Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_04G0134200		OGI:04027370 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr04:8766872-8770270		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		RLCK138, OsRLCK138, SDK5
DNA seq		ATGGCGGCTTACCTTGCAGTGTTTGTGTTCCTGCTTCTTGTTTGTTCGTCATGCAGAGCTGATGACAGGCTTACACCTGCAAGGCCGCTCTCCCCCGGCGACGAGCTCATCTCCAGCGGCGGCGTCTTCGCTCTCGGCTTCTTCTCCCCGACGAGCTCAACTTCGGACTTGTACGTCGGCGTGTGGTACAACCAGATCCCCGTGCGCACCTACGTGTGGGTCGCCAACCGCAACACCCCGATCAAGAAGAGCTCCTCCGTGAAGCTGGTCTTGACCAACGATTCCGACCTCGTGCTGTCCGACTCCAGTGGCGGCGGTGGCGGCGCCGTCTGGACGACGGCGAACAACGTCACCGCCGCCGGTGGTGGTGCTGGAGCAACGGCTGTGCTGCTCGACTCCGGCAACTTCGTCGTGCGGCTGCCGAACGGGTCTGAGGTATGGCGGAGCTTCGATCACCCGACGGACACCATCGTGCCCAACGTGAGTTTCTCGCTGAGCTACATGGCCAACAGCTTAGACCGCATCGTCGCGTGGAGGGGGCCCAACGACCCGTCCGCCGGCGACTTCACCATGGGCGGCGACTCCAGCTCGGACCTCCAGATCGTCGTCTGGAACGGGACGAGGCCGTACTGGCGACGAGCGGCGTGGACCGGCGCGTCCATCTTCGGCGTGATCCAGAGCAACACTAGCTTCAAGCTGTACCAGACGATCGACGGCGACATGGCCGACGGCTACTCCTTCAAGCTGACCGTCGCCGACGGCTCGCCGCCGATGCGCATGACGCTGGACTACACCGGCGAGCTCACCTTCCAGAGCTGGGACGGCAACACGTCGTCGTGGACCGTCTTCACCCGGTTCCCCACCGGCTGCGACAAGTACGCCTCGTGCGGGCCATTCGGCTACTGCGACGGCATCGGCGCCACGGCGACTCCGACGTGCAAGTGCCTCGACGGTTTCGTCCCCGTCGACAGCAGCCATGACGTCTCGAGAGGTTGCCGGAGGAAGGACGAGGAGGTGGGATGCGTCAGCGGCGGCGGCGGCGATGGCTTGTTGACCATGCCGAGCATGAGGACACCGGACAAGTTCTTGTACGTGAGGAACAGAAGCTTCGACCAGTGCACCGCAGAGTGCAGCCGCAACTGCTCCTGCACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGCTTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAGAACCTCTACCTCCGGATTCCTGGCTCACGAGGCATGTATTTCGATAACCTTTACGGTGTTCTCTACTGGTTGTAGAAATGATTTCTTGGATATTTTCTTTATTCTGGACTGTATAATAATATGATTAATTCGCTTGATATGTAATGTGATTAATGATTTCTGCAGTTAATAACAAGATGAAAAGTACTGTGCTGAAGATTGTACTGCCGGTTGCGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTACGCAAATCAAGAGGTAGAGTGTAAAAAACATTACTTTGCTCTTTGATGAGATATTTCACTTGTATGAAACAATAATGATGATACAGAGGCGTTCCTTTCAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACACATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGATTCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAGGTAATAATGATAAGTCTTAGCTTGATTTTTGAGTTAAAGATATATGATATGTTATAGCTTATCTCTTGTTTAATCAAAGAATGGTGCAATATATATTTAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGCAAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTACAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTCATCTACGAATACTTACCAAACAGAAGCTTGGATGCCTTCCTTTTTGGTACGTTATTTCTGACTTATGATCTCTGACAATAAACTGAAGGGATATTGATGATGTCTGACAATAAATTTCATTCCACATTGATCTTGGAAGATGCTAACAGAAAAAACACGCTTGACTGGCCGACAAGGTTCAAGATAATTAAAGGAGTAGCAAGAGGTCTTCTTTATCTTCACCAGGATTCAAGATTAACAATAATCCATAGAGATCTAAAGACAAGCAACATTTTGTTGGACACAGAAATGAGTCCTAAAATATCAGATTTCGGCATGGCAAGGATCTTTGGTGGAAATGAGCAACAAGCTAATACCACCAGGGTTGTCGGCACATAGTAAGCAGTTCATACTTCATATATGAGCTAATGTTCAACGTGCAAACTATTTACCCTAATTCAAACTGCATATTGTTTCCTGAATTATTTAAACAGTGGTTACATGTCTCCTGAATATGCTTTGGATGGCTATTTTTCCGTCAAGTCTGACACCTATAGTTTTGGTGTCATACTATTGGAAGTTGTGAGTGGCTTAAAGATGAGTTCAGCCCATCTCAAAGTGGACTGTTCAAACCTTATAGCCTATGTAAGTATAGCACAACGCTCAAATTTCTGCAAGTCAAACTAAATGTAATGAGTTGAGATATCATAACTTGATTTGTTTCTTCAGGCATGGAGCTTATGGAAAGATGGAAATGCAAGGGATTTCGTAGACTCATCCATTGTGTTGAGCTGTCCACTTCATGAAGTTCTACGATGTATACATTTAGGACTCCTTTGCATTCAAGATCAACCAAGTGATAGGCCACTGATGTCATCCATTGTGTTCATGCTGGAGAACGAAATTGCCGTGCTTCCTGCTCCAGAGGAGCCTATATATTTCACAAGGAGGGAGTACGGGACAGACGAAGACACGAGAGATAGCATGAGATCAAGATCTCTGAACCACATGAGTATAACAGCAGAAGATGGGCGTTAAATGGTTAATTCCGCTGTACAGATCCCAATTTTTTAAAACTGTTATTCCAATTGAACAATACCATTACATTGTTTGATTTAAAAAGGTTCTACTGGATACTACATTATTCACTGGTTGGCTTGCGTTTATAAAAACTCTCTTTAGTTTTTTTATATAAATGTAAAACATTACTCCCTCCTTAGATCTTTATAAGGCACATTTTGATTTAAAAATGTCAAGCTTTATAAACTTTGACCAACAATTAGCGGATGGCATATCTCGTAGGATGTTTATGTAATGATGTGACTAATAAAATAAAATTCCTGATACAC More
CDS seq		ATGGCGGCTTACCTTGCAGTGTTTGTGTTCCTGCTTCTTGTTTGTTCGTCATGCAGAGCTGATGACAGGCTTACACCTGCAAGGCCGCTCTCCCCCGGCGACGAGCTCATCTCCAGCGGCGGCGTCTTCGCTCTCGGCTTCTTCTCCCCGACGAGCTCAACTTCGGACTTGTACGTCGGCGTGTGGTACAACCAGATCCCCGTGCGCACCTACGTGTGGGTCGCCAACCGCAACACCCCGATCAAGAAGAGCTCCTCCGTGAAGCTGGTCTTGACCAACGATTCCGACCTCGTGCTGTCCGACTCCAGTGGCGGCGGTGGCGGCGCCGTCTGGACGACGGCGAACAACGTCACCGCCGCCGGTGGTGGTGCTGGAGCAACGGCTGTGCTGCTCGACTCCGGCAACTTCGTCGTGCGGCTGCCGAACGGGTCTGAGGTATGGCGGAGCTTCGATCACCCGACGGACACCATCGTGCCCAACGTGAGTTTCTCGCTGAGCTACATGGCCAACAGCTTAGACCGCATCGTCGCGTGGAGGGGGCCCAACGACCCGTCCGCCGGCGACTTCACCATGGGCGGCGACTCCAGCTCGGACCTCCAGATCGTCGTCTGGAACGGGACGAGGCCGTACTGGCGACGAGCGGCGTGGACCGGCGCGTCCATCTTCGGCGTGATCCAGAGCAACACTAGCTTCAAGCTGTACCAGACGATCGACGGCGACATGGCCGACGGCTACTCCTTCAAGCTGACCGTCGCCGACGGCTCGCCGCCGATGCGCATGACGCTGGACTACACCGGCGAGCTCACCTTCCAGAGCTGGGACGGCAACACGTCGTCGTGGACCGTCTTCACCCGGTTCCCCACCGGCTGCGACAAGTACGCCTCGTGCGGGCCATTCGGCTACTGCGACGGCATCGGCGCCACGGCGACTCCGACGTGCAAGTGCCTCGACGGTTTCGTCCCCGTCGACAGCAGCCATGACGTCTCGAGAGGTTGCCGGAGGAAGGACGAGGAGGTGGGATGCGTCAGCGGCGGCGGCGGCGATGGCTTGTTGACCATGCCGAGCATGAGGACACCGGACAAGTTCTTGTACGTGAGGAACAGAAGCTTCGACCAGTGCACCGCAGAGTGCAGCCGCAACTGCTCCTGCACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGCTTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAGAACCTCTACCTCCGGATTCCTGGCTCACGAGGCATGTATTTCGATAACCTTTACGTTAATAACAAGATGAAAAGTACTGTGCTGAAGATTGTACTGCCGGTTGCGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTACGCAAATCAAGAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACACATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGATTCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGCAAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTACAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTCATCTACGAATACTTACCAAACAGAAGCTTGGATGCCTTCCTTTTTGATGCTAACAGAAAAAACACGCTTGACTGGCCGACAAGGTTCAAGATAATTAAAGGAGTAGCAAGAGGTCTTCTTTATCTTCACCAGGATTCAAGATTAACAATAATCCATAGAGATCTAAAGACAAGCAACATTTTGTTGGACACAGAAATGAGTCCTAAAATATCAGATTTCGGCATGGCAAGGATCTTTGGTGGAAATGAGCAACAAGCTAATACCACCAGGGTTGTCGGCACATATGGTTACATGTCTCCTGAATATGCTTTGGATGGCTATTTTTCCGTCAAGTCTGACACCTATAGTTTTGGTGTCATACTATTGGAAGTTGTGAGTGGCTTAAAGATGAGTTCAGCCCATCTCAAAGTGGACTGTTCAAACCTTATAGCCTATGCATGGAGCTTATGGAAAGATGGAAATGCAAGGGATTTCGTAGACTCATCCATTGTGTTGAGCTGTCCACTTCATGAAGTTCTACGATGTATACATTTAGGACTCCTTTGCATTCAAGATCAACCAAGTGATAGGCCACTGATGTCATCCATTGTGTTCATGCTGGAGAACGAAATTGCCGTGCTTCCTGCTCCAGAGGAGCCTATATATTTCACAAGGAGGGAGTACGGGACAGACGAAGACACGAGAGATAGCATGAGATCAAGATCTCTGAACCACATGAGTATAACAGCAGAAGATGGGCGTTAA More
Protein seq		MAAYLAVFVFLLLVCSSCRADDRLTPARPLSPGDELISSGGVFALGFFSPTSSTSDLYVGVWYNQIPVRTYVWVANRNTPIKKSSSVKLVLTNDSDLVLSDSSGGGGGAVWTTANNVTAAGGGAGATAVLLDSGNFVVRLPNGSEVWRSFDHPTDTIVPNVSFSLSYMANSLDRIVAWRGPNDPSAGDFTMGGDSSSDLQIVVWNGTRPYWRRAAWTGASIFGVIQSNTSFKLYQTIDGDMADGYSFKLTVADGSPPMRMTLDYTGELTFQSWDGNTSSWTVFTRFPTGCDKYASCGPFGYCDGIGATATPTCKCLDGFVPVDSSHDVSRGCRRKDEEVGCVSGGGGDGLLTMPSMRTPDKFLYVRNRSFDQCTAECSRNCSCTAYAYAILNNADATEDRSRCLVWMGELVDTGKFSDGAGGENLYLRIPGSRGMYFDNLYVNNKMKSTVLKIVLPVAAGLLLILGGICLVRKSRGNQPSKKVQSKYPFQHMNDSNEVGSENVELSSVDLDSVLTATNNFSDYNLLGKGGFGKVYKGVLEGGIEVAVKRLSKGSGQGVEEFRNEVVLIAKLQHRNLVRLLGCCIHEDEKLLIYEYLPNRSLDAFLFDANRKNTLDWPTRFKIIKGVARGLLYLHQDSRLTIIHRDLKTSNILLDTEMSPKISDFGMARIFGGNEQQANTTRVVGTYGYMSPEYALDGYFSVKSDTYSFGVILLEVVSGLKMSSAHLKVDCSNLIAYAWSLWKDGNARDFVDSSIVLSCPLHEVLRCIHLGLLCIQDQPSDRPLMSSIVFMLENEIAVLPAPEEPIYFTRREYGTDEDTRDSMRSRSLNHMSITAEDGR
Function		G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [UniProtKB/Swiss-Prot:Q9SXB8]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_04G0134200	OsZS97_04T0134200.1	Chr04	8766872	8770270	+	makerRMon
CDS seq	ATGGCGGCTTACCTTGCAGTGTTTGTGTTCCTGCTTCTTGTTTGTTCGTCATGCAGAGCTGATGACAGGCTTACACCTGCAAGGCCGCTCTCCCCCGGCGACGAGCTCATCTCCAGCGGCGGCGTCTTCGCTCTCGGCTTCTTCTCCCCGACGAGCTCAACTTCGGACTTGTACGTCGGCGTGTGGTACAACCAGATCCCCGTGCGCACCTACGTGTGGGTCGCCAACCGCAACACCCCGATCAAGAAGAGCTCCTCCGTGAAGCTGGTCTTGACCAACGATTCCGACCTCGTGCTGTCCGACTCCAGTGGCGGCGGTGGCGGCGCCGTCTGGACGACGGCGAACAACGTCACCGCCGCCGGTGGTGGTGCTGGAGCAACGGCTGTGCTGCTCGACTCCGGCAACTTCGTCGTGCGGCTGCCGAACGGGTCTGAGGTATGGCGGAGCTTCGATCACCCGACGGACACCATCGTGCCCAACGTGAGTTTCTCGCTGAGCTACATGGCCAACAGCTTAGACCGCATCGTCGCGTGGAGGGGGCCCAACGACCCGTCCGCCGGCGACTTCACCATGGGCGGCGACTCCAGCTCGGACCTCCAGATCGTCGTCTGGAACGGGACGAGGCCGTACTGGCGACGAGCGGCGTGGACCGGCGCGTCCATCTTCGGCGTGATCCAGAGCAACACTAGCTTCAAGCTGTACCAGACGATCGACGGCGACATGGCCGACGGCTACTCCTTCAAGCTGACCGTCGCCGACGGCTCGCCGCCGATGCGCATGACGCTGGACTACACCGGCGAGCTCACCTTCCAGAGCTGGGACGGCAACACGTCGTCGTGGACCGTCTTCACCCGGTTCCCCACCGGCTGCGACAAGTACGCCTCGTGCGGGCCATTCGGCTACTGCGACGGCATCGGCGCCACGGCGACTCCGACGTGCAAGTGCCTCGACGGTTTCGTCCCCGTCGACAGCAGCCATGACGTCTCGAGAGGTTGCCGGAGGAAGGACGAGGAGGTGGGATGCGTCAGCGGCGGCGGCGGCGATGGCTTGTTGACCATGCCGAGCATGAGGACACCGGACAAGTTCTTGTACGTGAGGAACAGAAGCTTCGACCAGTGCACCGCAGAGTGCAGCCGCAACTGCTCCTGCACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGCTTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAGAACCTCTACCTCCGGATTCCTGGCTCACGAGGCATGTATTTCGATAACCTTTACGTTAATAACAAGATGAAAAGTACTGTGCTGAAGATTGTACTGCCGGTTGCGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTACGCAAATCAAGAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACACATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGATTCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGCAAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTACAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTCATCTACGAATACTTACCAAACAGAAGCTTGGATGCCTTCCTTTTTGATGCTAACAGAAAAAACACGCTTGACTGGCCGACAAGGTTCAAGATAATTAAAGGAGTAGCAAGAGGTCTTCTTTATCTTCACCAGGATTCAAGATTAACAATAATCCATAGAGATCTAAAGACAAGCAACATTTTGTTGGACACAGAAATGAGTCCTAAAATATCAGATTTCGGCATGGCAAGGATCTTTGGTGGAAATGAGCAACAAGCTAATACCACCAGGGTTGTCGGCACATATGGTTACATGTCTCCTGAATATGCTTTGGATGGCTATTTTTCCGTCAAGTCTGACACCTATAGTTTTGGTGTCATACTATTGGAAGTTGTGAGTGGCTTAAAGATGAGTTCAGCCCATCTCAAAGTGGACTGTTCAAACCTTATAGCCTATGCATGGAGCTTATGGAAAGATGGAAATGCAAGGGATTTCGTAGACTCATCCATTGTGTTGAGCTGTCCACTTCATGAAGTTCTACGATGTATACATTTAGGACTCCTTTGCATTCAAGATCAACCAAGTGATAGGCCACTGATGTCATCCATTGTGTTCATGCTGGAGAACGAAATTGCCGTGCTTCCTGCTCCAGAGGAGCCTATATATTTCACAAGGAGGGAGTACGGGACAGACGAAGACACGAGAGATAGCATGAGATCAAGATCTCTGAACCACATGAGTATAACAGCAGAAGATGGGCGTTAA More
Protein seq	MAAYLAVFVFLLLVCSSCRADDRLTPARPLSPGDELISSGGVFALGFFSPTSSTSDLYVGVWYNQIPVRTYVWVANRNTPIKKSSSVKLVLTNDSDLVLSDSSGGGGGAVWTTANNVTAAGGGAGATAVLLDSGNFVVRLPNGSEVWRSFDHPTDTIVPNVSFSLSYMANSLDRIVAWRGPNDPSAGDFTMGGDSSSDLQIVVWNGTRPYWRRAAWTGASIFGVIQSNTSFKLYQTIDGDMADGYSFKLTVADGSPPMRMTLDYTGELTFQSWDGNTSSWTVFTRFPTGCDKYASCGPFGYCDGIGATATPTCKCLDGFVPVDSSHDVSRGCRRKDEEVGCVSGGGGDGLLTMPSMRTPDKFLYVRNRSFDQCTAECSRNCSCTAYAYAILNNADATEDRSRCLVWMGELVDTGKFSDGAGGENLYLRIPGSRGMYFDNLYVNNKMKSTVLKIVLPVAAGLLLILGGICLVRKSRGNQPSKKVQSKYPFQHMNDSNEVGSENVELSSVDLDSVLTATNNFSDYNLLGKGGFGKVYKGVLEGGIEVAVKRLSKGSGQGVEEFRNEVVLIAKLQHRNLVRLLGCCIHEDEKLLIYEYLPNRSLDAFLFDANRKNTLDWPTRFKIIKGVARGLLYLHQDSRLTIIHRDLKTSNILLDTEMSPKISDFGMARIFGGNEQQANTTRVVGTYGYMSPEYALDGYFSVKSDTYSFGVILLEVVSGLKMSSAHLKVDCSNLIAYAWSLWKDGNARDFVDSSIVLSCPLHEVLRCIHLGLLCIQDQPSDRPLMSSIVFMLENEIAVLPAPEEPIYFTRREYGTDEDTRDSMRSRSLNHMSITAEDGR More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_04G0134200	OsZS97_04T0134200.2	Chr04	8766872	8770270	+	makerRMon
CDS seq	ATGGCGGCTTACCTTGCAGTGTTTGTGTTCCTGCTTCTTGTTTGTTCGTCATGCAGAGCTGATGACAGGCTTACACCTGCAAGGCCGCTCTCCCCCGGCGACGAGCTCATCTCCAGCGGCGGCGTCTTCGCTCTCGGCTTCTTCTCCCCGACGAGCTCAACTTCGGACTTGTACGTCGGCGTGTGGTACAACCAGATCCCCGTGCGCACCTACGTGTGGGTCGCCAACCGCAACACCCCGATCAAGAAGAGCTCCTCCGTGAAGCTGGTCTTGACCAACGATTCCGACCTCGTGCTGTCCGACTCCAGTGGCGGCGGTGGCGGCGCCGTCTGGACGACGGCGAACAACGTCACCGCCGCCGGTGGTGGTGCTGGAGCAACGGCTGTGCTGCTCGACTCCGGCAACTTCGTCGTGCGGCTGCCGAACGGGTCTGAGGTATGGCGGAGCTTCGATCACCCGACGGACACCATCGTGCCCAACGTGAGTTTCTCGCTGAGCTACATGGCCAACAGCTTAGACCGCATCGTCGCGTGGAGGGGGCCCAACGACCCGTCCGCCGGCGACTTCACCATGGGCGGCGACTCCAGCTCGGACCTCCAGATCGTCGTCTGGAACGGGACGAGGCCGTACTGGCGACGAGCGGCGTGGACCGGCGCGTCCATCTTCGGCGTGATCCAGAGCAACACTAGCTTCAAGCTGTACCAGACGATCGACGGCGACATGGCCGACGGCTACTCCTTCAAGCTGACCGTCGCCGACGGCTCGCCGCCGATGCGCATGACGCTGGACTACACCGGCGAGCTCACCTTCCAGAGCTGGGACGGCAACACGTCGTCGTGGACCGTCTTCACCCGGTTCCCCACCGGCTGCGACAAGTACGCCTCGTGCGGGCCATTCGGCTACTGCGACGGCATCGGCGCCACGGCGACTCCGACGTGCAAGTGCCTCGACGGTTTCGTCCCCGTCGACAGCAGCCATGACGTCTCGAGAGGTTGCCGGAGGAAGGACGAGGAGGTGGGATGCGTCAGCGGCGGCGGCGGCGATGGCTTGTTGACCATGCCGAGCATGAGGACACCGGACAAGTTCTTGTACGTGAGGAACAGAAGCTTCGACCAGTGCACCGCAGAGTGCAGCCGCAACTGCTCCTGCACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGCTTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAGAACCTCTACCTCCGGATTCCTGGCTCACGAGGCATGTATTTCGATAACCTTTACGTTAATAACAAGATGAAAAGTACTGTGCTGAAGATTGTACTGCCGGTTGCGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTACGCAAATCAAGAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACACATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGATTCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGCAAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTACAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTCATCTACGAATACTTACCAAACAGAAGCTTGGATGCCTTCCTTTTTGATTTCGGCATGGCAAGGATCTTTGGTGGAAATGAGCAACAAGCTAATACCACCAGGGTTGTCGGCACATATGGTTACATGTCTCCTGAATATGCTTTGGATGGCTATTTTTCCGTCAAGTCTGACACCTATAGTTTTGGTGTCATACTATTGGAAGTTGTGAGTGGCTTAAAGATGAGTTCAGCCCATCTCAAAGTGGACTGTTCAAACCTTATAGCCTATGCATGGAGCTTATGGAAAGATGGAAATGCAAGGGATTTCGTAGACTCATCCATTGTGTTGAGCTGTCCACTTCATGAAGTTCTACGATGTATACATTTAGGACTCCTTTGCATTCAAGATCAACCAAGTGATAGGCCACTGATGTCATCCATTGTGTTCATGCTGGAGAACGAAATTGCCGTGCTTCCTGCTCCAGAGGAGCCTATATATTTCACAAGGAGGGAGTACGGGACAGACGAAGACACGAGAGATAGCATGAGATCAAGATCTCTGAACCACATGAGTATAACAGCAGAAGATGGGCGTTAA More
Protein seq	MAAYLAVFVFLLLVCSSCRADDRLTPARPLSPGDELISSGGVFALGFFSPTSSTSDLYVGVWYNQIPVRTYVWVANRNTPIKKSSSVKLVLTNDSDLVLSDSSGGGGGAVWTTANNVTAAGGGAGATAVLLDSGNFVVRLPNGSEVWRSFDHPTDTIVPNVSFSLSYMANSLDRIVAWRGPNDPSAGDFTMGGDSSSDLQIVVWNGTRPYWRRAAWTGASIFGVIQSNTSFKLYQTIDGDMADGYSFKLTVADGSPPMRMTLDYTGELTFQSWDGNTSSWTVFTRFPTGCDKYASCGPFGYCDGIGATATPTCKCLDGFVPVDSSHDVSRGCRRKDEEVGCVSGGGGDGLLTMPSMRTPDKFLYVRNRSFDQCTAECSRNCSCTAYAYAILNNADATEDRSRCLVWMGELVDTGKFSDGAGGENLYLRIPGSRGMYFDNLYVNNKMKSTVLKIVLPVAAGLLLILGGICLVRKSRGNQPSKKVQSKYPFQHMNDSNEVGSENVELSSVDLDSVLTATNNFSDYNLLGKGGFGKVYKGVLEGGIEVAVKRLSKGSGQGVEEFRNEVVLIAKLQHRNLVRLLGCCIHEDEKLLIYEYLPNRSLDAFLFDFGMARIFGGNEQQANTTRVVGTYGYMSPEYALDGYFSVKSDTYSFGVILLEVVSGLKMSSAHLKVDCSNLIAYAWSLWKDGNARDFVDSSIVLSCPLHEVLRCIHLGLLCIQDQPSDRPLMSSIVFMLENEIAVLPAPEEPIYFTRREYGTDEDTRDSMRSRSLNHMSITAEDGR More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	2.0415695	2.0926975	0.019729

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0226600	RBH	1.640123	2.160937	2.548445
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g15580	RBH	1.197758	1.480411	0.692178
Nipponbare \| IRGSP 1.0 \| RAP-db	Os04g0226600	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0004960	RBH	0.0	0.000000	0.000000
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0005590	RBH	0.299781	0.0	1.487740
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0005210	RBH	0.0	0.000000	1.617761
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0005030	RBH	0.000000	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0004970	RBH	0.439477	0.0	0.000000
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_04G0126900	RBH	1.1190855	2.9529385	0.178921
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0005010	RBH	0.000000	0.0	0.181777
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0133800	RBH	0.3016315	0.620074	0
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0004810	RBH	0.000000	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_04g0005170	RBH	0.076574	1.161369	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_04g0004920	RBH	0.0	2.919210	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_Ung0016830	RBH	0.0	0.0	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0005070	RBH	0.0	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_04G005110	RBH	0.000000	0.0	0.321028
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0004930	RBH	0.000000	1.492970	3.258828

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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