Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_03G0378300		OGI:03061540 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr03:23829084-23832337		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		AACCAACCCGGCTATTCCATTCCCCTCTCATTTGGACCCCAAGGCCCATCCCAGGTCGCACGCTGATCTCCGCACCCGCCACCCGCAATGGTGGTGTCCGATTCCCCGAAACCCCAACCAACCCCCTCGCCGCCGGCGCCACCCCCACTTCCGGTCCCGGCGGCGGCGGGGACGACGATGGGGGAGCTGGAGGCGGCCATCGAGGCGCTCGCCGCCAAGAAGCTGCGCCTCCGCGAGGCCTTCGACTGCCTCGTCGCCTGCTCCCCCATCCCCATCCCCTTCCGCTGGGACGACATCGACGCCCACGTCTCGTCCATCCAGTCCTCCATCGCCGGCCGCTTCCGCCAGTTCCAGGCGCTCCAGACCGCCGCCACCGCTGGAATAACGGCGGCCCCGGCCACCAGCAACGCCAGCAGCCGCGTCGAGCGTTCGGTCGAACACCTTGTGGTGGTGGTGGAGGGCCAAGAGTCCCACGTCGCGCGCCATGAGGACGGTGGAAACGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGGGCTAGGCAAGGAGGTGGCTATGGACGTAGAATCCGAGGAGGAGAACGGCATGGTGGTGGAGGTGGCAAGCGAGGCGCCTCGCGGAAAAGACGGTGAGGTGAAGGAGGAGGACGAGAAGATGGGGGGGCCAATCAATGCGTCTCCTCCTAGCGAAGAAATCCATGGGAAGGGCGCGGACATGTCGAGAAGATGGGGGAATCCCATGGAAATGTCGGCCGACGTGGACGATGCGAAGACCAAGACGACGGCGACGGCGGCGGCGGCGGAACTGACGGCGATGGCGATCTCTCCGATTCCGGGATTCACAGGCAGAGGGGGCGCGGAGGCGTCGCTGAGGCGGTCTCTCGCGGCGGCGTGCGCGAGCATGGACTCGTCGAGCCTGGCGCGCATCCTGTGCTCGTCCGGCAGCAGCAGCAGCAGCCACGCCACCCTCGCCGCACGTCACTTCCGCCCGGCGCTTCTCGCCGCCGCCGAACCCGCGGCGCTCGTCGTCCGCGCCGTCAGGGACCTGCTGGCCGGGACGGCGCCCATCAGGGACAGCGCGTGGGAGAGCTGCGTGGAGCTGCTCAGCTGCGTGCCCAAGCTCGCCGTGGCGCCGTCGCCGGGCACGATGGAGCAGGCCAATCGCTTGGCCGAGGACTGGAAGGAGATGATCGGGAGGACCGAAAGTTGCAGCATGAACCTCGGCCGGTTGGCTGTATGGGGCCTTCTCAACTTTCTTGTCTCCTACAACATTGTCCTGGAGTTCGACGCGGAAGAAATCATCCATTTCTTTGGCACTCTCCCGGACGACAAGAAGCAGTGTTGCATCTCCCTCTGCAAGTATCTTGGACTGATTGACAAGATGGCTGGTACAGTTTCAATGCCTCTTACTCATACTCATTGCTCAACTATAATTTCATATGTTTGTAGGCAACTTATGCTACACATCTAGCGCAATTGTCGCGGATATGGAAATTCATTGATTTGTGCTTGTGTTCACATTCTTTAATGATAAGCTTGTTTAACTCCATGTCCCAAGCCTTCTTATGTTATATTTAGTGGCCATTAATTTGTTTATCATCTAACTGAATCAGTAGAAATTATGTTTTACACTTTTAGTCACAGTTAATACAGAGCATTAATTTGCATCCTAAAATGGTGACCTCAACATTATATTTGCATTTGCTAGTAAAAAAGTTATCTCATGAGCATTTTCTATATCCAAAAAGGGTTCCATGTGGACTTATGATTATCTCTCATTATTTCAGATTCAGTTGGTCATTTGATTGAACATGGACAACAACTTGTCGCTATCAGATTGGCATGCACTTTGAATTTGACAGACAAATACACTCCACTTTCCATCATGGAAGACTATATTCAGAATGCTAAGGAGACTGCTCAAGAGATACTGAGCATGGAAAGTGATTCAGAGTCACTGGTATGTCCCTTTTTATGCAGTAGCTATCTCATTTATATTTTCTACTCGTTTTTCTATCCAAAATTTCAAATCCGTGTGAATATGAATGGAAGAATAGTTCATTCATGTGCTCTAGAGCATGTAGCTCTTCACGTTGCAGAGTTAGAAAAAAAAAACTATATTCCTTTTTCTAATGTAACCCTCTTATGATTTAAAGGTAAACAACTGGTGTTTCTGGCTTTGTAAAAACTGTACTGCACAACATTCTGAAGCACTTAATTAGGATGTTTTCAATGTAATGATTTATTTAGGATGTAGTGGAGTAGTGGGTAATTTCAAATTATATATTCATATTGCTTTTAGAAAATATCATATTCAATTTGTGAAAAATCACTGCAGATCATTTGGCATGGTAAATGATTGCTTCCACATACTGATATACAAATATGCTTATTTTAAAATTGGTTTAACACACCTGATGCATCTTGTATTGAGCAGAAACTGTCCATGTCAAAGCAGGTCAATGCTCTAATATTGTCATGGAGGGTTGGTGGTGAATGCAATATTGACTCTGTCCATTGTGATAGAATTAAGGCAGAAATTACCCAGCTGTTGCATAAATATGCAAACAAGAGGCACAGCCTAGAAGAACTTCCTTCTGATACTTCTAGTCCACATCAGAAACATCACCAAATGTCGCAAGAGCAGCACCACTGGCAGCAAAAGCATCGAGAGGAACAACAGCAGCAGTTTCAAAATCAATCCAAGGAACAAGAACAAGAGAGAAGGATGCATAAGTTACGAGAGCTGAGGAAAAAGAAAAACAAGAGAACTCAGCGCAGGAAGCGGAAGCAAAATGCACAAGTGATGAAGCAGCATCAATTTGAGAAACAGCGAAAACTATATCACGCTGGTTCATTTACCAATTCTCAAAGCTATGTCAGATCAGAAATTCACCACCACCTCAGCCAGCATTTTTCAGGAACTATAGGAACACCTGTTGCACCATATACACCTGTTGCACCATATACCGGACCTTTTTGGTAGCTAGGGTCCATATATAATGGACCGGGTTCATCCTGCCTACATTCAACTATTCAAGTCAGAGTAGTAGTACTTGATACCATTACTGTTTGACTGAACTGAAGATAAAGATAGTAGAAGAGAACGAAAATTGCGCTGGTCGCAGAAAAACAGAAGTCACTCAATGCTGATTGGCCAGTGTAGCTTTGCACTGATTCAAATTTATCTTGTTGCACTACTACTTTCTATATGCAATGTACAATTAGTTACTTTCATGGTGC More
CDS seq		ATGGTGGTGTCCGATTCCCCGAAACCCCAACCAACCCCCTCGCCGCCGGCGCCACCCCCACTTCCGGTCCCGGCGGCGGCGGGGACGACGATGGGGGAGCTGGAGGCGGCCATCGAGGCGCTCGCCGCCAAGAAGCTGCGCCTCCGCGAGGCCTTCGACTGCCTCGTCGCCTGCTCCCCCATCCCCATCCCCTTCCGCTGGGACGACATCGACGCCCACGTCTCGTCCATCCAGTCCTCCATCGCCGGCCGCTTCCGCCAGTTCCAGGCGCTCCAGACCGCCGCCACCGCTGGAATAACGGCGGCCCCGGCCACCAGCAACGCCAGCAGCCGCGTCGAGCGTTCGGTCGAACACCTTGTGGTGGTGGTGGAGGGCCAAGAGTCCCACGTCGCGCGCCATGAGGACGGTGGAAACGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGGGCTAGGCAAGGAGGTGGCTATGGACGTAGAATCCGAGGAGGAGAACGGCATGGTGGTGGAGGTGGCAAGCGAGGCGCCTCGCGGAAAAGACGGTGAGGTGAAGGAGGAGGACGAGAAGATGGGGGGGCCAATCAATGCGTCTCCTCCTAGCGAAGAAATCCATGGGAAGGGCGCGGACATGTCGAGAAGATGGGGGAATCCCATGGAAATGTCGGCCGACGTGGACGATGCGAAGACCAAGACGACGGCGACGGCGGCGGCGGCGGAACTGACGGCGATGGCGATCTCTCCGATTCCGGGATTCACAGGCAGAGGGGGCGCGGAGGCGTCGCTGAGGCGGTCTCTCGCGGCGGCGTGCGCGAGCATGGACTCGTCGAGCCTGGCGCGCATCCTGTGCTCGTCCGGCAGCAGCAGCAGCAGCCACGCCACCCTCGCCGCACGTCACTTCCGCCCGGCGCTTCTCGCCGCCGCCGAACCCGCGGCGCTCGTCGTCCGCGCCGTCAGGGACCTGCTGGCCGGGACGGCGCCCATCAGGGACAGCGCGTGGGAGAGCTGCGTGGAGCTGCTCAGCTGCGTGCCCAAGCTCGCCGTGGCGCCGTCGCCGGGCACGATGGAGCAGGCCAATCGCTTGGCCGAGGACTGGAAGGAGATGATCGGGAGGACCGAAAGTTGCAGCATGAACCTCGGCCGGTTGGCTGTATGGGGCCTTCTCAACTTTCTTGTCTCCTACAACATTGTCCTGGAGTTCGACGCGGAAGAAATCATCCATTTCTTTGGCACTCTCCCGGACGACAAGAAGCAGTGTTGCATCTCCCTCTGCAAGTATCTTGGACTGATTGACAAGATGGCTGATTCAGTTGGTCATTTGATTGAACATGGACAACAACTTGTCGCTATCAGATTGGCATGCACTTTGAATTTGACAGACAAATACACTCCACTTTCCATCATGGAAGACTATATTCAGAATGCTAAGGAGACTGCTCAAGAGATACTGAGCATGGAAAGTGATTCAGAGTCACTGAAACTGTCCATGTCAAAGCAGGTCAATGCTCTAATATTGTCATGGAGGGTTGGTGGTGAATGCAATATTGACTCTGTCCATTGTGATAGAATTAAGGCAGAAATTACCCAGCTGTTGCATAAATATGCAAACAAGAGGCACAGCCTAGAAGAACTTCCTTCTGATACTTCTAGTCCACATCAGAAACATCACCAAATGTCGCAAGAGCAGCACCACTGGCAGCAAAAGCATCGAGAGGAACAACAGCAGCAGTTTCAAAATCAATCCAAGGAACAAGAACAAGAGAGAAGGATGCATAAGTTACGAGAGCTGAGGAAAAAGAAAAACAAGAGAACTCAGCGCAGGAAGCGGAAGCAAAATGCACAAGTGATGAAGCAGCATCAATTTGAGAAACAGCGAAAACTATATCACGCTGGTTCATTTACCAATTCTCAAAGCTATGTCAGATCAGAAATTCACCACCACCTCAGCCAGCATTTTTCAGGAACTATAGGAACACCTGTTGCACCATATACACCTGTTGCACCATATACCGGACCTTTTTGGTAG More
Protein seq		MVVSDSPKPQPTPSPPAPPPLPVPAAAGTTMGELEAAIEALAAKKLRLREAFDCLVACSPIPIPFRWDDIDAHVSSIQSSIAGRFRQFQALQTAATAGITAAPATSNASSRVERSVEHLVVVVEGQESHVARHEDGGNGEGEGEGEGEGEGEGGLGKEVAMDVESEEENGMVVEVASEAPRGKDGEVKEEDEKMGGPINASPPSEEIHGKGADMSRRWGNPMEMSADVDDAKTKTTATAAAAELTAMAISPIPGFTGRGGAEASLRRSLAAACASMDSSSLARILCSSGSSSSSHATLAARHFRPALLAAAEPAALVVRAVRDLLAGTAPIRDSAWESCVELLSCVPKLAVAPSPGTMEQANRLAEDWKEMIGRTESCSMNLGRLAVWGLLNFLVSYNIVLEFDAEEIIHFFGTLPDDKKQCCISLCKYLGLIDKMADSVGHLIEHGQQLVAIRLACTLNLTDKYTPLSIMEDYIQNAKETAQEILSMESDSESLKLSMSKQVNALILSWRVGGECNIDSVHCDRIKAEITQLLHKYANKRHSLEELPSDTSSPHQKHHQMSQEQHHWQQKHREEQQQQFQNQSKEQEQERRMHKLRELRKKKNKRTQRRKRKQNAQVMKQHQFEKQRKLYHAGSFTNSQSYVRSEIHHHLSQHFSGTIGTPVAPYTPVAPYTGPFW
Function		FRIGIDA-like protein 3 [UniProtKB/Swiss-Prot:Q67ZB3]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_03G0378300	OsZS97_03T0378300.1	Chr03	23829084	23832337	+	makerRMon
CDS seq	ATGGTGGTGTCCGATTCCCCGAAACCCCAACCAACCCCCTCGCCGCCGGCGCCACCCCCACTTCCGGTCCCGGCGGCGGCGGGGACGACGATGGGGGAGCTGGAGGCGGCCATCGAGGCGCTCGCCGCCAAGAAGCTGCGCCTCCGCGAGGCCTTCGACTGCCTCGTCGCCTGCTCCCCCATCCCCATCCCCTTCCGCTGGGACGACATCGACGCCCACGTCTCGTCCATCCAGTCCTCCATCGCCGGCCGCTTCCGCCAGTTCCAGGCGCTCCAGACCGCCGCCACCGCTGGAATAACGGCGGCCCCGGCCACCAGCAACGCCAGCAGCCGCGTCGAGCGTTCGGTCGAACACCTTGTGGTGGTGGTGGAGGGCCAAGAGTCCCACGTCGCGCGCCATGAGGACGGTGGAAACGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGGGCTAGGCAAGGAGGTGGCTATGGACGTAGAATCCGAGGAGGAGAACGGCATGGTGGTGGAGGTGGCAAGCGAGGCGCCTCGCGGAAAAGACGGTGAGGTGAAGGAGGAGGACGAGAAGATGGGGGGGCCAATCAATGCGTCTCCTCCTAGCGAAGAAATCCATGGGAAGGGCGCGGACATGTCGAGAAGATGGGGGAATCCCATGGAAATGTCGGCCGACGTGGACGATGCGAAGACCAAGACGACGGCGACGGCGGCGGCGGCGGAACTGACGGCGATGGCGATCTCTCCGATTCCGGGATTCACAGGCAGAGGGGGCGCGGAGGCGTCGCTGAGGCGGTCTCTCGCGGCGGCGTGCGCGAGCATGGACTCGTCGAGCCTGGCGCGCATCCTGTGCTCGTCCGGCAGCAGCAGCAGCAGCCACGCCACCCTCGCCGCACGTCACTTCCGCCCGGCGCTTCTCGCCGCCGCCGAACCCGCGGCGCTCGTCGTCCGCGCCGTCAGGGACCTGCTGGCCGGGACGGCGCCCATCAGGGACAGCGCGTGGGAGAGCTGCGTGGAGCTGCTCAGCTGCGTGCCCAAGCTCGCCGTGGCGCCGTCGCCGGGCACGATGGAGCAGGCCAATCGCTTGGCCGAGGACTGGAAGGAGATGATCGGGAGGACCGAAAGTTGCAGCATGAACCTCGGCCGGTTGGCTGTATGGGGCCTTCTCAACTTTCTTGTCTCCTACAACATTGTCCTGGAGTTCGACGCGGAAGAAATCATCCATTTCTTTGGCACTCTCCCGGACGACAAGAAGCAGTGTTGCATCTCCCTCTGCAAGTATCTTGGACTGATTGACAAGATGGCTGATTCAGTTGGTCATTTGATTGAACATGGACAACAACTTGTCGCTATCAGATTGGCATGCACTTTGAATTTGACAGACAAATACACTCCACTTTCCATCATGGAAGACTATATTCAGAATGCTAAGGAGACTGCTCAAGAGATACTGAGCATGGAAAGTGATTCAGAGTCACTGAAACTGTCCATGTCAAAGCAGGTCAATGCTCTAATATTGTCATGGAGGGTTGGTGGTGAATGCAATATTGACTCTGTCCATTGTGATAGAATTAAGGCAGAAATTACCCAGCTGTTGCATAAATATGCAAACAAGAGGCACAGCCTAGAAGAACTTCCTTCTGATACTTCTAGTCCACATCAGAAACATCACCAAATGTCGCAAGAGCAGCACCACTGGCAGCAAAAGCATCGAGAGGAACAACAGCAGCAGTTTCAAAATCAATCCAAGGAACAAGAACAAGAGAGAAGGATGCATAAGTTACGAGAGCTGAGGAAAAAGAAAAACAAGAGAACTCAGCGCAGGAAGCGGAAGCAAAATGCACAAGTGATGAAGCAGCATCAATTTGAGAAACAGCGAAAACTATATCACGCTGGTTCATTTACCAATTCTCAAAGCTATGTCAGATCAGAAATTCACCACCACCTCAGCCAGCATTTTTCAGGAACTATAGGAACACCTGTTGCACCATATACACCTGTTGCACCATATACCGGACCTTTTTGGTAG More
Protein seq	MVVSDSPKPQPTPSPPAPPPLPVPAAAGTTMGELEAAIEALAAKKLRLREAFDCLVACSPIPIPFRWDDIDAHVSSIQSSIAGRFRQFQALQTAATAGITAAPATSNASSRVERSVEHLVVVVEGQESHVARHEDGGNGEGEGEGEGEGEGEGGLGKEVAMDVESEEENGMVVEVASEAPRGKDGEVKEEDEKMGGPINASPPSEEIHGKGADMSRRWGNPMEMSADVDDAKTKTTATAAAAELTAMAISPIPGFTGRGGAEASLRRSLAAACASMDSSSLARILCSSGSSSSSHATLAARHFRPALLAAAEPAALVVRAVRDLLAGTAPIRDSAWESCVELLSCVPKLAVAPSPGTMEQANRLAEDWKEMIGRTESCSMNLGRLAVWGLLNFLVSYNIVLEFDAEEIIHFFGTLPDDKKQCCISLCKYLGLIDKMADSVGHLIEHGQQLVAIRLACTLNLTDKYTPLSIMEDYIQNAKETAQEILSMESDSESLKLSMSKQVNALILSWRVGGECNIDSVHCDRIKAEITQLLHKYANKRHSLEELPSDTSSPHQKHHQMSQEQHHWQQKHREEQQQQFQNQSKEQEQERRMHKLRELRKKKNKRTQRRKRKQNAQVMKQHQFEKQRKLYHAGSFTNSQSYVRSEIHHHLSQHFSGTIGTPVAPYTPVAPYTGPFW More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_03G0378300	OsZS97_03T0378300.2	Chr03	23829084	23832337	+	makerRMon
CDS seq	ATGGTGGTGTCCGATTCCCCGAAACCCCAACCAACCCCCTCGCCGCCGGCGCCACCCCCACTTCCGGTCCCGGCGGCGGCGGGGACGACGATGGGGGAGCTGGAGGCGGCCATCGAGGCGCTCGCCGCCAAGAAGCTGCGCCTCCGCGAGGCCTTCGACTGCCTCGTCGCCTGCTCCCCCATCCCCATCCCCTTCCGCTGGGACGACATCGACGCCCACGTCTCGTCCATCCAGTCCTCCATCGCCGGCCGCTTCCGCCAGTTCCAGGCGCTCCAGACCGCCGCCACCGCTGGAATAACGGCGGCCCCGGCCACCAGCAACGCCAGCAGCCGCGTCGAGCGTTCGGTCGAACACCTTGTGGTGGTGGTGGAGGGCCAAGAGTCCCACGTCGCGCGCCATGAGGACGGTGGAAACGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGGGCTAGGCAAGGAGGTGGCTATGGACGTAGAATCCGAGGAGGAGAACGGCATGGTGGTGGAGGTGGCAAGCGAGGCGCCTCGCGGAAAAGACGGTGAGGTGAAGGAGGAGGACGAGAAGATGGGGGGGCCAATCAATGCGTCTCCTCCTAGCGAAGAAATCCATGGGAAGGGCGCGGACATGTCGAGAAGATGGGGGAATCCCATGGAAATGTCGGCCGACGTGGACGATGCGAAGACCAAGACGACGGCGACGGCGGCGGCGGCGGAACTGACGGCGATGGCGATCTCTCCGATTCCGGGATTCACAGGCAGAGGGGGCGCGGAGGCGTCGCTGAGGCGGTCTCTCGCGGCGGCGTGCGCGAGCATGGACTCGTCGAGCCTGGCGCGCATCCTGTGCTCGTCCGGCAGCAGCAGCAGCAGCCACGCCACCCTCGCCGCACGTCACTTCCGCCCGGCGCTTCTCGCCGCCGCCGAACCCGCGGCGCTCGTCGTCCGCGCCGTCAGGGACCTGCTGGCCGGGACGGCGCCCATCAGGGACAGCGCGTGGGAGAGCTGCGTGGAGCTGCTCAGCTGCGTGCCCAAGCTCGCCGTGGCGCCGTCGCCGGGCACGATGGAGCAGGCCAATCGCTTGGCCGAGGACTGGAAGGAGATGATCGGGAGGACCGAAAGTTGCAGCATGAACCTCGGCCGGTTGGCTGTATGGGGCCTTCTCAACTTTCTTGTCTCCTACAACATTGTCCTGGAGTTCGACGCGGAAGAAATCATCCATTTCTTTGGCACTCTCCCGGACGACAAGAAGCAGTGTTGCATCTCCCTCTGCAAGTATCTTGGACTGATTGACAAGATGGCTGATTCAGTTGGTCATTTGATTGAACATGGACAACAACTTGTCGCTATCAGATTGGCATGCACTTTGAATTTGACAGACAAATACACTCCACTTTCCATCATGGAAGACTATATTCAGAATGCTAAGGAGACTGCTCAAGAGATACTGAGCATGGAAAGTGATTCAGAGTCACTGAATTAA More
Protein seq	MVVSDSPKPQPTPSPPAPPPLPVPAAAGTTMGELEAAIEALAAKKLRLREAFDCLVACSPIPIPFRWDDIDAHVSSIQSSIAGRFRQFQALQTAATAGITAAPATSNASSRVERSVEHLVVVVEGQESHVARHEDGGNGEGEGEGEGEGEGEGGLGKEVAMDVESEEENGMVVEVASEAPRGKDGEVKEEDEKMGGPINASPPSEEIHGKGADMSRRWGNPMEMSADVDDAKTKTTATAAAAELTAMAISPIPGFTGRGGAEASLRRSLAAACASMDSSSLARILCSSGSSSSSHATLAARHFRPALLAAAEPAALVVRAVRDLLAGTAPIRDSAWESCVELLSCVPKLAVAPSPGTMEQANRLAEDWKEMIGRTESCSMNLGRLAVWGLLNFLVSYNIVLEFDAEEIIHFFGTLPDDKKQCCISLCKYLGLIDKMADSVGHLIEHGQQLVAIRLACTLNLTDKYTPLSIMEDYIQNAKETAQEILSMESDSESLN More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_03G0378300	OsZS97_03T0378300.3	Chr03	23829084	23832337	+	makerRMon
CDS seq	ATGGTGGTGTCCGATTCCCCGAAACCCCAACCAACCCCCTCGCCGCCGGCGCCACCCCCACTTCCGGTCCCGGCGGCGGCGGGGACGACGATGGGGGAGCTGGAGGCGGCCATCGAGGCGCTCGCCGCCAAGAAGCTGCGCCTCCGCGAGGCCTTCGACTGCCTCGTCGCCTGCTCCCCCATCCCCATCCCCTTCCGCTGGGACGACATCGACGCCCACGTCTCGTCCATCCAGTCCTCCATCGCCGGCCGCTTCCGCCAGTTCCAGGCGCTCCAGACCGCCGCCACCGCTGGAATAACGGCGGCCCCGGCCACCAGCAACGCCAGCAGCCGCGTCGAGCGTTCGGTCGAACACCTTGTGGTGGTGGTGGAGGGCCAAGAGTCCCACGTCGCGCGCCATGAGGACGGTGGAAACGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGGGCTAGGCAAGGAGGTGGCTATGGACGTAGAATCCGAGGAGGAGAACGGCATGGTGGTGGAGGTGGCAAGCGAGGCGCCTCGCGGAAAAGACGGTGAGGTGAAGGAGGAGGACGAGAAGATGGGGGGGCCAATCAATGCGTCTCCTCCTAGCGAAGAAATCCATGGGAAGGGCGCGGACATGTCGAGAAGATGGGGGAATCCCATGGAAATGTCGGCCGACGTGGACGATGCGAAGACCAAGACGACGGCGACGGCGGCGGCGGCGGAACTGACGGCGATGGCGATCTCTCCGATTCCGGGATTCACAGGCAGAGGGGGCGCGGAGGCGTCGCTGAGGCGGTCTCTCGCGGCGGCGTGCGCGAGCATGGACTCGTCGAGCCTGGCGCGCATCCTGTGCTCGTCCGGCAGCAGCAGCAGCAGCCACGCCACCCTCGCCGCACGTCACTTCCGCCCGGCGCTTCTCGCCGCCGCCGAACCCGCGGCGCTCGTCGTCCGCGCCGTCAGGGACCTGCTGGCCGGGACGGCGCCCATCAGGGACAGCGCGTGGGAGAGCTGCGTGGAGCTGCTCAGCTGCGTGCCCAAGCTCGCCGTGGCGCCGTCGCCGGGCACGATGGAGCAGGCCAATCGCTTGGCCGAGGACTGGAAGGAGATGATCGGGAGGACCGAAAGTTGCAGCATGAACCTCGGCCGGTTGGCTGTATGGGGCCTTCTCAACTTTCTTGTCTCCTACAACATTGTCCTGGAGTTCGACGCGGAAGAAATCATCCATTTCTTTGGCACTCTCCCGGACGACAAGAAGCAGTGTTGCATCTCCCTCTGCAAGTATCTTGGACTGATTGACAAGATGGCTGATTCAGTTGGTCATTTGATTGAACATGGACAACAACTTGTCGCTATCAGATTGGCATGCACTTTGAATTTGACAGACAAATACACTCCACTTTCCATCATGGAAGACTATATTCAGAATGCTAAGGAGACTGCTCAAGAGATACTGAGCATGGAAAGTGATTCAGAGTCACTGGTCAATGCTCTAATATTGTCATGGAGGGTTGGTGGTGAATGCAATATTGACTCTGTCCATTGTGATAGAATTAAGGCAGAAATTACCCAGCTGTTGCATAAATATGCAAACAAGAGGCACAGCCTAGAAGAACTTCCTTCTGATACTTCTAGTCCACATCAGAAACATCACCAAATGTCGCAAGAGCAGCACCACTGGCAGCAAAAGCATCGAGAGGAACAACAGCAGCAGTTTCAAAATCAATCCAAGGAACAAGAACAAGAGAGAAGGATGCATAAGTTACGAGAGCTGAGGAAAAAGAAAAACAAGAGAACTCAGCGCAGGAAGCGGAAGCAAAATGCACAAGTGATGAAGCAGCATCAATTTGAGAAACAGCGAAAACTATATCACGCTGGTTCATTTACCAATTCTCAAAGCTATGTCAGATCAGAAATTCACCACCACCTCAGCCAGCATTTTTCAGGAACTATAGGAACACCTGTTGCACCATATACACCTGTTGCACCATATACCGGACCTTTTTGGTAG More
Protein seq	MVVSDSPKPQPTPSPPAPPPLPVPAAAGTTMGELEAAIEALAAKKLRLREAFDCLVACSPIPIPFRWDDIDAHVSSIQSSIAGRFRQFQALQTAATAGITAAPATSNASSRVERSVEHLVVVVEGQESHVARHEDGGNGEGEGEGEGEGEGEGGLGKEVAMDVESEEENGMVVEVASEAPRGKDGEVKEEDEKMGGPINASPPSEEIHGKGADMSRRWGNPMEMSADVDDAKTKTTATAAAAELTAMAISPIPGFTGRGGAEASLRRSLAAACASMDSSSLARILCSSGSSSSSHATLAARHFRPALLAAAEPAALVVRAVRDLLAGTAPIRDSAWESCVELLSCVPKLAVAPSPGTMEQANRLAEDWKEMIGRTESCSMNLGRLAVWGLLNFLVSYNIVLEFDAEEIIHFFGTLPDDKKQCCISLCKYLGLIDKMADSVGHLIEHGQQLVAIRLACTLNLTDKYTPLSIMEDYIQNAKETAQEILSMESDSESLVNALILSWRVGGECNIDSVHCDRIKAEITQLLHKYANKRHSLEELPSDTSSPHQKHHQMSQEQHHWQQKHREEQQQQFQNQSKEQEQERRMHKLRELRKKKNKRTQRRKRKQNAQVMKQHQFEKQRKLYHAGSFTNSQSYVRSEIHHHLSQHFSGTIGTPVAPYTPVAPYTGPFW More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.3829785	0.178862	2.472593

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_03g0588600	RBH	0.0	0.0	0.459302
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os03g39160	RBH	0.0	0.0	0.118581
Nipponbare \| IRGSP 1.0 \| RAP-db	Os03g0588600	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_03g0024960	RBH	0.0	0.000000	0.215971
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_03g0024750	RBH	0.0	0.0	0.0
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_03g0024810	RBH	0.0	0.0	0.763743
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_03g0024860	RBH	0.0	0.000000	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_03g0024570	RBH	0.000000	1.560365	2.685428
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_03G0376900	RBH	0.1693485	0.1078025	0.965678
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_03g0024350	RBH	0.0	0.0	0.000000
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_03G0377700	RBH	5.891428	12.1909165	9.742164
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_03g0024640	RBH	0.0	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_03g0024670	RBH	0.0	0.000000	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_03g0024750	RBH	0.0	0.0	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_03g0024520	RBH	0.0	0.0	0.102263
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_03g0024410	RBH	0.0	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_03G024490	RBH	0.0	0.000000	0.000000
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_03g0024460	RBH	0.0	0.0	0.693693

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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