Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_04G0282400 | OGI:04058620 | 2/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr04:19212534-19215542 | ||||||||
| Gene Symbol | RLCK146, OsRLCK146 | ||||||||||
| DNA seq | TCATCTAGAGAATTCTGTGCTCAACACGGCCTTATTCTCCAGGCTGTAAACCCCGCTGGTCCTGCTCTCGTCGTACCAAATGGATACTGTGCTTCCCATATCCATAAAGCTCATCCCCTCAAGCACAAATGGTGGTTGTGGGCATTGATGCACTTCATCTGCTAGCGCAAGATACTTGAGCTCCTCTGCTACCAGAGCCATTGTTGGTCTTGCCATACCCGGAACAACCAAACATTGACTTGCCAACACTGCAGCCCGATGGATCACTCTCATGCAAGCTTCATCAACTATGTCACTATCAAGGAGCTCACGGACTGTGCCATCTGCCATAGCCTCCAGAAACAATGAGGTCAAGCTCTTCCTTTCTTTTGACAATGGCTTCATACCAGTTAGAAGCTCAACAAGAATAACTCCGAAGCTATATATGTCATTCTTGGCTGTGAGCTCGTACTCAAGTAGGTAGTCTGGGTCAATATACCCTGGTGTGCCTTTGGGCACAGCCTGAGTATTCTCATCAATTGTTGAGCAACCAAAGTCAGACACCTTTGCGACCAATCCCTCGGCAAGTAGGATGTTGGCTGGCTTTACGTCACCATGGAGTACAGGGTGTGGTAGAGAGTGGAGATGTGCAAGTGCGCCGGCTGATTCCGCGGCAATCCTCAGGCGGGTTCCTAGTGTGACATAGAACCTCCTGCTCCTTTGCAGATCCATCAGCTCTTGCAGTGTTTTGTTCTGCACAAACTCGTACACAAGTATGGGTGCCTCAAACTGGAGGCAACAACCGAGTAACTTGACAATGTTAGGATGGTTGACACGGCAAAGTATGACTAGTTCCTGCACGAATTCCATCTTCCTGCTCTCGTCAATCTCCTTGCACATTTTAATTGCGACGGCAACTCCGCCTAACACTGCCCTGTAAACGGTTCCCTGCCCTCCTTCCCCAACGATGTGCGCCTTGTTGAAGTTATTCGTGGCAGTCTCGATCTCCTGTCTGTCATAGAGGTTGAACCCAGCATTGCCCTCAACTTTCATCATTTCTAGAAGTAGCTGGCCTCCGTGCTGTTGAAAAAATTCATCTGTCTGTCTTAAGAGAGCTTGTTTTTTCATGCTCCTTTTATGGCGTATCACTTCCCACCCAAGGAATCCAAATAGGCCGGCTAATACACAGACAACATTTCCTGCATAAACAAATATTTGACATTAGTGTCAAATATTTGAGTAAGTGTGTTAAAATCAGAGTTTTAACATCGATGTACATGAACAGTTCACGACCAGATCCGGAACAGTGAAACATGTGCCTACCAATTCCCAGCCGTGCTTTTAGCGGTAAAAAGTCTTTTCGGCATCCTCCTGGAATAGTGGCATTTCCTTTGCTGCCCGCTTGACAGGTACAATCAAAATCGCCAGGTTTATTACGACATTTTCCATAGCAAGGGTAAGTCTTCGAATATAGACATTCATCAATATCTAAAAAACAAAAGACATTTTGAAAAGGTATACCATTACTTCTCGAAATATTGTAATCAACAAATAATAAAGAACGGAAAATTGTGGAAAGGAGAAGCTAATCAGAAAAATAAATAATGGGGCATAAGATATAGAAAAAAGAATTTGGTGATCTGGAAAAATTGGAAAAACAGGAAAATTTCAAATATGAAATGGGGAAAAAGTCAAAATCATAAACGAACATTACATTGGAAATCAGGGAAAAGGGTGAGAAACCTTATTTTATTTAAATTTCTGAAGGAATAAGTTTAGTTGGTTATAAATTAACCACCTAAACTTATTCCTGAAAAAAGTAGCCTGGATGAAGAAGAAAACAAATCATGAAACGTTTAAGACTATGTCGTATGAATTGTCACAACTTTAAAATTCTGAATATGGTATGATGGGACAATAAGAAAGTTCACCTCGACAGCCGTTGCTACCTTGGAGGTAAGGATTGCCTTCGTACCCTTTGGAGCAGTTGCAGATGTAGCCTGATCCGTTGGTTGAGTTGAAGCACTCACTATTAGTGCTTTTGCACGCGTAAGAGTCATTCTTCTTCTGTGCCTCCTCACAGGTGTTGGCGCTCCGGATAGCCCAATCAAGCACCATAGGCGCCTGGCCATCGTTGGTGGAGTTAAATTCCAATGAAGTCAAGTAGGTGGTTGAGAAGGTGAAGTTGGAGGAGTCCATTAGCACCGCGTAGCTGCAGGGTGTGCGGTTGTAGATCCCCGACGTGTTCATGCTGCTAAAATCGAAGAACACCTGGTAGTAATCCAGGCCCTTTGGGATGGCTGTCTGGCAGCAGCCTATCCCAGAGCAGATGCCGTTCGTCGCCTTCGACACATCACCTCGCCGACAGCCTGACACACAGCCGCTCATGTACTTCCCCACGTAATCCTGGTTGGCGATGTAGGCTAGTGTCCGGCAGCCAACGACGGTGAACTTGTTGGAGTCGGAGAGCATGAAAGGCGTATCAGTCAGGTTGAGAAACCACTCAGTGGAGTTCATGCCTTTGGAGATCGCGTCGTAGCAGGAAGAGGATATGTGGTTGTTTACACGGGCTTGACCATGCTGGATATCGATGCCAAGGAGCTCGACATCTCCATAGAAGGGCTTGTAGACGCCGTTCCCGGTGTCGGTGCAGTCGACATCGAAGCCAGACCCCATTGCGCAGCTCTCAGTTGAGATGCCAAACGGGCAAGGGATGTCAACGCCACCACACGTGGTGTTCTTGCACAGCGCCGTTTCCCCAGCGGCGAAGGGCGCAGCCAGGGCCGTGCTGAGCAGTAGCATCAATAGCCAAATATTTTCACAAAATGCTGCGCGCATAGCAACCATAACTTCTCTGAGTGGAGCCATGGGTAGCTTAATGATCGAGCTGTGTGTTTCTTGGTCGAGCACACCTGCGCAATCGCAGTTCCACGAGGAACGGAGGAATCGATCGTATATAAAGACAGAGAGAGCAGTACTAACTTTTAGCACTCCCTCCGTCACATAATACAAAAGATTTTGAAGATACAT
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| CDS seq | ATGTATCTTCAAAATCTTTTGTATTATGTGACGGAGGGAGTGCTAAAAGTTAGTACTGCTCTCTCTGTCTTTATATACGATCGATTCCTCCGTTCCTCGTGGAACTGCGATTGCGCAGGTGTGCTCGACCAAGAAACACACAGCTCGATCATTAAGCTACCCATGGCTCCACTCAGAGAAGTTATGGTTGCTATGCGCGCAGCATTTTGTGAAAATATTTGGCTATTGATGCTACTGCTCAGCACGGCCCTGGCTGCGCCCTTCGCCGCTGGGGAAACGGCGCTGTGCAAGAACACCACGTGTGGTGGCGTTGACATCCCTTGCCCGTTTGGCATCTCAACTGAGAGCTGCGCAATGGGGTCTGGCTTCGATGTCGACTGCACCGACACCGGGAACGGCGTCTACAAGCCCTTCTATGGAGATGTCGAGCTCCTTGGCATCGATATCCAGCATGGTCAAGCCCGTGTAAACAACCACATATCCTCTTCCTGCTACGACGCGATCTCCAAAGGCATGAACTCCACTGAGTGGTTTCTCAACCTGACTGATACGCCTTTCATGCTCTCCGACTCCAACAAGTTCACCGTCGTTGGCTGCCGGACACTAGCCTACATCGCCAACCAGGATTACGTGGGGAAGTACATGAGCGGCTGTGTGTCAGGCTGTCGGCGAGGTGATGTGTCGAAGGCGACGAACGGCATCTGCTCTGGGATAGGCTGCTGCCAGACAGCCATCCCAAAGGGCCTGGATTACTACCAGGTGTTCTTCGATTTTAGCAGCATGAACACGTCGGGGATCTACAACCGCACACCCTGCAGCTACGCGGTGCTAATGGACTCCTCCAACTTCACCTTCTCAACCACCTACTTGACTTCATTGGAATTTAACTCCACCAACGATGGCCAGGCGCCTATGGTGCTTGATTGGGCTATCCGGAGCGCCAACACCTGTGAGGAGGCACAGAAGAAGAATGACTCTTACGCGTGCAAAAGCACTAATAGTGAGTGCTTCAACTCAACCAACGGATCAGGCTACATCTGCAACTGCTCCAAAGGGTACGAAGGCAATCCTTACCTCCAAGGTAGCAACGGCTGTCGAGATATTGATGAATGTCTATATTCGAAGACTTACCCTTGCTATGGAAAATGTCGTAATAAACCTGGCGATTTTGATTGTACCTGTCAAGCGGGCAGCAAAGGAAATGCCACTATTCCAGGAGGATGCCGAAAAGACTTTTTACCGCTAAAAGCACGGCTGGGAATTGGAAATGTTGTCTGTGTATTAGCCGGCCTATTTGGATTCCTTGGGTGGGAAGTGATACGCCATAAAAGGAGCATGAAAAAACAAGCTCTCTTAAGACAGACAGATGAATTTTTTCAACAGCACGGAGGCCAGCTACTTCTAGAAATGATGAAAGTTGAGGGCAATGCTGGGTTCAACCTCTATGACAGACAGGAGATCGAGACTGCCACGAATAACTTCAACAAGGCGCACATCGTTGGGGAAGGAGGGCAGGGAACCGTTTACAGGGCAGTGTTAGGCGGAGTTGCCGTCGCAATTAAAATGTGCAAGGAGATTGACGAGAGCAGGAAGATGGAATTCGTGCAGGAACTAGTCATACTTTGCCGTGTCAACCATCCTAACATTGTCAAGTTACTCGGTTGTTGCCTCCAGTTTGAGGCACCCATACTTGTGTACGAGTTTGTGCAGAACAAAACACTGCAAGAGCTGATGGATCTGCAAAGGAGCAGGAGGTTCTATGTCACACTAGGAACCCGCCTGAGGATTGCCGCGGAATCAGCCGGCGCACTTGCACATCTCCACTCTCTACCACACCCTGTACTCCATGGTGACGTAAAGCCAGCCAACATCCTACTTGCCGAGGGATTGGTCGCAAAGGTGTCTGACTTTGGTTGCTCAACAATTGATGAGAATACTCAGGCTGTGCCCAAAGGCACACCAGGGTATATTGACCCAGACTACCTACTTGAGTACGAGCTCACAGCCAAGAATGACATATATAGCTTCGGAGTTATTCTTGTTGAGCTTCTAACTGGTATGAAGCCATTGTCAAAAGAAAGGAAGAGCTTGACCTCATTGTTTCTGGAGGCTATGGCAGATGGCACAGTCCGTGAGCTCCTTGATAGTGACATAGTTGATGAAGCTTGCATGAGAGTGATCCATCGGGCTGCAGTGTTGGCAAGTCAATGTTTGGTTGTTCCGGGTATGGCAAGACCAACAATGGCTCTGGTAGCAGAGGAGCTCAAGTATCTTGCGCTAGCAGATGAAGTGCATCAATGCCCACAACCACCATTTGTGCTTGAGGGGATGAGCTTTATGGATATGGGAAGCACAGTATCCATTTGGTACGACGAGAGCAGGACCAGCGGGGTTTACAGCCTGGAGAATAAGGCCGTGTTGAGCACAGAATTCTCTAGATGA
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| Protein seq | MYLQNLLYYVTEGVLKVSTALSVFIYDRFLRSSWNCDCAGVLDQETHSSIIKLPMAPLREVMVAMRAAFCENIWLLMLLLSTALAAPFAAGETALCKNTTCGGVDIPCPFGISTESCAMGSGFDVDCTDTGNGVYKPFYGDVELLGIDIQHGQARVNNHISSSCYDAISKGMNSTEWFLNLTDTPFMLSDSNKFTVVGCRTLAYIANQDYVGKYMSGCVSGCRRGDVSKATNGICSGIGCCQTAIPKGLDYYQVFFDFSSMNTSGIYNRTPCSYAVLMDSSNFTFSTTYLTSLEFNSTNDGQAPMVLDWAIRSANTCEEAQKKNDSYACKSTNSECFNSTNGSGYICNCSKGYEGNPYLQGSNGCRDIDECLYSKTYPCYGKCRNKPGDFDCTCQAGSKGNATIPGGCRKDFLPLKARLGIGNVVCVLAGLFGFLGWEVIRHKRSMKKQALLRQTDEFFQQHGGQLLLEMMKVEGNAGFNLYDRQEIETATNNFNKAHIVGEGGQGTVYRAVLGGVAVAIKMCKEIDESRKMEFVQELVILCRVNHPNIVKLLGCCLQFEAPILVYEFVQNKTLQELMDLQRSRRFYVTLGTRLRIAAESAGALAHLHSLPHPVLHGDVKPANILLAEGLVAKVSDFGCSTIDENTQAVPKGTPGYIDPDYLLEYELTAKNDIYSFGVILVELLTGMKPLSKERKSLTSLFLEAMADGTVRELLDSDIVDEACMRVIHRAAVLASQCLVVPGMARPTMALVAEELKYLALADEVHQCPQPPFVLEGMSFMDMGSTVSIWYDESRTSGVYSLENKAVLSTEFSR |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_04G0282400 | OsZS97_04T0282400.1 | Chr04 | 19212534 | 19215542 | - | makerRMon | ||
| CDS seq | ATGTATCTTCAAAATCTTTTGTATTATGTGACGGAGGGAGTGCTAAAAGTTAGTACTGCTCTCTCTGTCTTTATATACGATCGATTCCTCCGTTCCTCGTGGAACTGCGATTGCGCAGGTGTGCTCGACCAAGAAACACACAGCTCGATCATTAAGCTACCCATGGCTCCACTCAGAGAAGTTATGGTTGCTATGCGCGCAGCATTTTGTGAAAATATTTGGCTATTGATGCTACTGCTCAGCACGGCCCTGGCTGCGCCCTTCGCCGCTGGGGAAACGGCGCTGTGCAAGAACACCACGTGTGGTGGCGTTGACATCCCTTGCCCGTTTGGCATCTCAACTGAGAGCTGCGCAATGGGGTCTGGCTTCGATGTCGACTGCACCGACACCGGGAACGGCGTCTACAAGCCCTTCTATGGAGATGTCGAGCTCCTTGGCATCGATATCCAGCATGGTCAAGCCCGTGTAAACAACCACATATCCTCTTCCTGCTACGACGCGATCTCCAAAGGCATGAACTCCACTGAGTGGTTTCTCAACCTGACTGATACGCCTTTCATGCTCTCCGACTCCAACAAGTTCACCGTCGTTGGCTGCCGGACACTAGCCTACATCGCCAACCAGGATTACGTGGGGAAGTACATGAGCGGCTGTGTGTCAGGCTGTCGGCGAGGTGATGTGTCGAAGGCGACGAACGGCATCTGCTCTGGGATAGGCTGCTGCCAGACAGCCATCCCAAAGGGCCTGGATTACTACCAGGTGTTCTTCGATTTTAGCAGCATGAACACGTCGGGGATCTACAACCGCACACCCTGCAGCTACGCGGTGCTAATGGACTCCTCCAACTTCACCTTCTCAACCACCTACTTGACTTCATTGGAATTTAACTCCACCAACGATGGCCAGGCGCCTATGGTGCTTGATTGGGCTATCCGGAGCGCCAACACCTGTGAGGAGGCACAGAAGAAGAATGACTCTTACGCGTGCAAAAGCACTAATAGTGAGTGCTTCAACTCAACCAACGGATCAGGCTACATCTGCAACTGCTCCAAAGGGTACGAAGGCAATCCTTACCTCCAAGGTAGCAACGGCTGTCGAGATATTGATGAATGTCTATATTCGAAGACTTACCCTTGCTATGGAAAATGTCGTAATAAACCTGGCGATTTTGATTGTACCTGTCAAGCGGGCAGCAAAGGAAATGCCACTATTCCAGGAGGATGCCGAAAAGACTTTTTACCGCTAAAAGCACGGCTGGGAATTGGAAATGTTGTCTGTGTATTAGCCGGCCTATTTGGATTCCTTGGGTGGGAAGTGATACGCCATAAAAGGAGCATGAAAAAACAAGCTCTCTTAAGACAGACAGATGAATTTTTTCAACAGCACGGAGGCCAGCTACTTCTAGAAATGATGAAAGTTGAGGGCAATGCTGGGTTCAACCTCTATGACAGACAGGAGATCGAGACTGCCACGAATAACTTCAACAAGGCGCACATCGTTGGGGAAGGAGGGCAGGGAACCGTTTACAGGGCAGTGTTAGGCGGAGTTGCCGTCGCAATTAAAATGTGCAAGGAGATTGACGAGAGCAGGAAGATGGAATTCGTGCAGGAACTAGTCATACTTTGCCGTGTCAACCATCCTAACATTGTCAAGTTACTCGGTTGTTGCCTCCAGTTTGAGGCACCCATACTTGTGTACGAGTTTGTGCAGAACAAAACACTGCAAGAGCTGATGGATCTGCAAAGGAGCAGGAGGTTCTATGTCACACTAGGAACCCGCCTGAGGATTGCCGCGGAATCAGCCGGCGCACTTGCACATCTCCACTCTCTACCACACCCTGTACTCCATGGTGACGTAAAGCCAGCCAACATCCTACTTGCCGAGGGATTGGTCGCAAAGGTGTCTGACTTTGGTTGCTCAACAATTGATGAGAATACTCAGGCTGTGCCCAAAGGCACACCAGGGTATATTGACCCAGACTACCTACTTGAGTACGAGCTCACAGCCAAGAATGACATATATAGCTTCGGAGTTATTCTTGTTGAGCTTCTAACTGGTATGAAGCCATTGTCAAAAGAAAGGAAGAGCTTGACCTCATTGTTTCTGGAGGCTATGGCAGATGGCACAGTCCGTGAGCTCCTTGATAGTGACATAGTTGATGAAGCTTGCATGAGAGTGATCCATCGGGCTGCAGTGTTGGCAAGTCAATGTTTGGTTGTTCCGGGTATGGCAAGACCAACAATGGCTCTGGTAGCAGAGGAGCTCAAGTATCTTGCGCTAGCAGATGAAGTGCATCAATGCCCACAACCACCATTTGTGCTTGAGGGGATGAGCTTTATGGATATGGGAAGCACAGTATCCATTTGGTACGACGAGAGCAGGACCAGCGGGGTTTACAGCCTGGAGAATAAGGCCGTGTTGAGCACAGAATTCTCTAGATGA
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| Protein seq | MYLQNLLYYVTEGVLKVSTALSVFIYDRFLRSSWNCDCAGVLDQETHSSIIKLPMAPLREVMVAMRAAFCENIWLLMLLLSTALAAPFAAGETALCKNTTCGGVDIPCPFGISTESCAMGSGFDVDCTDTGNGVYKPFYGDVELLGIDIQHGQARVNNHISSSCYDAISKGMNSTEWFLNLTDTPFMLSDSNKFTVVGCRTLAYIANQDYVGKYMSGCVSGCRRGDVSKATNGICSGIGCCQTAIPKGLDYYQVFFDFSSMNTSGIYNRTPCSYAVLMDSSNFTFSTTYLTSLEFNSTNDGQAPMVLDWAIRSANTCEEAQKKNDSYACKSTNSECFNSTNGSGYICNCSKGYEGNPYLQGSNGCRDIDECLYSKTYPCYGKCRNKPGDFDCTCQAGSKGNATIPGGCRKDFLPLKARLGIGNVVCVLAGLFGFLGWEVIRHKRSMKKQALLRQTDEFFQQHGGQLLLEMMKVEGNAGFNLYDRQEIETATNNFNKAHIVGEGGQGTVYRAVLGGVAVAIKMCKEIDESRKMEFVQELVILCRVNHPNIVKLLGCCLQFEAPILVYEFVQNKTLQELMDLQRSRRFYVTLGTRLRIAAESAGALAHLHSLPHPVLHGDVKPANILLAEGLVAKVSDFGCSTIDENTQAVPKGTPGYIDPDYLLEYELTAKNDIYSFGVILVELLTGMKPLSKERKSLTSLFLEAMADGTVRELLDSDIVDEACMRVIHRAAVLASQCLVVPGMARPTMALVAEELKYLALADEVHQCPQPPFVLEGMSFMDMGSTVSIWYDESRTSGVYSLENKAVLSTEFSR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.70305 | 1.5774315 | 0.0704735 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0368000 | SBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g30060 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0368000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0009990 | SBH | 0.0 | 2.109517 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010750 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010500 | SBH | 0.0 | 2.579199 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010150 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010370 | RBH | 3.210930 | 0.0 | 2.762189 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0294200 | SBH | 0 | 0.0162395 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0010040 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0283400 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010110 | SBH | 0.018769 | 0.212470 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0010230 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0010280 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0010700 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010240 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009450 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009480 | SBH | 0.0 | 0.0 | 0.0 |
