Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_04G0057900 | OGI:04011550 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr04:3801002-3801869 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCCGGGTTGATTGGCATGGCATGGTATTCGAGTGGACCAAGACATCATTTTATATCTTTGAAAATGATCCAATTCCCCTGCACGTACATAGCTTGGTCCCATCTCTCTTCTCTAATGCTCCCTCTAAAACATTCACTACAGGGGCTTGGTGTTGACCCAAAGGGTGAAGGAGTTGGAGCGCATAAACACTACACTATCTAATGAGAAGAATGACCTAGAGAGAAGGGTGCAGAGGTTGGAGTACGAAAACACCGAGCTGTCTAATGAGAAGAGGTGGGCGGCAGATGTGTACTCAAGAAGGATCTCCACACTAGAATACCAGGTGTGGGAGCTGGAGCACCAAAACACCAAACTGTCCAGTGAGCTGGTAAGGCAAAGGGAGGACACGAGGACAGTGGGTCTGCTGTTCATGAATGCTGCCGATAGGTACCAACACGTAGCAGAGGTGCAAATTAGGACAAAGGAAGAGGAATTGGTGAACATGAGGAAGGCAAGCATGCAGTTAATGAATGCTGCTGATACGTACCAAGAAGTAGCAAGGAAGCAAATTAAGGCAAAGGAGGATGACTTGGAGGATGCGAGGAAGGCGATTTTAATGATCATGAATGCTGCTGATACATACCAACAAGTAGCAGAGAAGAAAATTAAGGATAAGGTGGAGGAACTGAGGGTCCTTGGGGTTCAAAAGGCAGATATGGATGGGAGGATAGCATCGTTGGAGTCCAGGCTCGAGGCAGCTCTAGTGAAGAATCAGGAATTGGAGTCTACTTATGTTAAGGCGTTGATTGAAAATGATAGGCTTTGGTCAGTCATTGAGAGGCTCATGATGGGCGCACTAGTTGAGGTGAAATGCAAAGGCATCTGA
More
|
||||||||||
| CDS seq | ATGGCCGGGTTGATTGGCATGGCATGGGGCTTGGTGTTGACCCAAAGGGTGAAGGAGTTGGAGCGCATAAACACTACACTATCTAATGAGAAGAATGACCTAGAGAGAAGGGTGCAGAGGTTGGAGTACGAAAACACCGAGCTGTCTAATGAGAAGAGGTGGGCGGCAGATGTGTACTCAAGAAGGATCTCCACACTAGAATACCAGGTGTGGGAGCTGGAGCACCAAAACACCAAACTGTCCAGTGAGCTGGTAAGGCAAAGGGAGGACACGAGGACAGTGGGTCTGCTGTTCATGAATGCTGCCGATAGGTACCAACACGTAGCAGAGGTGCAAATTAGGACAAAGGAAGAGGAATTGGTGAACATGAGGAAGGCAAGCATGCAGTTAATGAATGCTGCTGATACGTACCAAGAAGTAGCAAGGAAGCAAATTAAGGCAAAGGAGGATGACTTGGAGGATGCGAGGAAGGCGATTTTAATGATCATGAATGCTGCTGATACATACCAACAAGTAGCAGAGAAGAAAATTAAGGATAAGGTGGAGGAACTGAGGGTCCTTGGGGTTCAAAAGGCAGATATGGATGGGAGGATAGCATCGTTGGAGTCCAGGCTCGAGGCAGCTCTAGTGAAGAATCAGGAATTGGAGTCTACTTATGTTAAGGCGTTGATTGAAAATGATAGGCTTTGGTCAGTCATTGAGAGGCTCATGATGGGCGCACTAGTTGAGGTGAAATGCAAAGGCATCTGA
More
|
||||||||||
| Protein seq | MAGLIGMAWGLVLTQRVKELERINTTLSNEKNDLERRVQRLEYENTELSNEKRWAADVYSRRISTLEYQVWELEHQNTKLSSELVRQREDTRTVGLLFMNAADRYQHVAEVQIRTKEEELVNMRKASMQLMNAADTYQEVARKQIKAKEDDLEDARKAILMIMNAADTYQQVAEKKIKDKVEELRVLGVQKADMDGRIASLESRLEAALVKNQELESTYVKALIENDRLWSVIERLMMGALVEVKCKGI |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_04G0057900 | OsZS97_04T0057900.1 | Chr04 | 3801002 | 3801869 | + | makerRMon | ||
| CDS seq | ATGGCCGGGTTGATTGGCATGGCATGGGGCTTGGTGTTGACCCAAAGGGTGAAGGAGTTGGAGCGCATAAACACTACACTATCTAATGAGAAGAATGACCTAGAGAGAAGGGTGCAGAGGTTGGAGTACGAAAACACCGAGCTGTCTAATGAGAAGAGGTGGGCGGCAGATGTGTACTCAAGAAGGATCTCCACACTAGAATACCAGGTGTGGGAGCTGGAGCACCAAAACACCAAACTGTCCAGTGAGCTGGTAAGGCAAAGGGAGGACACGAGGACAGTGGGTCTGCTGTTCATGAATGCTGCCGATAGGTACCAACACGTAGCAGAGGTGCAAATTAGGACAAAGGAAGAGGAATTGGTGAACATGAGGAAGGCAAGCATGCAGTTAATGAATGCTGCTGATACGTACCAAGAAGTAGCAAGGAAGCAAATTAAGGCAAAGGAGGATGACTTGGAGGATGCGAGGAAGGCGATTTTAATGATCATGAATGCTGCTGATACATACCAACAAGTAGCAGAGAAGAAAATTAAGGATAAGGTGGAGGAACTGAGGGTCCTTGGGGTTCAAAAGGCAGATATGGATGGGAGGATAGCATCGTTGGAGTCCAGGCTCGAGGCAGCTCTAGTGAAGAATCAGGAATTGGAGTCTACTTATGTTAAGGCGTTGATTGAAAATGATAGGCTTTGGTCAGTCATTGAGAGGCTCATGATGGGCGCACTAGTTGAGGTGAAATGCAAAGGCATCTGA
More
|
|||||||
| Protein seq | MAGLIGMAWGLVLTQRVKELERINTTLSNEKNDLERRVQRLEYENTELSNEKRWAADVYSRRISTLEYQVWELEHQNTKLSSELVRQREDTRTVGLLFMNAADRYQHVAEVQIRTKEEELVNMRKASMQLMNAADTYQEVARKQIKAKEDDLEDARKAILMIMNAADTYQQVAEKKIKDKVEELRVLGVQKADMDGRIASLESRLEAALVKNQELESTYVKALIENDRLWSVIERLMMGALVEVKCKGI
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.070783 | 0.025132 | 0.0057205 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0161400 | SBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g07130 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0161400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0002170 | SBH | 0.0 | 3.864706 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0002290 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0002100 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0002150 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0002140 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0055600 | RBH | 0.0552995 | 0.016835 | 0.009148 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0002180 | SBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0063600 | RBH | 0.2993565 | 0.4709915 | 0.0179145 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0002170 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0002400 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0002280 | SBH | 2.301323 | 6.716163 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0002090 | SBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0002110 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G002270 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0002190 | SBH | 0.0 | 9.525661 | 0.0 |
