Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_05G0259100		OGI:05044280 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr05:17129787-17133104		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		TGTGATGCTACCACACAACTTTACTTTTGTTGATACTCGTTGAACTTGTATATGATTTGGTTTCAGATATTATGTGCAGGATGAATGTTATGCAGAAGCTGTACAGCTCAGGTAGATTGGTTTGTGAAACTACACAAGGTTTTACATTTCAATCTCGTTAAACACCTCACAAGAATCTGCACGCACACTACATATGAAATCCCCTCATTGTTCATGTCATATTTACAGATGGATGCAAAGTAGGTTCATTTCAAGAGCAAAGTTACAAATACTGGCACGCTGGTCAGGCTGCCTCGGTGGAGATGATCTCGAGCTCGGCCCACCAGAGCGGCGACACCTTGGGGGTGGCGGCGTCGGGCGGCATGGCGGTGATCTCCCTGAGCCGGGCCGCGACGTCGGCCATGGAGGGGCGCCGCCTCGGGTCGCGGTCGGCGCAGGACCGGACGACGGCGTCCAGGCGGTCGACGGTCTCGGCGTGGAAGGCGCCCCGCAGCGCCGGGTCCATGACGTCCCGCAGCCGCCGCTCCCCGCGGAGGAGCGCCGCCGCCCACCCCTGCACCAGCCCGCCCTCCGACGCCGCGAGCCGCCCCGCCATCATCTCCAGCAGCAGCATCCCGTACCCGTGCACCACGCTCTCCCTGTCCGCCATCGCCGGCGCCGCCGCCGCCGCCGCCATCTCCTCCTCGCAGAAGCCCACGTCGGAGATCTTGGCGGCGAAGTCGTCGGTGAGGTAGACGGTGGAGGCGTCCAGCGTCCGGACGATCTCCGGCGGGGCGAGCTGGTGCATGTGCTCCAGGCAGTAGGCGACGCCGACCGCCACGCGCAGCCGCGTCGGCCAGTCCAGGTGCCCCTCGTCCCTCGCTGCATTTCCCACCGTCAATGTCAGCTGCCATTTTTCGTGCTTGCTACAGGTCGGGGTGAAGTAGGTAGAAATCCTAAGTTCCAAAGAAAATTACCGTGGAGATGCTCGAATAGTGTGCCGTTTGGGGCGTACTCGAACACCATCATCCTCGTGAACGGCTGCTCCTCCTCGCAGTAGCCAAGAAGGTTCACAAAGTTCTTGTGGTTCACCCTCGACAGGCTCGTTATCTGGAACAACCCCCCAACACAAATGACACAATGTTAGGCACCGTTATCTCGTAAACTTTTTCACAGGAATCAGTGAATCAGTTCAATTTCATAGGGACCTAGGGAAAAAAATAATCAAGTATTGCATTATTGGTAGTTAAAATTAAAATAATATCAAGGGAACGTATCTTACACACACTAAAGATTCTAGATATGATTTGTGCATGTACTCTAATTGACAATTATTTACTCTGGTTTTTAATACATAACGTCATTGACCATTGGCCTTATTTAGCTTTTTTTTTGCAAATATTTAAATTACATTTAATGATAAACCAAACAATAATAATAGTAATATTTACAAAGGGAGGCAGTAGTAATACCTTCTTTCTGAAGTGTGCCTCGCACTTCTTGGACCAGTCCTTGGGCGACGTCTTGGTGGTGGAGACGACGGCGATCTCGACGCCGCTGGAGAGCGTCCCCTTGTACATGGTGTACTCCGGCAGCGAGCCGATGACGTTGCTGAAGTCCTCGCACGCCGCCTCCAGCTCCGCCCTCCTCAGCGCCGGCACCCCCGTCACGAACGCCCTCTGCAGCTGCCCGCTCAGCCCCGTCGCCCACGGCCGCACGCTCCTCACCACCTTGCTCGACCGGTAGCACGCCGCGAACGCCGCCGCCGACGCCGCAAGAAGCACCGACGCCCCCGCCGCCGCCACAAGAACGTAGTTCGTCTTTCCGCCGCCGCCGCCGCGCCTCGTTGCGCTCCCGTCCGTCACCTCCGGTCGGCTGGTTTCGCCGGCGTCGCCGGAGCTAGACGCCGGCGGCAACGCGATGCTGCGGGGGCGCGCGTGTTCCTCACCGCGCCGCGGCGGGGCCGCGTGCTCGGCGACCGCGGCCGACGACGCTGGCGAAGGCGCAGGGGAAGGCGAAGGCGAGGGCGAGCTCGACGGGCCCTGGACCGGCGGCATGTCGAGCCATGGCGGCCAGTCCTTGAGCGGCGGCGGCGGCGGCAGCAGCATCGGGAGTCCGAACGGGTTCGACGGCGTCGACGACGTCGACGGCCATCCGGCCTTGCTGCCGGCGTGCCTGCTCCGCTGCTGCTGCTGCTGCGAAGATGATGATGACTTCTTGGCATGGATCAACCTGCGAATGATTGAGCAGAGATGAGGCTAAAGTTGACGAGCAATTGGACAAGAACATGCGTGCAGCCCGGATGGGGTCGAATGGTTGGTTGTTCAGCTGTCCATCTCTGACAGCCACGACAACATTCCTAGCACAAATTTTTTTCCTACCATTCTATATCTATTTTGATTTCTATGGAAAAATGTCTTTGTGATGAACATTCACGGATAATTCAGGCAAATTTGGCCTATGCTTGTTCAAATGCAGGGGAAACTTGTGATGGAAGAGAAGAAGAAATTATGCCCAAGCTGCAACCTAATTATAACACTGTGAATTATTATTTCCTTAAAGGAAACTCTATTATTGCGGTTTTTTGAAAATAAACTTTATTACTACTGCCTATAAATTAAGAGTCTCTGAATTTTGTCAAAATTTAGACTGAAATTCAGGGCATGTACGAACATGAAAGTGAGCCAAGAAAACATCAATCGTTCTCACCGAGCTGCAGGGCGCACGCCTTCATTCCAATTCGCCGTTCCATCAACACCACATCATAACAATGATTTCAAAACATACACAAATCAGCTAAACAGAAACCAGAACATTCTTGGACAAGCTGATCATCTGAACAAACAAAAACAAAAATACAACACACACCTCGCCGAGCACCATGGCCGCCGCCGCCGCCGCCGCTGATCCCAAGCTGAAGCTGCAAGCAGAGCAGCAGCAGCACAGCCACCGCCACCCTGCTCATCCTCTCCATGAAGAGCAGGACGGTCTTAAGAAGGGAAAGAGAGAGAAGCCTGCAGCAATGGCGATGATGATGGAGCTCTTGCAGAGGAGGCAGGGAAAGCAATGCAAGAGAGATAAGCTTAAGCCAAGCTAAGCTAGGCAGCAGCAAGAAGCAGAGGCGAGAAGATGATTTGGGCGTGACCACTGCGGCGAGCTAGCGAGAGCCACGCCGCCCACGGCACGCGGCGACAATAAATTCTTGTGCTTGGCTCGATTTGGATTTTTTCGACCTAACTAGTGCTACTATTGCTTAGGAGTATGCATGTACTATGCCCACTTCATCCAGTGGTTGGGGTTCTTGCGATAGGTGAGAGGTCACAGGAGGATACATGATAG More
CDS seq		ATGGAGAGGATGAGCAGGGTGGCGGTGGCTGTGCTGCTGCTGCTCTGCTTGCAGCTTCAGCTTGGGATCAGCGGCGGCGGCGGCGGCGGCCATGGTGCTCGGCGAGGCGTGCGCCCTGCAGCTCGGTTGATCCATGCCAAGAAGTCATCATCATCTTCGCAGCAGCAGCAGCAGCGGAGCAGGCACGCCGGCAGCAAGGCCGGATGGCCGTCGACGTCGTCGACGCCGTCGAACCCGTTCGGACTCCCGATGCTGCTGCCGCCGCCGCCGCCGCTCAAGGACTGGCCGCCATGGCTCGACATGCCGCCGGTCCAGGGCCCGTCGAGCTCGCCCTCGCCTTCGCCTTCCCCTGCGCCTTCGCCAGCGTCGTCGGCCGCGGTCGCCGAGCACGCGGCCCCGCCGCGGCGCGGTGAGGAACACGCGCGCCCCCGCAGCATCGCGTTGCCGCCGGCGTCTAGCTCCGGCGACGCCGGCGAAACCAGCCGACCGGAGGTGACGGACGGGAGCGCAACGAGGCGCGGCGGCGGCGGCGGAAAGACGAACTACGTTCTTGTGGCGGCGGCGGGGGCGTCGGTGCTTCTTGCGGCGTCGGCGGCGGCGTTCGCGGCGTGCTACCGGTCGAGCAAGGTGGTGAGGAGCGTGCGGCCGTGGGCGACGGGGCTGAGCGGGCAGCTGCAGAGGGCGTTCGTGACGGGGGTGCCGGCGCTGAGGAGGGCGGAGCTGGAGGCGGCGTGCGAGGACTTCAGCAACGTCATCGGCTCGCTGCCGGAGTACACCATGTACAAGGGGACGCTCTCCAGCGGCGTCGAGATCGCCGTCGTCTCCACCACCAAGACGTCGCCCAAGGACTGGTCCAAGAAGTGCGAGGCACACTTCAGAAAGAAGATAACGAGCCTGTCGAGGGTGAACCACAAGAACTTTGTGAACCTTCTTGGCTACTGCGAGGAGGAGCAGCCGTTCACGAGGATGATGGTGTTCGAGTACGCCCCAAACGGCACACTATTCGAGCATCTCCACGCGAGGGACGAGGGGCACCTGGACTGGCCGACGCGGCTGCGCGTGGCGGTCGGCGTCGCCTACTGCCTGGAGCACATGCACCAGCTCGCCCCGCCGGAGATCGTCCGGACGCTGGACGCCTCCACCGTCTACCTCACCGACGACTTCGCCGCCAAGATCTCCGACGTGGGCTTCTGCGAGGAGGAGATGGCGGCGGCGGCGGCGGCGCCGGCGATGGCGGACAGGGAGAGCGTGGTGCACGGGTACGGGATGCTGCTGCTGGAGATGATGGCGGGGCGGCTCGCGGCGTCGGAGGGCGGGCTGGTGCAGGGGTGGGCGGCGGCGCTCCTCCGCGGGGAGCGGCGGCTGCGGGACGTCATGGACCCGGCGCTGCGGGGCGCCTTCCACGCCGAGACCGTCGACCGCCTGGACGCCGTCGTCCGGTCCTGCGCCGACCGCGACCCGAGGCGGCGCCCCTCCATGGCCGACGTCGCGGCCCGGCTCAGGGAGATCACCGCCATGCCGCCCGACGCCGCCACCCCCAAGGTGTCGCCGCTCTGGTGGGCCGAGCTCGAGATCATCTCCACCGAGGCAGCCTGA More
Protein seq		MERMSRVAVAVLLLLCLQLQLGISGGGGGGHGARRGVRPAARLIHAKKSSSSSQQQQQRSRHAGSKAGWPSTSSTPSNPFGLPMLLPPPPPLKDWPPWLDMPPVQGPSSSPSPSPSPAPSPASSAAVAEHAAPPRRGEEHARPRSIALPPASSSGDAGETSRPEVTDGSATRRGGGGGKTNYVLVAAAGASVLLAASAAAFAACYRSSKVVRSVRPWATGLSGQLQRAFVTGVPALRRAELEAACEDFSNVIGSLPEYTMYKGTLSSGVEIAVVSTTKTSPKDWSKKCEAHFRKKITSLSRVNHKNFVNLLGYCEEEQPFTRMMVFEYAPNGTLFEHLHARDEGHLDWPTRLRVAVGVAYCLEHMHQLAPPEIVRTLDASTVYLTDDFAAKISDVGFCEEEMAAAAAAPAMADRESVVHGYGMLLLEMMAGRLAASEGGLVQGWAAALLRGERRLRDVMDPALRGAFHAETVDRLDAVVRSCADRDPRRRPSMADVAARLREITAMPPDAATPKVSPLWWAELEIISTEAA
Function		Inactive receptor-like serine/threonine-protein kinase At2g40270 [UniProtKB/Swiss-Prot:Q9SIZ4]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_05G0259100	OsZS97_05T0259100.1	Chr05	17129787	17133104	-	makerRMon
CDS seq	ATGGAGAGGATGAGCAGGGTGGCGGTGGCTGTGCTGCTGCTGCTCTGCTTGCAGCTTCAGCTTGGGATCAGCGGCGGCGGCGGCGGCGGCCATGGTGCTCGGCGAGGCGTGCGCCCTGCAGCTCGGTTGATCCATGCCAAGAAGTCATCATCATCTTCGCAGCAGCAGCAGCAGCGGAGCAGGCACGCCGGCAGCAAGGCCGGATGGCCGTCGACGTCGTCGACGCCGTCGAACCCGTTCGGACTCCCGATGCTGCTGCCGCCGCCGCCGCCGCTCAAGGACTGGCCGCCATGGCTCGACATGCCGCCGGTCCAGGGCCCGTCGAGCTCGCCCTCGCCTTCGCCTTCCCCTGCGCCTTCGCCAGCGTCGTCGGCCGCGGTCGCCGAGCACGCGGCCCCGCCGCGGCGCGGTGAGGAACACGCGCGCCCCCGCAGCATCGCGTTGCCGCCGGCGTCTAGCTCCGGCGACGCCGGCGAAACCAGCCGACCGGAGGTGACGGACGGGAGCGCAACGAGGCGCGGCGGCGGCGGCGGAAAGACGAACTACGTTCTTGTGGCGGCGGCGGGGGCGTCGGTGCTTCTTGCGGCGTCGGCGGCGGCGTTCGCGGCGTGCTACCGGTCGAGCAAGGTGGTGAGGAGCGTGCGGCCGTGGGCGACGGGGCTGAGCGGGCAGCTGCAGAGGGCGTTCGTGACGGGGGTGCCGGCGCTGAGGAGGGCGGAGCTGGAGGCGGCGTGCGAGGACTTCAGCAACGTCATCGGCTCGCTGCCGGAGTACACCATGTACAAGGGGACGCTCTCCAGCGGCGTCGAGATCGCCGTCGTCTCCACCACCAAGACGTCGCCCAAGGACTGGTCCAAGAAGTGCGAGGCACACTTCAGAAAGAAGATAACGAGCCTGTCGAGGGTGAACCACAAGAACTTTGTGAACCTTCTTGGCTACTGCGAGGAGGAGCAGCCGTTCACGAGGATGATGGTGTTCGAGTACGCCCCAAACGGCACACTATTCGAGCATCTCCACGCGAGGGACGAGGGGCACCTGGACTGGCCGACGCGGCTGCGCGTGGCGGTCGGCGTCGCCTACTGCCTGGAGCACATGCACCAGCTCGCCCCGCCGGAGATCGTCCGGACGCTGGACGCCTCCACCGTCTACCTCACCGACGACTTCGCCGCCAAGATCTCCGACGTGGGCTTCTGCGAGGAGGAGATGGCGGCGGCGGCGGCGGCGCCGGCGATGGCGGACAGGGAGAGCGTGGTGCACGGGTACGGGATGCTGCTGCTGGAGATGATGGCGGGGCGGCTCGCGGCGTCGGAGGGCGGGCTGGTGCAGGGGTGGGCGGCGGCGCTCCTCCGCGGGGAGCGGCGGCTGCGGGACGTCATGGACCCGGCGCTGCGGGGCGCCTTCCACGCCGAGACCGTCGACCGCCTGGACGCCGTCGTCCGGTCCTGCGCCGACCGCGACCCGAGGCGGCGCCCCTCCATGGCCGACGTCGCGGCCCGGCTCAGGGAGATCACCGCCATGCCGCCCGACGCCGCCACCCCCAAGGTGTCGCCGCTCTGGTGGGCCGAGCTCGAGATCATCTCCACCGAGGCAGCCTGA More
Protein seq	MERMSRVAVAVLLLLCLQLQLGISGGGGGGHGARRGVRPAARLIHAKKSSSSSQQQQQRSRHAGSKAGWPSTSSTPSNPFGLPMLLPPPPPLKDWPPWLDMPPVQGPSSSPSPSPSPAPSPASSAAVAEHAAPPRRGEEHARPRSIALPPASSSGDAGETSRPEVTDGSATRRGGGGGKTNYVLVAAAGASVLLAASAAAFAACYRSSKVVRSVRPWATGLSGQLQRAFVTGVPALRRAELEAACEDFSNVIGSLPEYTMYKGTLSSGVEIAVVSTTKTSPKDWSKKCEAHFRKKITSLSRVNHKNFVNLLGYCEEEQPFTRMMVFEYAPNGTLFEHLHARDEGHLDWPTRLRVAVGVAYCLEHMHQLAPPEIVRTLDASTVYLTDDFAAKISDVGFCEEEMAAAAAAPAMADRESVVHGYGMLLLEMMAGRLAASEGGLVQGWAAALLRGERRLRDVMDPALRGAFHAETVDRLDAVVRSCADRDPRRRPSMADVAARLREITAMPPDAATPKVSPLWWAELEIISTEAA More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_05G0259100	OsZS97_05T0259100.2	Chr05	17129787	17133104	-	makerRMon
CDS seq	ATGTTTTCTTGGCTCACTTTCATGTTGATCCATGCCAAGAAGTCATCATCATCTTCGCAGCAGCAGCAGCAGCGGAGCAGGCACGCCGGCAGCAAGGCCGGATGGCCGTCGACGTCGTCGACGCCGTCGAACCCGTTCGGACTCCCGATGCTGCTGCCGCCGCCGCCGCCGCTCAAGGACTGGCCGCCATGGCTCGACATGCCGCCGGTCCAGGGCCCGTCGAGCTCGCCCTCGCCTTCGCCTTCCCCTGCGCCTTCGCCAGCGTCGTCGGCCGCGGTCGCCGAGCACGCGGCCCCGCCGCGGCGCGGTGAGGAACACGCGCGCCCCCGCAGCATCGCGTTGCCGCCGGCGTCTAGCTCCGGCGACGCCGGCGAAACCAGCCGACCGGAGGTGACGGACGGGAGCGCAACGAGGCGCGGCGGCGGCGGCGGAAAGACGAACTACGTTCTTGTGGCGGCGGCGGGGGCGTCGGTGCTTCTTGCGGCGTCGGCGGCGGCGTTCGCGGCGTGCTACCGGTCGAGCAAGGTGGTGAGGAGCGTGCGGCCGTGGGCGACGGGGCTGAGCGGGCAGCTGCAGAGGGCGTTCGTGACGGGGGTGCCGGCGCTGAGGAGGGCGGAGCTGGAGGCGGCGTGCGAGGACTTCAGCAACGTCATCGGCTCGCTGCCGGAGTACACCATGTACAAGGGGACGCTCTCCAGCGGCGTCGAGATCGCCGTCGTCTCCACCACCAAGACGTCGCCCAAGGACTGGTCCAAGAAGTGCGAGGCACACTTCAGAAAGAAGATAACGAGCCTGTCGAGGGTGAACCACAAGAACTTTGTGAACCTTCTTGGCTACTGCGAGGAGGAGCAGCCGTTCACGAGGATGATGGTGTTCGAGTACGCCCCAAACGGCACACTATTCGAGCATCTCCACGCGAGGGACGAGGGGCACCTGGACTGGCCGACGCGGCTGCGCGTGGCGGTCGGCGTCGCCTACTGCCTGGAGCACATGCACCAGCTCGCCCCGCCGGAGATCGTCCGGACGCTGGACGCCTCCACCGTCTACCTCACCGACGACTTCGCCGCCAAGATCTCCGACGTGGGCTTCTGCGAGGAGGAGATGGCGGCGGCGGCGGCGGCGCCGGCGATGGCGGACAGGGAGAGCGTGGTGCACGGGTACGGGATGCTGCTGCTGGAGATGATGGCGGGGCGGCTCGCGGCGTCGGAGGGCGGGCTGGTGCAGGGGTGGGCGGCGGCGCTCCTCCGCGGGGAGCGGCGGCTGCGGGACGTCATGGACCCGGCGCTGCGGGGCGCCTTCCACGCCGAGACCGTCGACCGCCTGGACGCCGTCGTCCGGTCCTGCGCCGACCGCGACCCGAGGCGGCGCCCCTCCATGGCCGACGTCGCGGCCCGGCTCAGGGAGATCACCGCCATGCCGCCCGACGCCGCCACCCCCAAGGTGTCGCCGCTCTGGTGGGCCGAGCTCGAGATCATCTCCACCGAGGCAGCCTGA More
Protein seq	MFSWLTFMLIHAKKSSSSSQQQQQRSRHAGSKAGWPSTSSTPSNPFGLPMLLPPPPPLKDWPPWLDMPPVQGPSSSPSPSPSPAPSPASSAAVAEHAAPPRRGEEHARPRSIALPPASSSGDAGETSRPEVTDGSATRRGGGGGKTNYVLVAAAGASVLLAASAAAFAACYRSSKVVRSVRPWATGLSGQLQRAFVTGVPALRRAELEAACEDFSNVIGSLPEYTMYKGTLSSGVEIAVVSTTKTSPKDWSKKCEAHFRKKITSLSRVNHKNFVNLLGYCEEEQPFTRMMVFEYAPNGTLFEHLHARDEGHLDWPTRLRVAVGVAYCLEHMHQLAPPEIVRTLDASTVYLTDDFAAKISDVGFCEEEMAAAAAAPAMADRESVVHGYGMLLLEMMAGRLAASEGGLVQGWAAALLRGERRLRDVMDPALRGAFHAETVDRLDAVVRSCADRDPRRRPSMADVAARLREITAMPPDAATPKVSPLWWAELEIISTEAA More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_05G0259100	OsZS97_05T0259100.3	Chr05	17129787	17132633	-	makerRMon
CDS seq	ATGCTGCTGCCGCCGCCGCCGCCGCTCAAGGACTGGCCGCCATGGCTCGACATGCCGCCGGTCCAGGGCCCGTCGAGCTCGCCCTCGCCTTCGCCTTCCCCTGCGCCTTCGCCAGCGTCGTCGGCCGCGGTCGCCGAGCACGCGGCCCCGCCGCGGCGCGGTGAGGAACACGCGCGCCCCCGCAGCATCGCGTTGCCGCCGGCGTCTAGCTCCGGCGACGCCGGCGAAACCAGCCGACCGGAGGTGACGGACGGGAGCGCAACGAGGCGCGGCGGCGGCGGCGGAAAGACGAACTACGTTCTTGTGGCGGCGGCGGGGGCGTCGGTGCTTCTTGCGGCGTCGGCGGCGGCGTTCGCGGCGTGCTACCGGTCGAGCAAGGTGGTGAGGAGCGTGCGGCCGTGGGCGACGGGGCTGAGCGGGCAGCTGCAGAGGGCGTTCGTGACGGGGGTGCCGGCGCTGAGGAGGGCGGAGCTGGAGGCGGCGTGCGAGGACTTCAGCAACGTCATCGGCTCGCTGCCGGAGTACACCATGTACAAGGGGACGCTCTCCAGCGGCGTCGAGATCGCCGTCGTCTCCACCACCAAGACGTCGCCCAAGGACTGGTCCAAGAAGTGCGAGGCACACTTCAGAAAGAAGATAACGAGCCTGTCGAGGGTGAACCACAAGAACTTTGTGAACCTTCTTGGCTACTGCGAGGAGGAGCAGCCGTTCACGAGGATGATGGTGTTCGAGTACGCCCCAAACGGCACACTATTCGAGCATCTCCACGCGAGGGACGAGGGGCACCTGGACTGGCCGACGCGGCTGCGCGTGGCGGTCGGCGTCGCCTACTGCCTGGAGCACATGCACCAGCTCGCCCCGCCGGAGATCGTCCGGACGCTGGACGCCTCCACCGTCTACCTCACCGACGACTTCGCCGCCAAGATCTCCGACGTGGGCTTCTGCGAGGAGGAGATGGCGGCGGCGGCGGCGGCGCCGGCGATGGCGGACAGGGAGAGCGTGGTGCACGGGTACGGGATGCTGCTGCTGGAGATGATGGCGGGGCGGCTCGCGGCGTCGGAGGGCGGGCTGGTGCAGGGGTGGGCGGCGGCGCTCCTCCGCGGGGAGCGGCGGCTGCGGGACGTCATGGACCCGGCGCTGCGGGGCGCCTTCCACGCCGAGACCGTCGACCGCCTGGACGCCGTCGTCCGGTCCTGCGCCGACCGCGACCCGAGGCGGCGCCCCTCCATGGCCGACGTCGCGGCCCGGCTCAGGGAGATCACCGCCATGCCGCCCGACGCCGCCACCCCCAAGGTGTCGCCGCTCTGGTGGGCCGAGCTCGAGATCATCTCCACCGAGGCAGCCTGA More
Protein seq	MLLPPPPPLKDWPPWLDMPPVQGPSSSPSPSPSPAPSPASSAAVAEHAAPPRRGEEHARPRSIALPPASSSGDAGETSRPEVTDGSATRRGGGGGKTNYVLVAAAGASVLLAASAAAFAACYRSSKVVRSVRPWATGLSGQLQRAFVTGVPALRRAELEAACEDFSNVIGSLPEYTMYKGTLSSGVEIAVVSTTKTSPKDWSKKCEAHFRKKITSLSRVNHKNFVNLLGYCEEEQPFTRMMVFEYAPNGTLFEHLHARDEGHLDWPTRLRVAVGVAYCLEHMHQLAPPEIVRTLDASTVYLTDDFAAKISDVGFCEEEMAAAAAAPAMADRESVVHGYGMLLLEMMAGRLAASEGGLVQGWAAALLRGERRLRDVMDPALRGAFHAETVDRLDAVVRSCADRDPRRRPSMADVAARLREITAMPPDAATPKVSPLWWAELEIISTEAA More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_05G0259100	OsZS97_05T0259100.4	Chr05	17129787	17132624	-	makerRMon
CDS seq	ATGCTGCTGCCGCCGCCGCCGCCGCTCAAGGACTGGCCGCCATGGCTCGACATGCCGCCGGTCCAGGGCCCGTCGAGCTCGCCCTCGCCTTCGCCTTCCCCTGCGCCTTCGCCAGCGTCGTCGGCCGCGGTCGCCGAGCACGCGGCCCCGCCGCGGCGCGGTGAGGAACACGCGCGCCCCCGCAGCATCGCGTTGCCGCCGGCGTCTAGCTCCGGCGACGCCGGCGAAACCAGCCGACCGGAGGTGACGGACGGGAGCGCAACGAGGCGCGGCGGCGGCGGCGGAAAGACGAACTACGTTCTTGTGGCGGCGGCGGGGGCGTCGGTGCTTCTTGCGGCGTCGGCGGCGGCGTTCGCGGCGTGCTACCGGTCGAGCAAGGTGGTGAGGAGCGTGCGGCCGTGGGCGACGGGGCTGAGCGGGCAGCTGCAGAGGGCGTTCGTGACGGGGGTGCCGGCGCTGAGGAGGGCGGAGCTGGAGGCGGCGTGCGAGGACTTCAGCAACGTCATCGGCTCGCTGCCGGAGTACACCATGTACAAGGGGACGCTCTCCAGCGGCGTCGAGATCGCCGTCGTCTCCACCACCAAGACGTCGCCCAAGGACTGGTCCAAGAAGTGCGAGGCACACTTCAGAAAGAAGATAACGAGCCTGTCGAGGGTGAACCACAAGAACTTTGTGAACCTTCTTGGCTACTGCGAGGAGGAGCAGCCGTTCACGAGGATGATGGTGTTCGAGTACGCCCCAAACGGCACACTATTCGAGCATCTCCACGCGAGGGACGAGGGGCACCTGGACTGGCCGACGCGGCTGCGCGTGGCGGTCGGCGTCGCCTACTGCCTGGAGCACATGCACCAGCTCGCCCCGCCGGAGATCGTCCGGACGCTGGACGCCTCCACCGTCTACCTCACCGACGACTTCGCCGCCAAGATCTCCGACGTGGGCTTCTGCGAGGAGGAGATGGCGGCGGCGGCGGCGGCGCCGGCGATGGCGGACAGGGAGAGCGTGGTGCACGGGTACGGGATGCTGCTGCTGGAGATGATGGCGGGGCGGCTCGCGGCGTCGGAGGGCGGGCTGGTGCAGGGGTGGGCGGCGGCGCTCCTCCGCGGGGAGCGGCGGCTGCGGGACGTCATGGACCCGGCGCTGCGGGGCGCCTTCCACGCCGAGACCGTCGACCGCCTGGACGCCGTCGTCCGGTCCTGCGCCGACCGCGACCCGAGGCGGCGCCCCTCCATGGCCGACGTCGCGGCCCGGCTCAGGGAGATCACCGCCATGCCGCCCGACGCCGCCACCCCCAAGGTGTCGCCGCTCTGGTGGGCCGAGCTCGAGATCATCTCCACCGAGGCAGCCTGA More
Protein seq	MLLPPPPPLKDWPPWLDMPPVQGPSSSPSPSPSPAPSPASSAAVAEHAAPPRRGEEHARPRSIALPPASSSGDAGETSRPEVTDGSATRRGGGGGKTNYVLVAAAGASVLLAASAAAFAACYRSSKVVRSVRPWATGLSGQLQRAFVTGVPALRRAELEAACEDFSNVIGSLPEYTMYKGTLSSGVEIAVVSTTKTSPKDWSKKCEAHFRKKITSLSRVNHKNFVNLLGYCEEEQPFTRMMVFEYAPNGTLFEHLHARDEGHLDWPTRLRVAVGVAYCLEHMHQLAPPEIVRTLDASTVYLTDDFAAKISDVGFCEEEMAAAAAAPAMADRESVVHGYGMLLLEMMAGRLAASEGGLVQGWAAALLRGERRLRDVMDPALRGAFHAETVDRLDAVVRSCADRDPRRRPSMADVAARLREITAMPPDAATPKVSPLWWAELEIISTEAA More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	13.4948515	1.333623	3.4666655

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_05g0353500	RBH	0.0	0.129555	1.163349
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os05g28520	RBH	0.0	0.073861	0.330283
Nipponbare \| IRGSP 1.0 \| RAP-db	Os05g0353500	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_05g0013450	RBH	0.094579	0.000000	2.834298
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_05g0013490	RBH	0.066253	0.547271	0.588963
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_05g0013320	RBH	0.0	0.0	2.506713
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_05g0013350	RBH	0.0	0.000000	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_05g0013470	RBH	0.0	0.0	3.158707
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_05G0251100	RBH	12.942829	4.605337	6.6834845
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_05g0013060	RBH	0.000000	0.258764	0.568101
Zhenshan 97 \| ZS97RS3 \| HZAU	NA	NA	NA	NA	NA
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_05g0013280	RBH	0.000000	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_05g0013240	RBH	0.0	0.000000	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_05g0013280	RBH	0.0	0.0	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_05g0013380	RBH	0.012734	0.076520	0.835752
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_05g0013330	RBH	0.000000	1.715598	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_05G013070	RBH	0.000000	0.0	1.336709
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_05g0013280	RBH	0.000000	0.000000	0.968832

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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