Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_04G0450300		OGI:04084500 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr04:29914237-29917483		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		OsbHLH075
DNA seq		ATAATATGAAACGGAGGAAGTACATATTAGTGGGATCCACATGTTAGGGCAAGTACTATAATAGATATGATTGCTACCTCCAAAATTATTTATGGCATTCACCAATAAATTAAGATGTAAGATATATAACAGGTCACCCCTAATACACAAATATCAATGCCTTTAGTAATCTCACTTCTTTCTTGGAGTTTGTGGAGGCTACCTTTTGATTTAGGGATGGTTCATCATATCTCTCCTCACTTCTCTCTCCACCTCATCACCCAATCCTATGTGTCATTTTTAGGGACAGCACATGAAGCATTATAGCACTTGCCCTTAGTCATATATAGAAAAAAAATAAAGCATCATTTTCTCCTCTCTCTCTCTCTCTCTCTCCCTCTCTATCGCTTCTCTTTTTTAATGTTAATTTTATTTTTTAAGAAATAAAAAACATCTTTTCTAATCTCTACTAATTTATATATTTTTTCTATATGACTATCATATAGTTCCACTACATGGTGGCGTTATATTTTTTTTTCTATATGACTGTCATGTAGTTCCACTATATGGATGTACCACCGTGGCATGCCACATCAATACATGGAGTGAGATGGGATCCATTTGGACATATATGACACGCAGTACAAGTTCAAAAACCTAAAATACATTTTAAGAGTTTAGGGACCTAGATATGACACTCTCGTAAGTTTAGAGACCGCCTATACACTTCACTCTTTTTATTCGTTCTAGGCTACAAGCTCAGCAACACATATAACATGGGGACTGAAAAACATAGAGTAAGTAAACAGTAAATCTTCCCAACGTAGCCGTTGCACGGGCAGTAAGTGAGACAAGGCTGTGAGCTGTCTAATGTGTATGGGGCTCATCGGTAAAAGTAGTTCCTGTACGCCGGAGCCCAGCACTCCGGCAGGATGCTATCACAGTATTCTTGAGAGGTCCAGGAAACAGGGACCAAGCAAAGCCCTCTGCCCCTCAAATCATGCTCCAGACCTGCCTTCCTCTTCCCTTCCCCTCCCCAGTGAATATGACCCTGAAGAAAAGATGGTGGTAAATGTATATGCTCCGTCATTCAGTCCTGGCCTCGCTGTGCTTTTAGAATTTGCAATACATCGTTTTAATAGGAAAAACTACCTTGTTTGTGCTGTTTGTCATATACGGTTGGCTGAATAACTGCACCAAATCAGAAAAATAGAAGGGTTATTCGTCAGCTTATCTCTGTGGGAGCATGACTTATTAGGTTCAGAAAAGGTTGGCAAATCAGTAATAGTTGTGCCAGTACAAATGTACTTTCTTTATGTTCTTTAGTGTCACGAAAACGACATACTAAACTTGGACATGACTTGGAGGTCCACTGGCAAAAGGCACAAAGCAAGAGGTCAATATACCAAATGCCCAAATGCGTAATCTGAAATAAGGCAAAAGGTTGAAGTAGTCGGTGCAACGATGAACGATCCATATATCTCGATACAGTGAATCGCTCAGCTGCAGTGCTCATGGCAGTATCTTCTACTCCGTACTACTTTATAGAAACTTCGATCTGAGACAAAACACACAGGGGGCATGTGCAAAACAGCAAAAAAGGATTGTGCTGATGGTGTCACCTGTATTTGTTCATGAAGAAATTTGATGTAGGTTATGGTTTCCAACAGAACAGACGCTGTATCCGTCTGTTAAAATGAAATATGTAATGATTAACGGCCAAAATTGAAGAAGAGAAAATACTTTTGCTTCTTACATTAGTTTGGAAGCATAAAGTGTGCGTTTAATGATCTCATACGGTCATACCTTCCCGAAAGGTGACACAATCTGCTGCAAAGCCGTGATCTTCTCCCCCAGCTTCACTTTGGGTGATTGATGCTGCGTGTGGTTTCGAAACAAGTTCTTCAAATGCCAACTCCTCAGAACGATTTGCAAAGTCAATCCACTATTCTGTCATTGTTAGTTACCTTGGGAGAAGATGTACTATGTGAAGTTTCTGACTTGAACTTCTTCGCTTTGCCTCCTCTTACCTCTGATAGTTTCTTCTTGTTACGATCACTTCCACTGCTACTACAAGATCTTGCCTGCAAGAATTGTACATGTAAGGTTTTTTCACACCGGCTTCTACTTATTTGAGGATACATTACAATTGTTCAGTCTTACCAGCCGTGTAATTTCTTGCTCCCTTGTGTCTGTAGACATCAATTCTTCTGCGGTTGCTGACCTGTGGCCACTGAAAGAGCTGACGTCCGGAGAAGTTCTCATGCAAAACGAAGCCTCCAGTCCTGAGCCGTCCAGACAAACTCCCCCAAACCCTATACCAGACTGATCGAGAACACTAGTGGGAATCAGTTGCTGCAGAAATGCGGCCATGGGAGATCCAACCTCCTGCTGCTGGATGCTCCGTTGCACCACAGCGCTGTTCTTCCCCAGCTGGTACGCCAGCAGCGGCGAGCTAGCGATGCCATGCTCGATTGAACTAACACCAGCGTGCTGGCCGTTGTTGTCCAGGCTATAGGCGGCGACAGCTGATGCGGCCATGCCGTCGCTGTCCATCCCCTTGAGGTAGTCGCATGCCACGGGGACGCCCTCGAACACTTCGGGAGCCATCACGTAGTCTCTCGTGTTGTCAAGCAAAGAAACGAGGCTCTCCCTGAAGCTGTCGTCGTTGCTCCCATGCTCTTCTTCCCTGCTACTGAAAACATGCATTGCACGTCTCGTCTGACTTGTCAATTGTAACTTAACTGAATAATAATAATACGAGAATCAAAGTGTTGTTTAGATGTGCATATACTCACAGGACGCTCTGGTTCCAGAGGTGACCGCCTGGGTGCTCGTTGGGGAGGCGCTCGTCGGCCGCCGGCGACGATGAGAAGGCTGTGTCACGGGCGACGGCAAAGAGTGCATGCATCTGTATGATCCGATGAGTTTCCCCGCACGCCGCGGCTGGTTGGTGAAGTGGAGGAGAAGCTGCAGCGACCAGCCCGTGGCTCCGGGTGCTTCTCGGGTTATGAAATATACGACGATATGCAGCTGGGTGCAGTGCACACCCGTGCATGCGTGTATCCTATATTCCTATGGTGGTGGACCAAAATCGAAGTGGCCATTTTTGTAGACGGTGGTGGGGGTTTCTGATCGGGGATGATATGCCTGCGTCGGCATGACGTGAGCACTTTGAGATGTTTCAGTTTCTCGGTAGAAACCTAAATTTTGGTACAAACTAAACCCAACTGGACTATATACCAAGCTCTTAATCGCGCCAGAAAAT More
CDS seq		ATGCACGGGTGTGCACTGCACCCAGCTGCATATCGTCGTATATTTCATAACCCGAGAAGCACCCGGAGCCACGGGCTGGTCGCTGCAGCTTCTCCTCCACTTCACCAACCAGCCGCGGCGTGCGGGGAAACTCATCGGATCATACAGATGCATGCACTCTTTGCCGTCGCCCGTGACACAGCCTTCTCATCGTCGCCGGCGGCCGACGAGCGCCTCCCCAACGAGCACCCAGGCGGTCACCTCTGGAACCAGAGCGTCCTTAGCAGGGAAGAAGAGCATGGGAGCAACGACGACAGCTTCAGGGAGAGCCTCGTTTCTTTGCTTGACAACACGAGAGACTACGTGATGGCTCCCGAAGTGTTCGAGGGCGTCCCCGTGGCATGCGACTACCTCAAGGGGATGGACAGCGACGGCATGGCCGCATCAGCTGTCGCCGCCTATAGCCTGGACAACAACGGCCAGCACGCTGGTGTTAGTTCAATCGAGCATGGCATCGCTAGCTCGCCGCTGCTGGCGTACCAGCTGGGGAAGAACAGCGCTGTGGTGCAACGGAGCATCCAGCAGCAGGAGGTTGGATCTCCCATGGCCGCATTTCTGCAGCAACTGATTCCCACTAGTGTTCTCGATCAGTCTGGTATAGGGTTTGGGGGAGTTTGTCTGGACGGCTCAGGACTGGAGGCTTCGTTTTGCATGAGAACTTCTCCGGACGTCAGCTCTTTCAGTGGCCACAGGTCAGCAACCGCAGAAGAATTGATGTCTACAGACACAAGGGAGCAAGAAATTACACGGCTGGCAAGATCTTGTAGTAGCAGTGGAAGTGATCGTAACAAGAAGAAACTATCAGAGGTAAGAGGAGGCAAAGCGAAGAAGTTCAAGTCAGAAACTTCACATAGTACATCTTCTCCCAAGCATCAATCACCCAAAGTGAAGCTGGGGGAGAAGATCACGGCTTTGCAGCAGATTGTGTCACCTTTCGGGAAGACGGATACAGCGTCTGTTCTGTTGGAAACCATAACCTACATCAAATTTCTTCATGAACAAATACAGTTATTCAGCCAACCGTATATGACAAACAGCACAAACAAGGGTCATATTCACTGGGGAGGGGAAGGGAAGAGGAAGGCAGGTCTGGAGCATGATTTGAGGGGCAGAGGGCTTTGCTTGGTCCCTGTTTCCTGGACCTCTCAAGAATACTGTGATAGCATCCTGCCGGAGTGCTGGGCTCCGGCGTACAGGAACTACTTTTACCGATGA More
Protein seq		MHGCALHPAAYRRIFHNPRSTRSHGLVAAASPPLHQPAAACGETHRIIQMHALFAVARDTAFSSSPAADERLPNEHPGGHLWNQSVLSREEEHGSNDDSFRESLVSLLDNTRDYVMAPEVFEGVPVACDYLKGMDSDGMAASAVAAYSLDNNGQHAGVSSIEHGIASSPLLAYQLGKNSAVVQRSIQQQEVGSPMAAFLQQLIPTSVLDQSGIGFGGVCLDGSGLEASFCMRTSPDVSSFSGHRSATAEELMSTDTREQEITRLARSCSSSGSDRNKKKLSEVRGGKAKKFKSETSHSTSSPKHQSPKVKLGEKITALQQIVSPFGKTDTASVLLETITYIKFLHEQIQLFSQPYMTNSTNKGHIHWGGEGKRKAGLEHDLRGRGLCLVPVSWTSQEYCDSILPECWAPAYRNYFYR
Function		Transcription factor bHLH111 [UniProtKB/Swiss-Prot:Q9FYJ6]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_04G0450300	OsZS97_04T0450300.1	Chr04	29914814	29917273	-	makerRMon
CDS seq	ATGCACGGGTGTGCACTGCACCCAGCTGCATATCGTCGTATATTTCATAACCCGAGAAGCACCCGGAGCCACGGGCTGGTCGCTGCAGCTTCTCCTCCACTTCACCAACCAGCCGCGGCGTGCGGGGAAACTCATCGGATCATACAGATGCATGCACTCTTTGCCGTCGCCCGTGACACAGCCTTCTCATCGTCGCCGGCGGCCGACGAGCGCCTCCCCAACGAGCACCCAGGCGGTCACCTCTGGAACCAGAGCGTCCTTAGCAGGGAAGAAGAGCATGGGAGCAACGACGACAGCTTCAGGGAGAGCCTCGTTTCTTTGCTTGACAACACGAGAGACTACGTGATGGCTCCCGAAGTGTTCGAGGGCGTCCCCGTGGCATGCGACTACCTCAAGGGGATGGACAGCGACGGCATGGCCGCATCAGCTGTCGCCGCCTATAGCCTGGACAACAACGGCCAGCACGCTGGTGTTAGTTCAATCGAGCATGGCATCGCTAGCTCGCCGCTGCTGGCGTACCAGCTGGGGAAGAACAGCGCTGTGGTGCAACGGAGCATCCAGCAGCAGGAGGTTGGATCTCCCATGGCCGCATTTCTGCAGCAACTGATTCCCACTAGTGTTCTCGATCAGTCTGGTATAGGGTTTGGGGGAGTTTGTCTGGACGGCTCAGGACTGGAGGCTTCGTTTTGCATGAGAACTTCTCCGGACGTCAGCTCTTTCAGTGGCCACAGGTCAGCAACCGCAGAAGAATTGATGTCTACAGACACAAGGGAGCAAGAAATTACACGGCTGGCAAGATCTTGTAGTAGCAGTGGAAGTGATCGTAACAAGAAGAAACTATCAGAGGTAAGAGGAGGCAAAGCGAAGAAGTTCAAGTCAGAAACTTCACATAGTACATCTTCTCCCAAGCATCAATCACCCAAAGTGAAGCTGGGGGAGAAGATCACGGCTTTGCAGCAGATTGTGTCACCTTTCGGGAAGACGGATACAGCGTCTGTTCTGTTGGAAACCATAACCTACATCAAATTTCTTCATGAACAAATACAGTTATTCAGCCAACCGTATATGACAAACAGCACAAACAAGGGTCATATTCACTGGGGAGGGGAAGGGAAGAGGAAGGCAGGTCTGGAGCATGATTTGAGGGGCAGAGGGCTTTGCTTGGTCCCTGTTTCCTGGACCTCTCAAGAATACTGTGATAGCATCCTGCCGGAGTGCTGGGCTCCGGCGTACAGGAACTACTTTTACCGATGA More
Protein seq	MHGCALHPAAYRRIFHNPRSTRSHGLVAAASPPLHQPAAACGETHRIIQMHALFAVARDTAFSSSPAADERLPNEHPGGHLWNQSVLSREEEHGSNDDSFRESLVSLLDNTRDYVMAPEVFEGVPVACDYLKGMDSDGMAASAVAAYSLDNNGQHAGVSSIEHGIASSPLLAYQLGKNSAVVQRSIQQQEVGSPMAAFLQQLIPTSVLDQSGIGFGGVCLDGSGLEASFCMRTSPDVSSFSGHRSATAEELMSTDTREQEITRLARSCSSSGSDRNKKKLSEVRGGKAKKFKSETSHSTSSPKHQSPKVKLGEKITALQQIVSPFGKTDTASVLLETITYIKFLHEQIQLFSQPYMTNSTNKGHIHWGGEGKRKAGLEHDLRGRGLCLVPVSWTSQEYCDSILPECWAPAYRNYFYR More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_04G0450300	OsZS97_04T0450300.2	Chr04	29914237	29917483	-	makerRMon
CDS seq	ATGCACGGGTGTGCACTGCACCCAGCTGCATATCGTCGTATATTTCATAACCCGAGAAGCACCCGGAGCCACGGGCTGGTCGCTGCAGCTTCTCCTCCACTTCACCAACCAGCCGCGGCGTGCGGGGAAACTCATCGGATCATACAGATGCATGCACTCTTTGCCGTCGCCCGTGACACAGCCTTCTCATCGTCGCCGGCGGCCGACGAGCGCCTCCCCAACGAGCACCCAGGCGGTCACCTCTGGAACCAGAGCGTCCTTAGCAGGGAAGAAGAGCATGGGAGCAACGACGACAGCTTCAGGGAGAGCCTCGTTTCTTTGCTTGACAACACGAGAGACTACGTGATGGCTCCCGAAGTGTTCGAGGGCGTCCCCGTGGCATGCGACTACCTCAAGGGGATGGACAGCGACGGCATGGCCGCATCAGCTGTCGCCGCCTATAGCCTGGACAACAACGGCCAGCACGCTGGTGTTAGTTCAATCGAGCATGGCATCGCTAGCTCGCCGCTGCTGGCGTACCAGCTGGGGAAGAACAGCGCTGTGGTGCAACGGAGCATCCAGCAGCAGGAGGTTGGATCTCCCATGGCCGCATTTCTGCAGCAACTGATTCCCACTAGTGTTCTCGATCAGTCTGGTATAGGGTTTGGGGGAGTTTGTCTGGACGGCTCAGGACTGGAGGCTTCGTTTTGCATGAGAACTTCTCCGGACGTCAGCTCTTTCAGTGGCCACAGGTCAGCAACCGCAGAAGAATTGATGTCTACAGACACAAGGGAGCAAGAAATTACACGGCTGGCAAGATCTTGTAGTAGCAGTGGAAGTGATCGTAACAAGAAGAAACTATCAGAGGTAAGAGGAGGCAAAGCGAAGAAGTTCAAGTCAGAAACTTCACATAGTACATCTTCTCCCAAGCATCAATCACCCAAAGTGAAGCTGGGGGAGAAGATCACGGCTTTGCAGCAGATTGTGTCACCTTTCGGGAAGACGGATACAGCGTCTGTTCTGTTGGAAACCATAACCTACATCAAATTTCTTCATGAACAAATACAGTTATTCAGCCAACCGTATATGACAAACAGCACAAACAAGGTAGTTTTTCCTATTAAAACGATGTATTGCAAATTCTAA More
Protein seq	MHGCALHPAAYRRIFHNPRSTRSHGLVAAASPPLHQPAAACGETHRIIQMHALFAVARDTAFSSSPAADERLPNEHPGGHLWNQSVLSREEEHGSNDDSFRESLVSLLDNTRDYVMAPEVFEGVPVACDYLKGMDSDGMAASAVAAYSLDNNGQHAGVSSIEHGIASSPLLAYQLGKNSAVVQRSIQQQEVGSPMAAFLQQLIPTSVLDQSGIGFGGVCLDGSGLEASFCMRTSPDVSSFSGHRSATAEELMSTDTREQEITRLARSCSSSGSDRNKKKLSEVRGGKAKKFKSETSHSTSSPKHQSPKVKLGEKITALQQIVSPFGKTDTASVLLETITYIKFLHEQIQLFSQPYMTNSTNKVVFPIKTMYCKF More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_04G0450300	OsZS97_04T0450300.3	Chr04	29914237	29917483	-	makerRMon
CDS seq	ATGCACGGGTGTGCACTGCACCCAGCTGCATATCGTCGTATATTTCATAACCCGAGAAGCACCCGGAGCCACGGGCTGGTCGCTGCAGCTTCTCCTCCACTTCACCAACCAGCCGCGGCGTGCGGGGAAACTCATCGGATCATACAGATGCATGCACTCTTTGCCGTCGCCCGTGACACAGCCTTCTCATCGTCGCCGGCGGCCGACGAGCGCCTCCCCAACGAGCACCCAGGCGGTCACCTCTGGAACCAGAGCGTCCTTAGCAGGGAAGAAGAGCATGGGAGCAACGACGACAGCTTCAGGGAGAGCCTCGTTTCTTTGCTTGACAACACGAGAGACTACGTGATGGCTCCCGAAGTGTTCGAGGGCGTCCCCGTGGCATGCGACTACCTCAAGGGGATGGACAGCGACGGCATGGCCGCATCAGCTGTCGCCGCCTATAGCCTGGACAACAACGGCCAGCACGCTGGTGTTAGTTCAATCGAGCATGGCATCGCTAGCTCGCCGCTGCTGGCGTACCAGCTGGGGAAGAACAGCGCTGTGGTGCAACGGAGCATCCAGCAGCAGGAGGTTGGATCTCCCATGGCCGCATTTCTGCAGCAACTGATTCCCACTAGTGTTCTCGATCAGTCTGGTATAGGGTTTGGGGGAGTTTGTCTGGACGGCTCAGGACTGGAGGCTTCGTTTTGCATGAGAACTTCTCCGGACGTCAGCTCTTTCAGTGGCCACAGGTCAGCAACCGCAGAAGAATTGATGTCTACAGACACAAGGGAGCAAGAAATTACACGGCTGGCAAGATCTTGTAGTAGCAGTGGAAGTGATCGTAACAAGAAGAAACTATCAGAGGTAAGAGGAGGCAAAGCGAAGAAGTTCAAGTCAGAAACTTCACATAGTACATCTTCTCCCAAGGTAACTAACAATGACAGAATAGTGGATTGA More
Protein seq	MHGCALHPAAYRRIFHNPRSTRSHGLVAAASPPLHQPAAACGETHRIIQMHALFAVARDTAFSSSPAADERLPNEHPGGHLWNQSVLSREEEHGSNDDSFRESLVSLLDNTRDYVMAPEVFEGVPVACDYLKGMDSDGMAASAVAAYSLDNNGQHAGVSSIEHGIASSPLLAYQLGKNSAVVQRSIQQQEVGSPMAAFLQQLIPTSVLDQSGIGFGGVCLDGSGLEASFCMRTSPDVSSFSGHRSATAEELMSTDTREQEITRLARSCSSSGSDRNKKKLSEVRGGKAKKFKSETSHSTSSPKVTNNDRIVD More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_04G0450300	OsZS97_04T0450300.4	Chr04	29915995	29917273	-	makerRMon
CDS seq	ATGCACGGGTGTGCACTGCACCCAGCTGCATATCGTCGTATATTTCATAACCCGAGAAGCACCCGGAGCCACGGGCTGGTCGCTGCAGCTTCTCCTCCACTTCACCAACCAGCCGCGGCGTGCGGGGAAACTCATCGGATCATACAGATGCATGCACTCTTTGCCGTCGCCCGTGACACAGCCTTCTCATCGTCGCCGGCGGCCGACGAGCGCCTCCCCAACGAGCACCCAGGCGGTCACCTCTGGAACCAGAGCGTCCTTAGCAGGGAAGAAGAGCATGGGAGCAACGACGACAGCTTCAGGGAGAGCCTCGTTTCTTTGCTTGACAACACGAGAGACTACGTGATGGCTCCCGAAGTGTTCGAGGGCGTCCCCGTGGCATGCGACTACCTCAAGGGGATGGACAGCGACGGCATGGCCGCATCAGCTGTCGCCGCCTATAGCCTGGACAACAACGGCCAGCACGCTGGTGTTAGTTCAATCGAGCATGGCATCGCTAGCTCGCCGCTGCTGGCGTACCAGCTGGGGAAGAACAGCGCTGTGGTGCAACGGAGCATCCAGCAGCAGGAGGTTGGATCTCCCATGGCCGCATTTCTGCAGCAACTGATTCCCACTAGTGTTCTCGATCAGTCTGGTATAGGGTTTGGGGGAGTTTGTCTGGACGGCTCAGGACTGGAGGCTTCGTTTTGCATGAGAACTTCTCCGGACGTCAGCTCTTTCAGTGGCCACAGGTCAGCAACCGCAGAAGAATTGATGTCTACAGACACAAGGGAGCAAGAAATTACACGGCTGGCAAGATCTTGTAGTAGCAGTGGAAGTGATCGTAACAAGAAGAAACTATCAGAGGTAAGAGGAGGCAAAGCGAAGAAGTTCAAGTCAGAAACTTCACATAGTACATCTTCTCCCAAGCATCAATCACCCAAAGTGAAGCTGGGGGAGAAGATCACGGCTTTGCAGCAGATTGTGTCACCTTTCGGGAAGGTATGA More
Protein seq	MHGCALHPAAYRRIFHNPRSTRSHGLVAAASPPLHQPAAACGETHRIIQMHALFAVARDTAFSSSPAADERLPNEHPGGHLWNQSVLSREEEHGSNDDSFRESLVSLLDNTRDYVMAPEVFEGVPVACDYLKGMDSDGMAASAVAAYSLDNNGQHAGVSSIEHGIASSPLLAYQLGKNSAVVQRSIQQQEVGSPMAAFLQQLIPTSVLDQSGIGFGGVCLDGSGLEASFCMRTSPDVSSFSGHRSATAEELMSTDTREQEITRLARSCSSSGSDRNKKKLSEVRGGKAKKFKSETSHSTSSPKHQSPKVKLGEKITALQQIVSPFGKV More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.0878835	13.390713	0.2525515

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0565900	RBH	0.0	0.160703	0.000000
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g47810	RBH	0.0	0.107810	0.000000
Nipponbare \| IRGSP 1.0 \| RAP-db	Os04g0565900	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0023230	RBH	0.000000	27.208097	0.149154
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0023970	RBH	0.0	2.150577	0.0
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0023690	RBH	0.0	7.898371	0.844313
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0023450	RBH	0.0	0.220811	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0023570	RBH	0.000000	14.325855	4.172019
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_04G0446600	RBH	0.0844385	21.3970575	0.348171
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0022370	RBH	0.0	0.790305	0.078003
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_02G0470800	RBH	1.394855	13.1684665	0.4994925
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0022880	RBH	0.000000	0.480799	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_04g0022710	RBH	0.0	10.157200	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_04g0022830	RBH	0.0	19.924377	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_04g0023230	RBH	0.0	0.616262	0.000000
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0023420	RBH	0.0	5.948256	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_04G022650	RBH	0.000000	0.000000	0.490358
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0022530	RBH	0.701844	79.430473	3.377867

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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