Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_03G0179300 OGI:03028270 | 12/16 Zhenshan 97 | ZS97RS3 | HZAU Chr03:10772313-10772739
Gene Symbol -
DNA seq

ATGGCGGCCTCGATGGACGGGTTCCCCATGAACCTCTTGAACTCCTCGTCCGACCTCCAGTCAACCTCCTACTGCTCCACCGCGCCGGCATGGGCCTCCCCGCCGGCAGCCATTCCTCCAGGGGACTGGATTTCCCATGTCTTGGCAGTTACAGTCGAACTCCGCATTTCCAAACCAGGGCACTGCAAATAGGAGGCTCATGCTACAACTATCAGAATCATTATCTCCCAAATTTGATGCGAGCATGACTAGAGATGAGTGTGAAGATGAGGAACCAGGCATTGTTGTAACTTCGAAGTATGTGAATGAAGCTACTGAGGAGTCAACTGCAGAAAAGGATATGCCTTCTGATGGAGATGATGCTGAGCCAACGGGTATTACTATCGAGCTGGTGTGGGACAACGGCACGCCCTTCCCGGAGCCCTGA

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CDS seq

ATGGCGGCCTCGATGGACGGGTTCCCCATGAACCTCTTGAACTCCTCGTCCGACCTCCAGTCAACCTCCTACTGCTCCACCGCGCCGGCATGGGCCTCCCCGCCGGCAGCCATTCCTCCAGGGGACTGGATTTCCCATGGCACTGCAAATAGGAGGCTCATGCTACAACTATCAGAATCATTATCTCCCAAATTTGATGCGAGCATGACTAGAGATGAGTGTGAAGATGAGGAACCAGGCATTGTTGTAACTTCGAAGTATGTGAATGAAGCTACTGAGGAGTCAACTGCAGAAAAGGATATGCCTTCTGATGGAGATGATGCTGAGCCAACGGGTATTACTATCGAGCTGGTGTGGGACAACGGCACGCCCTTCCCGGAGCCCTGA

Protein seq

MAASMDGFPMNLLNSSSDLQSTSYCSTAPAWASPPAAIPPGDWISHGTANRRLMLQLSESLSPKFDASMTRDECEDEEPGIVVTSKYVNEATEESTAEKDMPSDGDDAEPTGITIELVWDNGTPFPEP

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_03G0179300 OsZS97_03T0179300.1 Chr03 10772313 10772739 + makerRMon
CDS seq

ATGGCGGCCTCGATGGACGGGTTCCCCATGAACCTCTTGAACTCCTCGTCCGACCTCCAGTCAACCTCCTACTGCTCCACCGCGCCGGCATGGGCCTCCCCGCCGGCAGCCATTCCTCCAGGGGACTGGATTTCCCATGGCACTGCAAATAGGAGGCTCATGCTACAACTATCAGAATCATTATCTCCCAAATTTGATGCGAGCATGACTAGAGATGAGTGTGAAGATGAGGAACCAGGCATTGTTGTAACTTCGAAGTATGTGAATGAAGCTACTGAGGAGTCAACTGCAGAAAAGGATATGCCTTCTGATGGAGATGATGCTGAGCCAACGGGTATTACTATCGAGCTGGTGTGGGACAACGGCACGCCCTTCCCGGAGCCCTGA

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Protein seq

MAASMDGFPMNLLNSSSDLQSTSYCSTAPAWASPPAAIPPGDWISHGTANRRLMLQLSESLSPKFDASMTRDECEDEEPGIVVTSKYVNEATEESTAEKDMPSDGDDAEPTGITIELVWDNGTPFPEP

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.5308385 0.656428 2.730591

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g18729 RBH 0.000000 0.0 0.000000
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0014300 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0014090 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0014000 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0014250 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0014230 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0014310 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0014140 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0014110 RBH 0.0 4.039360 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G014050 RBH 0.0 0.0 0.117094
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0013960 RBH 0.0 0.000000 1.348650
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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