Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsZS97_04G0480700 | OGI:04089550 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr04:31882215-31888809 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | CTTCTCTCGGCGCTCGTCTATGCTGTATGCACCACCGAGAAGGAGAACAGCAAGCAAAGGCGCGACGACATGCCGTGTAGAAGAGCAAGCACACCGGCCGCTGCAGCTGCAGCTGATCCTGCTGTGGCTGCATGGCCTCTCACCCCACTGGTGCTGGCGCTCGCCGTCTTCTCGGCGATGCCTCACGTCACGCTCTCCCGGGGACGGGAGAATCCGTGGCCGCCTCTAGAGGGAAACTCGCAGCTGACGACGACGAAGAACCTGTCGTGCGACGAAGTCCCTTATCCCTTCGGCTTAAAAGGCAAATCTGCCCCTGGCTTCAGGGTAACATGCCGGAAAAACGACAGTGCTGCCATGCTCCGCATTGGCCATCAAAAATTTCGAATCGATCAGGTGTCTTCGCAGGAAGGTTTCGTCGTCATATTTGCAGGCCCCATCTACCGGTTGTGCTACGATCGCAACGGCCGGCCGGTCGTGGGGAGCACCGGAATCGGGCCGACGAATTTGACGGACACGCCGTTCTTCTTCTCCAAGCGCAACACGCTCGTCGCCACCGGCTGTTACTCCAACTTTACTGCTACCTTCACCAGCTCGCTACACCATCATGGTTGGTCTACTAACGGAAGCTGCACAACCAACGGCAGCGTAAACTCTGACGGATTGTGCCCCGGGACGGCCTGCTGCGACGCCTACGGCATGCCGTTGGACGACGCGCAGGAGGTCACCTTCGAGTTCAACAAGACATCGGCGAGCGTGGCCGGCACCTGCAGCGCAGCCTTCATCCTCTACCAAGAAGAGCAGATCTTCAAAGTCAGCGGTAACAGCAAGCCAATGCATCTCCACCAAGAAGAGCACATCTTCAGAGTCGGCGGCGGTGACAGCAAGCCAGTGCATCTGGAAGACGTTCTGGTGCCTTTGGGTGAGCGAAGGATGGTCTTGGACTGGGTGATTGGGCGCGCCACCTGTAAGCAAGCCCGGAACAACAGCTTCAAGACACAGTACCGCTGCAACAACGAGAGCTCATGCATGGACAGGTTCGTGGGAGAGGGCTACGTGTGCAGATGCAAAGCAGGGTACGACCAATACAACGGGAATCCATACGAGGCAGGCGGCTGCCAAGGTAAATAGTAGATACTTCTAAACACAGTGATCTAAAAAATATGCACTAGCTAGTGAAAACAGTTTGTTATAGTTTCTTTCTGTTTGTATCATGGCAGAATTCAATTACCATAGAACTTAACTAACTGCTATGAATAGAACTGTATTTTTCTGCTTTCTCAATGTGGCTTCACACTATTTATGAAGATATCAACGAATGCCGGTCTCTCATTTACAACAACTGTAGCGTACTCTGTCATAACACTCCCGGAGGATATACTTGCTCTTGCCCCAATAATAAGACTGGTGATGGCTACAGGACAGGGACAGGGTGCATTGACTCCCATCGGCCACCTGGTAAATACATGCCATATATTTTTTCCGACTGCTTTTATTTAAGATAATGGGATATTTTTTTAGATTGCATATAATCCTACTTATTCTAGAATTTCTGTTCAAACAACCATATTAATCACCACGTGTTATTTCTAGACCAATTTCGAGATAAGTTGGAAAACTCAAAAAAAAAAAAAGCTTTTAAACGGTTCTTCCTGGGTACTTTTATGTTTGATTGGATGAGAAAAGATGAAAGGTCTAAATTGATTCTACTACCAATAAATACCACAGTAAGAATTATGTTCCTTTTAACGTGACTATGCATGAACTTAGGGATTGCCTGGGTGATAGGAGCTTTGTTCCCTTTTTACTTAAAGAAATGTCAATATGAATTGATATATTTCTTCCGGTTGAAACGCTAAAATGATATTGTATGCATCTCCTATATATGGCTGGATTACGCTGTAATATTTCTTCTCTAAAAAAATTCTGCAATAGTTACTCGTAATAATGCGTGATGATCTGACCAAGATCATATATTCTCTCTCTCATGCAGGCGCCCCTAGTCACAACCAACCGCAAGGTATCATAAAACAAAGTGCAGTTTGTTCACCACACAGAAGAGCATTTTAAGTGCCGTCTTTCTAATCAGGAAATTATTATTCGTTCAATGTACCGGAGAACGTTCGAAATCTTGTTTACAACATCTAATAATGAACCAGTAGCGGCCTAATCATTTTTCATTTGGAAAACATCTACTAATTGCATGCAGTTTACTATTATTAGGCCTAGATGTGTGCAGAGAAAAGAACCCTTGCACGTACTCAAAATCCTGCAAGGATGAGCAAGGAGTTACTTCGTGTGTTTGCCCGAAAGGCATGATCGGCGATGGCCAGAAGAATGGGAGTGGCTGCAAAAAGCAGTTTCCTTTATATACCGCTTTGGGTAAATATGCTCAACACCCGGCATTCCACATCAGATCATTCATTTTCTCTCTTTTATTTTTAATTCCTCTGCTATTAATACAGTTGACAAAAATATCTCCCGTGCAGAACTGCTAATCTACAGTATATAGCCGCTGATGATTACGTCATTACTAACATGAACTAGCTGGTTGGCCCGCGCAATTGCGCGGCTAGCACCCATACAAAATTATATATATTTTTAATATGACTTTACTTAAAATTTATTAATTAGTTATCTCGTTATCTTAAGATTTTGAAATACCAAACCTTACCATCCTTGTAATTCTAATTTTATAGTTTTAAAAAGTTACACCAGCTACTACCCCTTACTTCTGTCGTATCCTTATTTATTTGCTTGCTCGGTCTACTACTGTTTCTATTCATTCTTCTTGGAACCTTTAAAATTTTGATCTTATAGTTTTTAGAGTTTATTGTCCTATTTGGTTTCGTTTTTATAATTTCTAGAAGTCCCGTCAAATACTACCATTATACTTCTCTATGGTCGTCCACTGCCTCTTCTCTTTTCATTGATATTTTAAAAATCGAACATAATTATCGTTTAGGTTTATTTTTTTTACTTTTTAGAAGTTCCGCTAAAACGTCAGCGACTTTGTCACTATACTCCTCTGCGACTCACCTGCTGCCTCCCTTTGTTATTATCATTGAGATTTTAAAATAAAAATGATTATCGTTGGTGTTTATCTTTTCACTTTTTAGAAGCTCGAATCTTTAAAAATTGGACATTATAGTTTTTAGAGTTTATTGTCTCGTTGGGTTTCATTTTATATAATTTGAGAAATCCCGTCAAACGCTGGCACTATACTCCTCTATGACCCATCCGCCGCCTACTCTTTATTGTCATTAGGATTGTCAAAGTTGAACATAACTTTCGTTGGAATTCATTTTTTACTTTCTAGAAGTCCCACCAACCATCGACGGCGCTGCCATTGTACTCCTATACGATCTGCCCGTTGCCTCTAATTTTTATTGTCATTGAGATTTTAAAAATCAAATATGATTATCATTGGTTTTTCTTTTACTTTCTAAAAGTCCCGGCAACCGCCTTGACCGATTGTTTCACGACCTGCCCATCGTCCTTCCTTTTAATCGTCTTTAGTATTCTATTTGGTGTTTTATTAATAGTTTTTAGATGTCCCATCAACCGCCACCACTCTACTCCTTTATAAGCCTATTACTTAATTAATCTCGTCATGTATTTTAGATGGTCTTTTCTTTTAATAGTCTTTATTTTTTACACCAATTTTAGTTATATATAAATTGTATTCCTAGTTGAAATCTTATTTTCCTTTTTCTAATTTCAGATTTTATTTACTTATTTTTCGAATTTTAACTACTATCGTTTGGGTTCTTTTAATTTTTTATTTTTGTTTTCAATTTCAGTTTTTCAAAATTGTATTCCTACTTGAACTCTCTTTTTAATTTGTCTAATTTTGGATTTTATTTTATTCTAAATTTTAATTAATCTCGTATTGGGTTCTTATATGTACTTTTATTTCAATATTGCTTGTACTTAATTCCGAATTTCAGTTAATTTTAAATTGTATTATTACTTGAACTCTTCTTTTCTGTTTTTTTTTCCTAATTTTGATTTGTTTTATTTTTTATTCCGAATTTTAATAATCTTGTATTGGGTTTTATATGGACTCTTCTTTCAATATTGCTTAATTTTAATTCCGAATTTTAGTTATTTTTAAATTGTATTTCTACTCGAATCTTCTTTTTCCTTTTTTTTTTGCTAATTTTGGATTTTATTTTATTTTATTATTCTGAATATTAATTAATCTCGTATTAGGTTCTTATAAGGACTCTTCTTTCAATAGTGCTTTTTTTAAATTTCGAATTTCAGTTATTTTTAAATTATATTTCTACTTGGACTGTCCTTTTCTTTTTCTTCGATTATTTTTTTCCCAGTAATATGTCGTGTAGGTGTTGATATCAAGATGAATTAATGCACGTGGCTTTAGCGGGACGGCAAGATTATTTGGGCTAAGTGAACTTGAGTCCAGATGGACTCTTCCATGGACTGTGCATCTGTTTTTTTTTCCTTTTATTCCACACCCAATCGGAAAACATCCTTGACCAAAGAGTACTATTAGAAATCCAACATAAATGTATGCTCATTATGTACGTGAAAGATTAGGGGTAACTTTCCTATCATGTATTGAGTAGACTTTGTTTCGTATTGATAAAATTTCTAGTTATTTCCTAATTGTATTTCTATATGGACTTTATACTCTACTTCTAATATTCCTTATTTTTAATTCCGAATTTCAGTTATTTTCTAATTGTATTTCTATATGGACTCTATACTCTACTTCTAATATTCCTTATTTTTAATTCCGAATTTCAGTTATTTCCTAATTGTATTTCTATATGGACTCTAGTCTCCTCTTCTAATATTCCTTATTTTTTAATTCCGAATTTCAACTATTTCTGAATTGTATTTCTATATGGACTTTGCCTTTTCTTTTTCTCCGATTAATGTGAGAATTTCTAGGCCATGAGAGCGAACGTGGAGACTCCTTTTTCTATTTCTTTAATAATATAATAGATGATTGAACATCATATAGATATGACCAGTGTATTGACTGCATTCATGATTAATGATTCAGTTGAGCTAGCAAAACTAGATTAGACATAGCTAATGACGATAAACATTAAAAATGTGTTAAGGTTGTAAAAAATTCTGGACGAAAGAATTGAAGTCGGAACTCATAAATAAACCGGAACCATGCACAAATCACAATTTACAATCTGCAGACAAATAGTCGTTCGGTCAAAGGCTCCTAATATTGATTGCAATTTTATACTTCTTTTTACTTCCACAAGATACCATTGAGAAATAAGACTAACACAAGTTGTGAATATTTTTATCCAGTGTCTGCAGGTGTAGGTCTTGCACTTACGGCCACGCTAGCTACAGTGTTGTTGTGCTACTACTGGACAATGAAGAAAAGAAAGGTGGCAAGAAACAGAGCTGAGTTATTCAGGAAGAATGGAGGATTGCTACTGCAGCAAAGATTTTCGATGATGACATCTCAAGGTGAGGATTCATCAGCAAAGATATTTAGTGCGGAAGAACTCAAGGATGCCACTGACAACTATAGTGAGAGTCGGATCCTTGGTCGAGGTGGAAGTGGGATGGTTTACAAGGGTATCCTTCCGAATAATACCATGGTTGCCATAAAGAAGTCCATCTTGTTTGATGAAAGTCAGGGGGAGCAATTTGCCAATGAGATTACCATCTTATCGCAGATTGATCACCCAAATGTTGTCAAGCTTTTGGGTTGCTGTCTAGAGACAAAAGTTCCGTTGTTGGTTTACGAGTTCATACCTAATGGAACACTCTTCCAGCACATCCACAACAGGAGTTCTTTAAGATGGGAAGATTGCTTAAGGATAGCTGAAGAAACAGCCGAAGCACTCGACTATCTGCACTCTACATCTTCTACACCAATCATTCACAGAGACATCAAATCAAGCAACATACTATTGGATGAGAACTTGATGGCTAAAATATCAGACTTTGGTGCATCAAGATCAGTCCCATTCGATCAAACTCATGTAACAACTCTAATTCAAGGAACAATTGGGTATCTCGATCCTGAATATTTCCAAAGCAGCAAGCTCACAGAGAAGAGTGACGTTTACAGCTTTGGAGTAGTTCTTGCAGAGCTATTGACAAGGCAGAAACCTATTTCTGCAAGCAGGCCGGAGGAATCCTGTAACTTAGCCATGTATATTGTGAATTTATTTAATGAAAGGCGTCTACTACAGGAGATAGAGCCACACATTTTGGCAGAAGCAGGTGAAGAGCAGATACATGCTGTTGCGCAGCTCTCAGTCAGATGCTTAAATTTGAAGGGAGAAGAACGACCAGTTATGAGGGAAGTGGCTTCAGTTCTACATGGGCTAAGAGAGTCGTTTGACGAGGAGCAAATCATCAGAAGAAGCAATGAATCAATACAGATAAGTAATGGACAAGACAGTGTACATAGTGAGGCAAGACCAATTCCCAGCTTGCAGTCTTCAGGAGAAATTACCACCGAGTACAGCTTGCCAGCTGAAATACTGCCTTCTTCTTACTTGGCAAGATGATGCTCTTATTACGATACTGTAAAGGAATTTTGTAAATGTTCACTTCCGTAATTTTTTTAGGCAAAAGATATTAGCCC
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CDS seq | ATGCCGTGTAGAAGAGCAAGCACACCGGCCGCTGCAGCTGCAGCTGATCCTGCTGTGGCTGCATGGCCTCTCACCCCACTGGTGCTGGCGCTCGCCGTCTTCTCGGCGATGCCTCACGTCACGCTCTCCCGGGGACGGGAGAATCCGTGGCCGCCTCTAGAGGGAAACTCGCAGCTGACGACGACGAAGAACCTGTCGTGCGACGAAGTCCCTTATCCCTTCGGCTTAAAAGGCAAATCTGCCCCTGGCTTCAGGGTAACATGCCGGAAAAACGACAGTGCTGCCATGCTCCGCATTGGCCATCAAAAATTTCGAATCGATCAGGTGTCTTCGCAGGAAGGTTTCGTCGTCATATTTGCAGGCCCCATCTACCGGTTGTGCTACGATCGCAACGGCCGGCCGGTCGTGGGGAGCACCGGAATCGGGCCGACGAATTTGACGGACACGCCGTTCTTCTTCTCCAAGCGCAACACGCTCGTCGCCACCGGCTGTTACTCCAACTTTACTGCTACCTTCACCAGCTCGCTACACCATCATGGTTGGTCTACTAACGGAAGCTGCACAACCAACGGCAGCGTAAACTCTGACGGATTGTGCCCCGGGACGGCCTGCTGCGACGCCTACGGCATGCCGTTGGACGACGCGCAGGAGGTCACCTTCGAGTTCAACAAGACATCGGCGAGCGTGGCCGGCACCTGCAGCGCAGCCTTCATCCTCTACCAAGAAGAGCAGATCTTCAAAGTCAGCGGTAACAGCAAGCCAATGCATCTCCACCAAGAAGAGCACATCTTCAGAGTCGGCGGCGGTGACAGCAAGCCAGTGCATCTGGAAGACGTTCTGGTGCCTTTGGGTGAGCGAAGGATGGTCTTGGACTGGGTGATTGGGCGCGCCACCTGTAAGCAAGCCCGGAACAACAGCTTCAAGACACAGTACCGCTGCAACAACGAGAGCTCATGCATGGACAGGTTCGTGGGAGAGGGCTACGTGTGCAGATGCAAAGCAGGGTACGACCAATACAACGGGAATCCATACGAGGCAGGCGGCTGCCAAGCGTACTCTGTCATAACACTCCCGGAGGATATACTTGCTCTTGCCCCAATAATAAGACTGGTGATGGCTACAGGACAGGGACAGGGTGCATTGACTCCCATCGGCCACCTGGCGCCCCTAGTCACAACCAACCGCAAGGTATCATAA
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Protein seq | MPCRRASTPAAAAAADPAVAAWPLTPLVLALAVFSAMPHVTLSRGRENPWPPLEGNSQLTTTKNLSCDEVPYPFGLKGKSAPGFRVTCRKNDSAAMLRIGHQKFRIDQVSSQEGFVVIFAGPIYRLCYDRNGRPVVGSTGIGPTNLTDTPFFFSKRNTLVATGCYSNFTATFTSSLHHHGWSTNGSCTTNGSVNSDGLCPGTACCDAYGMPLDDAQEVTFEFNKTSASVAGTCSAAFILYQEEQIFKVSGNSKPMHLHQEEHIFRVGGGDSKPVHLEDVLVPLGERRMVLDWVIGRATCKQARNNSFKTQYRCNNESSCMDRFVGEGYVCRCKAGYDQYNGNPYEAGGCQAYSVITLPEDILALAPIIRLVMATGQGQGALTPIGHLAPLVTTNRKVS |
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Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsZS97_04G0480700 | OsZS97_04T0480700-mRNA-1 | Chr04 | 31882215 | 31888809 | + | makerRMon | ||
CDS seq | ATGCCGTGTAGAAGAGCAAGCACACCGGCCGCTGCAGCTGCAGCTGATCCTGCTGTGGCTGCATGGCCTCTCACCCCACTGGTGCTGGCGCTCGCCGTCTTCTCGGCGATGCCTCACGTCACGCTCTCCCGGGGACGGGAGAATCCGTGGCCGCCTCTAGAGGGAAACTCGCAGCTGACGACGACGAAGAACCTGTCGTGCGACGAAGTCCCTTATCCCTTCGGCTTAAAAGGCAAATCTGCCCCTGGCTTCAGGGTAACATGCCGGAAAAACGACAGTGCTGCCATGCTCCGCATTGGCCATCAAAAATTTCGAATCGATCAGGTGTCTTCGCAGGAAGGTTTCGTCGTCATATTTGCAGGCCCCATCTACCGGTTGTGCTACGATCGCAACGGCCGGCCGGTCGTGGGGAGCACCGGAATCGGGCCGACGAATTTGACGGACACGCCGTTCTTCTTCTCCAAGCGCAACACGCTCGTCGCCACCGGCTGTTACTCCAACTTTACTGCTACCTTCACCAGCTCGCTACACCATCATGGTTGGTCTACTAACGGAAGCTGCACAACCAACGGCAGCGTAAACTCTGACGGATTGTGCCCCGGGACGGCCTGCTGCGACGCCTACGGCATGCCGTTGGACGACGCGCAGGAGGTCACCTTCGAGTTCAACAAGACATCGGCGAGCGTGGCCGGCACCTGCAGCGCAGCCTTCATCCTCTACCAAGAAGAGCAGATCTTCAAAGTCAGCGGTAACAGCAAGCCAATGCATCTCCACCAAGAAGAGCACATCTTCAGAGTCGGCGGCGGTGACAGCAAGCCAGTGCATCTGGAAGACGTTCTGGTGCCTTTGGGTGAGCGAAGGATGGTCTTGGACTGGGTGATTGGGCGCGCCACCTGTAAGCAAGCCCGGAACAACAGCTTCAAGACACAGTACCGCTGCAACAACGAGAGCTCATGCATGGACAGGTTCGTGGGAGAGGGCTACGTGTGCAGATGCAAAGCAGGGTACGACCAATACAACGGGAATCCATACGAGGCAGGCGGCTGCCAAGCGTACTCTGTCATAACACTCCCGGAGGATATACTTGCTCTTGCCCCAATAATAAGACTGGTGATGGCTACAGGACAGGGACAGGGTGCATTGACTCCCATCGGCCACCTGGCGCCCCTAGTCACAACCAACCGCAAGGTATCATAA
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Protein seq | MPCRRASTPAAAAAADPAVAAWPLTPLVLALAVFSAMPHVTLSRGRENPWPPLEGNSQLTTTKNLSCDEVPYPFGLKGKSAPGFRVTCRKNDSAAMLRIGHQKFRIDQVSSQEGFVVIFAGPIYRLCYDRNGRPVVGSTGIGPTNLTDTPFFFSKRNTLVATGCYSNFTATFTSSLHHHGWSTNGSCTTNGSVNSDGLCPGTACCDAYGMPLDDAQEVTFEFNKTSASVAGTCSAAFILYQEEQIFKVSGNSKPMHLHQEEHIFRVGGGDSKPVHLEDVLVPLGERRMVLDWVIGRATCKQARNNSFKTQYRCNNESSCMDRFVGEGYVCRCKAGYDQYNGNPYEAGGCQAYSVITLPEDILALAPIIRLVMATGQGQGALTPIGHLAPLVTTNRKVS
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.012057 | 0.49032 | 0.008632 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0598800 | SBH | 0.0 | 0.000000 | 0.268550 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g51030 | SBH | 0.046090 | 0.066116 | 0.060309 |
Nipponbare | IRGSP 1.0 | RAP-db | Os04g0598800 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0025230 | RBH | 0.000000 | 1.070638 | 0.585096 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0026010 | RBH | 0.052413 | 0.438762 | 0.195252 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0025730 | RBH | 0.171826 | 0.0 | 0.000000 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0025460 | RBH | 0.029191 | 0.072435 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0025710 | RBH | 0.0 | 2.825776 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0477100 | RBH | 0.636994 | 1.9159935 | 0.2046465 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0024460 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0024930 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0024760 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0024850 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0025280 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0025450 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G024680 | RBH | 0.058891 | 0.676021 | 0.226318 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0024570 | RBH | 0.0 | 0.000000 | 0.597575 |