Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_04G0475200 | OGI:04088650 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr04:31547961-31551537 | ||||||||
| Gene Symbol | OsbHLH050 | ||||||||||
| DNA seq | ATGGCGCTTGACACCCTGTGCAGCGCCGGCGGCGACGTCCTCATCTACGACACGTTCAACGCCTCCGCCGCGGCGGCGGCGGCGGTTGTGCCGCCGGCGAGCTTCCTCTTCGGGAATAATAATGCCGGCGGCGCGGCGGGGACGGAGACGAGGGTGCAGGTGGCGGCCGGGGCGGTGCCGGAGGTGGACCAGCTGCTGAAGCAGGCTCAGCAGCCGGGGAGGAGGAAGCGGCGGCGGCGGGCGAGGAGCTGCAAGAGCCGGGAGGACGCCGAGAGCCAGCGGATGACCCACATTGCCGTCGAGCGCAACCGCCGCCGCCAGATGAACGAGTACCTCGCCGTGCTCCGGTCGCTCATGCCGGAGTCCTACGTCCACCGGGTACGTACACTAGCACTTACTAACATTCTACATTTCCTGTACGCTGAACTTGGAACTCTGATCTGAGGTGAGAACTGATCCTTAGGGTTCATCTCCCTAGCTTGATTCTCATTTGGACATTGGATTTTGGGTTGTGCTGAACTGGAGTTGGCAAGAGAATGTTTCGGCGAGAAGCACTGTGATTTTTCTCTAGTATAAAAATCGTACCATTATGTACCCATCCAACTTTTTTTTAAGAAAGATTCGTTCAACTTTTGTGATGTTTAAGCACTTTTTTTTTTTGCTCTTTCTCGTCAACTGAATATTGAGGAATTTCCAGGTCTCTTTCATGCTATCCCAATAATGAATCATTAATTCCTCCATGGGGCATACGTTCCTCGGCCACTTTGTGCCATTAATGTGCATGCCCCCTCCATGTCATTATCATTGCTTGAATCATAGTAACATTATTACTGTTCTAGTTTACTCTCGCTGACACAACTGCTTCGCTCTAGAATCGCGATGATGCTAGGTATGCTAGGTTGATTTGATCTGTCGTCTCTGCACTTCACTGTCGCTCACTTGCTTGCTTTTAATTGGTCGGCGTGTAGGGCGACCAGGCGTCCATTGTCGGCGGCGCCATTGATTTCGTGAAGGAGCTCGAGCAGCTGCTGCAATCCCTCGAGGCGCAGAAGCGCACGCTGCTGATGCAGCCGCCGCCGCCACCGCAGCAGCAGCGGGAGCCCAAGTGTGATGCCGCGGACTCCACGAGCGCGGCCGATCAGGAGACTCCGGCGGCGGCGGCGGCGGATGGACCGCCGTTCGCGCGGTTCTTCACGTACCCGCAGTACGTGTGGTGCCACAACCCGGCGCAGGACGGCGGCGGGGGCGGGGGCGCGGCGGCGGAGAACCGCGCCGGAGTGGCGGACATCGAGGTGAGCCTTGTGGAGACGCACGCCAGCATCCGGGTGATGGCGGCGCGGCGGCCGGGGCAGCTGCTCAAGATGGTCGCCGGCCTGCAGGCGCTCCGGCTCACCGTCCTCCACCTCAACGTCACGGCCCTCGGCTCGCTTGCCCTCTACTCCATCAGCGTCAAGGTACGTATACACAGGAGTCTGCTGCCAAAAAAATTCCTCCGTTTTCTTGCTGAAATATGGCCCATTGTTGCTTTTGCGTTTCCTTTTTAAGCATAAACCGTCAGAAAAAAAAAGGCTGAGAAGTTTCGTCATCCAAGATACATACTCCACATAAGATACGCATGAGATGTCCGCGAGTTAGATTAATAACACGAATAATCTATAATCTACTTGCTAGTACTAGTAGAACGTTTAACCGTCCGTCTTATTTGAAAAAAATATGAAAAAATTAAAAAGACAAGTCATGCATAAAATATTAATCATGTATTATCATCTAACAACAATAAAAATACGAATTATAAAAAAATTTCATATAAGACGGACAGTCAAAATTGAACACGAAAACTTAGGTTTGACTTTTTTTTTTGGAACGGAAAGAGTACGTATGTGCAGCACCTGATGTGACAAACTGACCAACCAAGTTTGCAAGAGAGACAGCCATACTTCTGATCAGCTCAGATATACAAACTACTACACCCAAATACAAACTACCAAACGGATTGTCTTAGCATATGGCCAACACGACTCCACATGTGTACAGATCGATGATGCGTGAGGCCATGAGCCTCATACACCGTGCTTGCGTGTACGCGGCTCAGCTGGCGCTGCACACGTCTTGACAATCATGAGAGGCCATACTCGCCAGCCACACAGGGAAGCAAAATCATCTCCATGCATCTGTTGCTGCCTATATAGTGTAGTACACGAGAACAATAAACGTGTCATAAATTCTCCTCTGTTACCCATCGTACGTAGACCAACATCCCCGGGGGTATTTTACTATACTAGTAGAGGCTATTGCATGGGTGATCACTGATCAGAATTGCGTCTCGCTGCTGCTGCTGTTGATGCTGCTCCATATCTGCCATGGCCGATTGCTTTTGACCAGAGATTCCATGGCGGAAAGGCCATTGCTTCCCTTGGCCCCTTGGGTGTGTTCTTTCTCTGTGCTCTGTATCTGTGGTACAGTACTACAGTGGTAAGAGTACGTAGCTCTGAACTTGATGTGCCCCAGTCGACTGGTGCTGCACTATATCAAGCCATGGCACTTCATACTCACAAAGGGAGATGCAGAATTTTATATATATATGTTTTATACTCCTAGATAGGTTTAGAGAGAGAGGGAGGGAGAGAGAGGACGATGGACAGCACTGTCACGGAGAATCTTTCTGCTGGGGAGTAGATTGCCAAGGCGAAATCTCAGCAGAAAAGAAAAAAAGGGCTACAGAGTTTTGTGTGTCATTGTGTGCTGCTGCCGCCTTTTCTTGCGCTGTTTTATTTACAGCAGAGAATCTGCCTTTACGAAACGATCGCTCTATTGAAAAGCGTCGCCTGTGCCTCGCTTTTTTCCTCCTCGGCTTTGTGCTTGTGGAGCCTCTGTGTCTGTGTGACTAGGCGATCGACTCGTGGTAGCCTCTCTGTCTGTCCCGTGTAATACCTTTGCTTATCAATCGCCGTTTGATTTCCCTCGAATCGCCCACTTTGCCTTGCGGGCATTAATTTGTGTACTTTGTGTTGCGTTGGCCGGATGTGAATGTGATTTGTGGCATCAAGCAATCCTTTGATTTTTGTGTGTGGATTTTGCATTTGCAGGTGGAGGAAGGGTGCGGCATGGCGACGGTGGACGACATCGCAGCGGCGGTGCACCACGTGCTCTGCATCATCGACGCCGAGGCGGCGTCGCAGATGCTGCTCGCCGGGGAGGCCTCCGGTTAGCGTGGCCACCTAGCAAGATAGGCGCGCGGCGGCGGCCGGTGTAACAAATCTGTAAAGTGTAGCGGATCTCGATCGATCTCTCCCCTCCCGTAGGCGAGTCGGGTGATTTGGGGGTCGGTGGCGTAGGGCAAAAGCCCGTGTAAGTGCAATAACATGCGGCCCGTTGTAATCCTAGCCGGTTTTTTTTTTTTTTTTTTGCCGTCGAGTGTGTGCGTTTTGCGGTTTTCTCGGCGGAAGTCGACGTGGAATCCGGGGGAGTGAGACGGTGAAGAGAGGGTTTTTTTATCCTTGCTTGTCCCTCCATGTTGGGCCGACTAGGTACACAGCCTATGGGCTTGAGATTAGCACATGGTCCGGCCCAATTGAAC
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| CDS seq | ATGGCGCTTGACACCCTGTGCAGCGCCGGCGGCGACGTCCTCATCTACGACACGTTCAACGCCTCCGCCGCGGCGGCGGCGGCGGTTGTGCCGCCGGCGAGCTTCCTCTTCGGGAATAATAATGCCGGCGGCGCGGCGGGGACGGAGACGAGGGTGCAGGTGGCGGCCGGGGCGGTGCCGGAGGTGGACCAGCTGCTGAAGCAGGCTCAGCAGCCGGGGAGGAGGAAGCGGCGGCGGCGGGCGAGGAGCTGCAAGAGCCGGGAGGACGCCGAGAGCCAGCGGATGACCCACATTGCCGTCGAGCGCAACCGCCGCCGCCAGATGAACGAGTACCTCGCCGTGCTCCGGTCGCTCATGCCGGAGTCCTACGTCCACCGGGGCGACCAGGCGTCCATTGTCGGCGGCGCCATTGATTTCGTGAAGGAGCTCGAGCAGCTGCTGCAATCCCTCGAGGCGCAGAAGCGCACGCTGCTGATGCAGCCGCCGCCGCCACCGCAGCAGCAGCGGGAGCCCAAGTGTGATGCCGCGGACTCCACGAGCGCGGCCGATCAGGAGACTCCGGCGGCGGCGGCGGCGGATGGACCGCCGTTCGCGCGGTTCTTCACGTACCCGCAGTACGTGTGGTGCCACAACCCGGCGCAGGACGGCGGCGGGGGCGGGGGCGCGGCGGCGGAGAACCGCGCCGGAGTGGCGGACATCGAGGTGAGCCTTGTGGAGACGCACGCCAGCATCCGGGTGATGGCGGCGCGGCGGCCGGGGCAGCTGCTCAAGATGGTCGCCGGCCTGCAGGCGCTCCGGCTCACCGTCCTCCACCTCAACGTCACGGCCCTCGGCTCGCTTGCCCTCTACTCCATCAGCGTCAAGAGATTCCATGGCGGAAAGGCCATTGCTTCCCTTGGCCCCTTGGGTGTGTTCTTTCTCTGTGCTCTGTATCTGTGGTACAGTACTACAGTGGTAAGAGTGGAGGAAGGGTGCGGCATGGCGACGGTGGACGACATCGCAGCGGCGGTGCACCACGTGCTCTGCATCATCGACGCCGAGGCGGCGTCGCAGATGCTGCTCGCCGGGGAGGCCTCCGGTTAG
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| Protein seq | MALDTLCSAGGDVLIYDTFNASAAAAAAVVPPASFLFGNNNAGGAAGTETRVQVAAGAVPEVDQLLKQAQQPGRRKRRRRARSCKSREDAESQRMTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQLLQSLEAQKRTLLMQPPPPPQQQREPKCDAADSTSAADQETPAAAAADGPPFARFFTYPQYVWCHNPAQDGGGGGGAAAENRAGVADIEVSLVETHASIRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLALYSISVKRFHGGKAIASLGPLGVFFLCALYLWYSTTVVRVEEGCGMATVDDIAAAVHHVLCIIDAEAASQMLLAGEASG |
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| Function | Transcription factor bHLH96 [UniProtKB/Swiss-Prot:Q9C7T4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_04G0475200 | OsZS97_04T0475200.1 | Chr04 | 31547961 | 31551537 | + | makerRMon | ||
| CDS seq | ATGGCGCTTGACACCCTGTGCAGCGCCGGCGGCGACGTCCTCATCTACGACACGTTCAACGCCTCCGCCGCGGCGGCGGCGGCGGTTGTGCCGCCGGCGAGCTTCCTCTTCGGGAATAATAATGCCGGCGGCGCGGCGGGGACGGAGACGAGGGTGCAGGTGGCGGCCGGGGCGGTGCCGGAGGTGGACCAGCTGCTGAAGCAGGCTCAGCAGCCGGGGAGGAGGAAGCGGCGGCGGCGGGCGAGGAGCTGCAAGAGCCGGGAGGACGCCGAGAGCCAGCGGATGACCCACATTGCCGTCGAGCGCAACCGCCGCCGCCAGATGAACGAGTACCTCGCCGTGCTCCGGTCGCTCATGCCGGAGTCCTACGTCCACCGGGGCGACCAGGCGTCCATTGTCGGCGGCGCCATTGATTTCGTGAAGGAGCTCGAGCAGCTGCTGCAATCCCTCGAGGCGCAGAAGCGCACGCTGCTGATGCAGCCGCCGCCGCCACCGCAGCAGCAGCGGGAGCCCAAGTGTGATGCCGCGGACTCCACGAGCGCGGCCGATCAGGAGACTCCGGCGGCGGCGGCGGCGGATGGACCGCCGTTCGCGCGGTTCTTCACGTACCCGCAGTACGTGTGGTGCCACAACCCGGCGCAGGACGGCGGCGGGGGCGGGGGCGCGGCGGCGGAGAACCGCGCCGGAGTGGCGGACATCGAGGTGAGCCTTGTGGAGACGCACGCCAGCATCCGGGTGATGGCGGCGCGGCGGCCGGGGCAGCTGCTCAAGATGGTCGCCGGCCTGCAGGCGCTCCGGCTCACCGTCCTCCACCTCAACGTCACGGCCCTCGGCTCGCTTGCCCTCTACTCCATCAGCGTCAAGAGATTCCATGGCGGAAAGGCCATTGCTTCCCTTGGCCCCTTGGGTGTGTTCTTTCTCTGTGCTCTGTATCTGTGGTACAGTACTACAGTGGTAAGAGTGGAGGAAGGGTGCGGCATGGCGACGGTGGACGACATCGCAGCGGCGGTGCACCACGTGCTCTGCATCATCGACGCCGAGGCGGCGTCGCAGATGCTGCTCGCCGGGGAGGCCTCCGGTTAG
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| Protein seq | MALDTLCSAGGDVLIYDTFNASAAAAAAVVPPASFLFGNNNAGGAAGTETRVQVAAGAVPEVDQLLKQAQQPGRRKRRRRARSCKSREDAESQRMTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQLLQSLEAQKRTLLMQPPPPPQQQREPKCDAADSTSAADQETPAAAAADGPPFARFFTYPQYVWCHNPAQDGGGGGGAAAENRAGVADIEVSLVETHASIRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLALYSISVKRFHGGKAIASLGPLGVFFLCALYLWYSTTVVRVEEGCGMATVDDIAAAVHHVLCIIDAEAASQMLLAGEASG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_04G0475200 | OsZS97_04T0475200.2 | Chr04 | 31547961 | 31551537 | + | makerRMon | ||
| CDS seq | ATGGCGCTTGACACCCTGTGCAGCGCCGGCGGCGACGTCCTCATCTACGACACGTTCAACGCCTCCGCCGCGGCGGCGGCGGCGGTTGTGCCGCCGGCGAGCTTCCTCTTCGGGAATAATAATGCCGGCGGCGCGGCGGGGACGGAGACGAGGGTGCAGGTGGCGGCCGGGGCGGTGCCGGAGGTGGACCAGCTGCTGAAGCAGGCTCAGCAGCCGGGGAGGAGGAAGCGGCGGCGGCGGGCGAGGAGCTGCAAGAGCCGGGAGGACGCCGAGAGCCAGCGGATGACCCACATTGCCGTCGAGCGCAACCGCCGCCGCCAGATGAACGAGTACCTCGCCGTGCTCCGGTCGCTCATGCCGGAGTCCTACGTCCACCGGGGCGACCAGGCGTCCATTGTCGGCGGCGCCATTGATTTCGTGAAGGAGCTCGAGCAGCTGCTGCAATCCCTCGAGGCGCAGAAGCGCACGCTGCTGATGCAGCCGCCGCCGCCACCGCAGCAGCAGCGGGAGCCCAAGTGTGATGCCGCGGACTCCACGAGCGCGGCCGATCAGGAGACTCCGGCGGCGGCGGCGGCGGATGGACCGCCGTTCGCGCGGTTCTTCACGTACCCGCAGTACGTGTGGTGCCACAACCCGGCGCAGGACGGCGGCGGGGGCGGGGGCGCGGCGGCGGAGAACCGCGCCGGAGTGGCGGACATCGAGGTGAGCCTTGTGGAGACGCACGCCAGCATCCGGGTGATGGCGGCGCGGCGGCCGGGGCAGCTGCTCAAGATGGTCGCCGGCCTGCAGGCGCTCCGGCTCACCGTCCTCCACCTCAACGTCACGGCCCTCGGCTCGCTTGCCCTCTACTCCATCAGCGTCAAGGTGGAGGAAGGGTGCGGCATGGCGACGGTGGACGACATCGCAGCGGCGGTGCACCACGTGCTCTGCATCATCGACGCCGAGGCGGCGTCGCAGATGCTGCTCGCCGGGGAGGCCTCCGGTTAG
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| Protein seq | MALDTLCSAGGDVLIYDTFNASAAAAAAVVPPASFLFGNNNAGGAAGTETRVQVAAGAVPEVDQLLKQAQQPGRRKRRRRARSCKSREDAESQRMTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQLLQSLEAQKRTLLMQPPPPPQQQREPKCDAADSTSAADQETPAAAAADGPPFARFFTYPQYVWCHNPAQDGGGGGGAAAENRAGVADIEVSLVETHASIRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLALYSISVKVEEGCGMATVDDIAAAVHHVLCIIDAEAASQMLLAGEASG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.4767465 | 0.0508105 | 9.537774 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0590800 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g50090 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0590800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0024830 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0025570 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0025250 | RBH | 0.0 | 0.0 | 0.358989 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0025020 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0025240 | RBH | 0.0 | 0.0 | 0.773955 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0472000 | RBH | 0.8895915 | 0.2056075 | 1.3143185 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0024020 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0488900 | RBH | 4.379794 | 0.0894745 | 10.7906105 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0024490 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0024310 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0024400 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0024840 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0025010 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G024260 | RBH | 0.0 | 0.0 | 0.183007 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0024150 | RBH | 0.0 | 0.0 | 0.000000 |
