Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_04g0024570 | OGI:04089550 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr04:30033996-30038202 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | aatctgagaaacaattaaaaatttaaaaccaacatgtagccagtagccacaagagaattagcacgctttcggcgacaatgaccccttcacagttcacactcccaacatagcttctctcggcgctcgtctatgctgtatgcaccactgagaaggagaacagcaagcaaaggcgcgacgacatgccgtgcagaagagcaagcacaccggccgctgcagctgcagctgatcctgctgtggctgcatggcctctcaccccactggtgctggcgctcgccgtcttctcggcgatgcctcacgtcacgctctcccggggacgggagaatccgtggccgcctctagagggaaactcgcagctgacgacgacgaagaacctgtcgtgcgacgaagtcccttatcccttcggcttaaaaggcaaatctgcccctggcttcagggtaacatgccggaaaaacgacagtgctgccatgctccgcattggccatcAaaaatttcgaatcgatcaggtgtcttcgcaggaaggtttcgtcgtcatatttgcaggccccatctaccggttgtgctacgatcgcaacggccggccggtcgtggggagcaccggaatcgggccgacgaatttgacggacacgccgttcttcttctccgagcgcaacaggctcgtcgccaccggctgctattccagctttaatgctaccttcaccagctcgcgacgccatcaaggttggtctactaacggaagcggcacaaccaagtccagcgtgaactctgacgcatcgtgccccgggacggcctgctgcgatgcctacggcatgccgttggacgacgcgcaggaggtcaccttcgagttcaacaagacatcggcgagcgtggccggcacctgcagcgcagccttcatcctctaccaagaagaacagatcttcaaagtcagcggtaacagcaagccaatgcatctccaccaagaagagcagatcttcagagtcggcggcggtgacagcaagccagtgcatctggaagacgttctggtgcctttgggtgagcgaaggatggtcttggactgggtgattgggcgcgccacctgtgagcaagcccggaacaacagcttcaagacacagtaccgctgcaacaacgagagctcatgcatggacaggttcatgggagagggctacgtgtgcagatgcaaagcagggtacgaccaacacaacgggaatccatacgaggcaggcggctgccaaggtaaatagtagatacttctaaacacagtgatctaaaaaatatgcactagctagtgaaaacagtttgttatagtttctttctgtttgtatcatggcagaattcaattaccatagaacttaactaactgctatgaatagaactgtatttttctgctttctcaatgtggcttcacactatttatgaagatatcaacgaatgccggtctctcatttacaacaactgtagcgtactctgtcataacactcccggaggatatacttgctcttgccccaataataagactggtgatggctacaggacagggacagggtgcattgactcccatcggccacctggtaaatacatgccatatattttttccgactgcttttgtttaagataatgggatatttttttagattgcatataatcctacttattctagaatttctgttcaaacaaccatattaatcaccacgtgttatttctagaccaattttgagataagttggaaaactcaaaaaaaaaaaagcttttaaacggttcttcctgggtacttttatgtttgattggatgagaaaagatgaaaggtctaaattgattctactaccaataaataccacagtaagaattttgttccttttaacgtgactatgcatgaacttaggattgcctgggtgataggagctttgttccctttttacttaaagaaatgtcaatatgaattgatatatttcttccggttgaaacgctaaaatgatattgtatgcatctcctatatatggctggattacgctgtaatatttcttctctaaaaaaattctgcaatagttactcgtaataatgcgtgatgatctgaccaagatcatatattctctctctcatgcaggcgcccctacccacaaccaaccgcaaggtatcataaaacaaagtgctttgttcaccacacagaagagcattttaagtgcagtctttctaatcaggaaattattatttgttcaatgtaccgggagaacgttcgaaatcttgtttacaacatctaataatgaaccagtagcggcctaatcatttttcatttggaaaacatctactaattgcatgcaatgtactattattaggcctagatgtgtgcagagaattgaacccttgcacgtactcaaaatcctgcaaggatgagcaaggagttacttcgtgtgtttgcccgaaaggcatgatcggagatggccagaagaatgggagtggctgcaaaaagcagtttcctttatataccgctttgggtaaatatgctcaacacccggcattccacatcagatcattcattttctctcttttatttttaattcctctgctattaatacagttgtcaaaaatatctcccgtgcagaactgctaatctacagtatatagccgctgatgattacgtcattactaacatgaatgattgaacatcatatagatatgaccagtgtattgactgcattcatgattaatgattcagttgagctagcaaaactagattagacatagctaatgacgataaacattaaaaatgtgttaaggttgtaaaaaatacctcaatattgtttctggacgaaagaattgaagtcggagctcataaataaaccggaaccatgcacaaatcacaatttacaatctgcagacaaatagtcgttcggtcaaaggctcctaatattgattgcaattttatacttctttttacttccacaagatatcattgagaaataagactaacacaagttgtgaatattctcatccagtgtctgcaggtgtagctcttgcacttacggccacgctagctacagtgttgttgtgctactacttgacaatgaagaaaagaaaggtggaaagaaacagagctgagttattcaggaagaatggaggattgctactgcagcaaagattttcgatgatgacatctcaaggtgaggattcatcagcgaagatatttagtgcggaagaactcaaggatgccactgacaactatagtgagagtcggatccttggtcgaggcggaagtgggatggtttacaagggtatccttccaaataataccacggttgccataaagaagtccatcttgtttgatgaaagtcaggtggagcaatttgccaatgagattaccatcttatcgcagattgatcacccaaatgttgtcaagcttttgggttgctgtctagagacaaacgttccgttgttggtttacgagttcatacctaatggaacactcttccagcacatccacaacaggagttctttaagatgggaagattgcttaaggatagctgaagaaacagccgaagcacttgactatctgcactctacatcttctacaccaatcattcacagagacatcaaatcaagcaacatacttttggatgagaacttgatggctaaaatatcagactttggtgcatcaagatcagtcccatttgatcaaactcatgtaacaactctaattcaaggaacaattgggtatctcgatcctgaatatttccaaagcagcaagctcacagagaagagtgacgtttacagctttggagtagttcttgcagagctattgacaaggcagaaacctatttctgcaagcaggccggaggaatcctgtaacttagccatgtatattgtgaatttatttaatgaaaggcgtctactacaggagatagagccacacattttggcagaagcaggtgaagagcagatacatgctgttgcccagctctcagtcagatgcttaaatttgaagggagaagaacgaccagttatgagggaagtggcttcagttctacatgggctaagagagtcgtttgacgaggagcaaatcatcagaagaagcaatgaatcaatacagataactaatggacaagacagtgtacatagtgaggcaagaccaattcccagcttgcagtcttcaggggaaattaccactgagtacagcttgccagctgaaatactgccttcttcttacttggcaagatga
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| CDS seq | atgccgtgcagaagagcaagcacaccggccgctgcagctgcagctgatcctgctgtggctgcatggcctctcaccccactggtgctggcgctcgccgtcttctcggcgatgcctcacgtcacgctctcccggggacgggagaatccgtggccgcctctagagggaaactcgcagctgacgacgacgaagaacctgtcgtgcgacgaagtcccttatcccttcggcttaaaaggcaaatctgcccctggcttcagggtaacatgccggaaaaacgacagtgctgccatgctccgcattggccatcAaaaatttcgaatcgatcaggtgtcttcgcaggaaggtttcgtcgtcatatttgcaggccccatctaccggttgtgctacgatcgcaacggccggccggtcgtggggagcaccggaatcgggccgacgaatttgacggacacgccgttcttcttctccgagcgcaacaggctcgtcgccaccggctgctattccagctttaatgctaccttcaccagctcgcgacgccatcaaggttggtctactaacggaagcggcacaaccaagtccagcgtgaactctgacgcatcgtgccccgggacggcctgctgcgatgcctacggcatgccgttggacgacgcgcaggaggtcaccttcgagttcaacaagacatcggcgagcgtggccggcacctgcagcgcagccttcatcctctaccaagaagaacagatcttcaaagtcagcggtaacagcaagccaatgcatctccaccaagaagagcagatcttcagagtcggcggcggtgacagcaagccagtgcatctggaagacgttctggtgcctttgggtgagcgaaggatggtcttggactgggtgattgggcgcgccacctgtgagcaagcccggaacaacagcttcaagacacagtaccgctgcaacaacgagagctcatgcatggacaggttcatgggagagggctacgtgtgcagatgcaaagcagggtacgaccaacacaacgggaatccatacgaggcaggcggctgccaaggcgcccctacccacaaccaaccgcaaggcctagatgtgtgcagagaattgaacccttgcacgtactcaaaatcctgcaaggatgagcaaggagttacttcgtgtgtttgcccgaaaggcatgatcggagatggccagaagaatgggagtggctgcaaaaagcagtttcctttatataccgctttgggtgtagctcttgcacttacggccacgctagctacagtgttgttgtgctactacttgacaatgaagaaaagaaaggtggaaagaaacagagctgagttattcaggaagaatggaggattgctactgcagcaaagattttcgatgatgacatctcaaggtgaggattcatcagcgaagatatttagtgcggaagaactcaaggatgccactgacaactatagtgagagtcggatccttggtcgaggcggaagtgggatggtttacaagggtatccttccaaataataccacggttgccataaagaagtccatcttgtttgatgaaagtcaggtggagcaatttgccaatgagattaccatcttatcgcagattgatcacccaaatgttgtcaagcttttgggttgctgtctagagacaaacgttccgttgttggtttacgagttcatacctaatggaacactcttccagcacatccacaacaggagttctttaagatgggaagattgcttaaggatagctgaagaaacagccgaagcacttgactatctgcactctacatcttctacaccaatcattcacagagacatcaaatcaagcaacatacttttggatgagaacttgatggctaaaatatcagactttggtgcatcaagatcagtcccatttgatcaaactcatgtaacaactctaattcaaggaacaattgggtatctcgatcctgaatatttccaaagcagcaagctcacagagaagagtgacgtttacagctttggagtagttcttgcagagctattgacaaggcagaaacctatttctgcaagcaggccggaggaatcctgtaacttagccatgtatattgtgaatttatttaatgaaaggcgtctactacaggagatagagccacacattttggcagaagcaggtgaagagcagatacatgctgttgcccagctctcagtcagatgcttaaatttgaagggagaagaacgaccagttatgagggaagtggcttcagttctacatgggctaagagagtcgtttgacgaggagcaaatcatcagaagaagcaatgaatcaatacagataactaatggacaagacagtgtacatagtgaggcaagaccaattcccagcttgcagtcttcaggggaaattaccactgagtacagcttgccagctgaaatactgccttcttcttacttggcaagatga
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| Protein seq | MPCRRASTPAAAAAADPAVAAWPLTPLVLALAVFSAMPHVTLSRGRENPWPPLEGNSQLTTTKNLSCDEVPYPFGLKGKSAPGFRVTCRKNDSAAMLRIGHQKFRIDQVSSQEGFVVIFAGPIYRLCYDRNGRPVVGSTGIGPTNLTDTPFFFSERNRLVATGCYSSFNATFTSSRRHQGWSTNGSGTTKSSVNSDASCPGTACCDAYGMPLDDAQEVTFEFNKTSASVAGTCSAAFILYQEEQIFKVSGNSKPMHLHQEEQIFRVGGGDSKPVHLEDVLVPLGERRMVLDWVIGRATCEQARNNSFKTQYRCNNESSCMDRFMGEGYVCRCKAGYDQHNGNPYEAGGCQGAPTHNQPQGLDVCRELNPCTYSKSCKDEQGVTSCVCPKGMIGDGQKNGSGCKKQFPLYTALGVALALTATLATVLLCYYLTMKKRKVERNRAELFRKNGGLLLQQRFSMMTSQGEDSSAKIFSAEELKDATDNYSESRILGRGGSGMVYKGILPNNTTVAIKKSILFDESQVEQFANEITILSQIDHPNVVKLLGCCLETNVPLLVYEFIPNGTLFQHIHNRSSLRWEDCLRIAEETAEALDYLHSTSSTPIIHRDIKSSNILLDENLMAKISDFGASRSVPFDQTHVTTLIQGTIGYLDPEYFQSSKLTEKSDVYSFGVVLAELLTRQKPISASRPEESCNLAMYIVNLFNERRLLQEIEPHILAEAGEEQIHAVAQLSVRCLNLKGEERPVMREVASVLHGLRESFDEEQIIRRSNESIQITNGQDSVHSEARPIPSLQSSGEITTEYSLPAEILPSSYLAR |
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| Function | Wall-associated receptor kinase 5 [UniProtKB/Swiss-Prot:Q9LMN7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_04g0024570 | OsNaBo_04g0024570.01 | Chr04 | 30033996 | 30038202 | + | NAM | ||
| CDS seq | atgccgtgcagaagagcaagcacaccggccgctgcagctgcagctgatcctgctgtggctgcatggcctctcaccccactggtgctggcgctcgccgtcttctcggcgatgcctcacgtcacgctctcccggggacgggagaatccgtggccgcctctagagggaaactcgcagctgacgacgacgaagaacctgtcgtgcgacgaagtcccttatcccttcggcttaaaaggcaaatctgcccctggcttcagggtaacatgccggaaaaacgacagtgctgccatgctccgcattggccatcAaaaatttcgaatcgatcaggtgtcttcgcaggaaggtttcgtcgtcatatttgcaggccccatctaccggttgtgctacgatcgcaacggccggccggtcgtggggagcaccggaatcgggccgacgaatttgacggacacgccgttcttcttctccgagcgcaacaggctcgtcgccaccggctgctattccagctttaatgctaccttcaccagctcgcgacgccatcaaggttggtctactaacggaagcggcacaaccaagtccagcgtgaactctgacgcatcgtgccccgggacggcctgctgcgatgcctacggcatgccgttggacgacgcgcaggaggtcaccttcgagttcaacaagacatcggcgagcgtggccggcacctgcagcgcagccttcatcctctaccaagaagaacagatcttcaaagtcagcggtaacagcaagccaatgcatctccaccaagaagagcagatcttcagagtcggcggcggtgacagcaagccagtgcatctggaagacgttctggtgcctttgggtgagcgaaggatggtcttggactgggtgattgggcgcgccacctgtgagcaagcccggaacaacagcttcaagacacagtaccgctgcaacaacgagagctcatgcatggacaggttcatgggagagggctacgtgtgcagatgcaaagcagggtacgaccaacacaacgggaatccatacgaggcaggcggctgccaaggcgcccctacccacaaccaaccgcaaggcctagatgtgtgcagagaattgaacccttgcacgtactcaaaatcctgcaaggatgagcaaggagttacttcgtgtgtttgcccgaaaggcatgatcggagatggccagaagaatgggagtggctgcaaaaagcagtttcctttatataccgctttgggtgtagctcttgcacttacggccacgctagctacagtgttgttgtgctactacttgacaatgaagaaaagaaaggtggaaagaaacagagctgagttattcaggaagaatggaggattgctactgcagcaaagattttcgatgatgacatctcaaggtgaggattcatcagcgaagatatttagtgcggaagaactcaaggatgccactgacaactatagtgagagtcggatccttggtcgaggcggaagtgggatggtttacaagggtatccttccaaataataccacggttgccataaagaagtccatcttgtttgatgaaagtcaggtggagcaatttgccaatgagattaccatcttatcgcagattgatcacccaaatgttgtcaagcttttgggttgctgtctagagacaaacgttccgttgttggtttacgagttcatacctaatggaacactcttccagcacatccacaacaggagttctttaagatgggaagattgcttaaggatagctgaagaaacagccgaagcacttgactatctgcactctacatcttctacaccaatcattcacagagacatcaaatcaagcaacatacttttggatgagaacttgatggctaaaatatcagactttggtgcatcaagatcagtcccatttgatcaaactcatgtaacaactctaattcaaggaacaattgggtatctcgatcctgaatatttccaaagcagcaagctcacagagaagagtgacgtttacagctttggagtagttcttgcagagctattgacaaggcagaaacctatttctgcaagcaggccggaggaatcctgtaacttagccatgtatattgtgaatttatttaatgaaaggcgtctactacaggagatagagccacacattttggcagaagcaggtgaagagcagatacatgctgttgcccagctctcagtcagatgcttaaatttgaagggagaagaacgaccagttatgagggaagtggcttcagttctacatgggctaagagagtcgtttgacgaggagcaaatcatcagaagaagcaatgaatcaatacagataactaatggacaagacagtgtacatagtgaggcaagaccaattcccagcttgcagtcttcaggggaaattaccactgagtacagcttgccagctgaaatactgccttcttcttacttggcaagatga
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| Protein seq | MPCRRASTPAAAAAADPAVAAWPLTPLVLALAVFSAMPHVTLSRGRENPWPPLEGNSQLTTTKNLSCDEVPYPFGLKGKSAPGFRVTCRKNDSAAMLRIGHQKFRIDQVSSQEGFVVIFAGPIYRLCYDRNGRPVVGSTGIGPTNLTDTPFFFSERNRLVATGCYSSFNATFTSSRRHQGWSTNGSGTTKSSVNSDASCPGTACCDAYGMPLDDAQEVTFEFNKTSASVAGTCSAAFILYQEEQIFKVSGNSKPMHLHQEEQIFRVGGGDSKPVHLEDVLVPLGERRMVLDWVIGRATCEQARNNSFKTQYRCNNESSCMDRFMGEGYVCRCKAGYDQHNGNPYEAGGCQGAPTHNQPQGLDVCRELNPCTYSKSCKDEQGVTSCVCPKGMIGDGQKNGSGCKKQFPLYTALGVALALTATLATVLLCYYLTMKKRKVERNRAELFRKNGGLLLQQRFSMMTSQGEDSSAKIFSAEELKDATDNYSESRILGRGGSGMVYKGILPNNTTVAIKKSILFDESQVEQFANEITILSQIDHPNVVKLLGCCLETNVPLLVYEFIPNGTLFQHIHNRSSLRWEDCLRIAEETAEALDYLHSTSSTPIIHRDIKSSNILLDENLMAKISDFGASRSVPFDQTHVTTLIQGTIGYLDPEYFQSSKLTEKSDVYSFGVVLAELLTRQKPISASRPEESCNLAMYIVNLFNERRLLQEIEPHILAEAGEEQIHAVAQLSVRCLNLKGEERPVMREVASVLHGLRESFDEEQIIRRSNESIQITNGQDSVHSEARPIPSLQSSGEITTEYSLPAEILPSSYLAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.597575 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0598600 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g51030 | SBH | 0.046090 | 0.066116 | 0.060309 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0598600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0025230 | RBH | 0.000000 | 1.070638 | 0.585096 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0026010 | RBH | 0.052413 | 0.438762 | 0.195252 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0025730 | RBH | 0.171826 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0025460 | RBH | 0.029191 | 0.072435 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0025710 | RBH | 0.0 | 2.825776 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0477100 | RBH | 0.636994 | 1.9159935 | 0.2046465 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0024460 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0480700 | RBH | 0.012057 | 0.49032 | 0.008632 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0024930 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0024760 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0024850 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0025280 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0025450 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G024680 | RBH | 0.058891 | 0.676021 | 0.226318 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0025890 | SBH | 0.0 | 0.0 | 0.0 |
