0014740 | SBH | 0.000000 | 118.787178 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0014800 | SBH | 3.810600 | 15.866119 | 5.279232 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0014830 | SBH | 5.153269 | 78.077599 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G014450 | SBH | 0.104418 | 1.854024 | 1.226060 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0014710 | SBH | 0.000000 | 141.130203 | 13.130313 |
