Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_02G0545600 | OGI:02089320 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr02:32897938-32903238 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGCGCCTCCCGGTGCTACTCCCGCTGCTGCTGCTGCTGCTCGCCGCGGCAGCGGCGGTGGCGGCGGCGGAAGCGGCGACGCTGTCGGCGAGGATGGTGCACCGGCTGTCCGACGAGGCTCGGCTCGCGGCGGGCGCGCGTGGGGGGCGGCGCTGGCCCCGTCGCGGGAGCGGGGATTACTTCCGCGCGCTGGTGCGGAGCGACCTCCAGCGGCAGAAGCGGCGGGTCGGCGGCAAGTACCAGCTCCTCTCCCTCTCCCAGGGCGGCAGTATCTTCCCCTCCGGCAACGACTTGGGCTGGTGAGCTACACTTCCTGCCTGGGCTACGGTCTCGCCCCTCTAGCCCCCTTCGGATCTTACTGCATTTCTTCCTCAGCATTTTTAATCTTCTGTTGTACTGTAGATGCAGTAGCATCTCTTCGCAAGTTCACATGCTGTAGTAGTTCAGTTACTTCAGTAGTGCTATAGGACAGCCGATATAGAACAATGCGCTACTATTTTATCACAAACTTTTGTAGTATTTCTCGTTGTGTAGTATGGGTTACATTGTGAATTTGTGATGGGCCAAGCAGCCTTGTGCAGAGTCAGTCGTGCTTAGGTTGCGCTCTGAGTTGTGGAGTTTCTTCTGTCTTTGGATGGATGTGCAGGTTATACTACACTTGGGTGGACGTTGGGACGCCAAATACTTCCTTCCTGGTCGCATTGGATACTGGAAGTGACTTGTTTTGGGTGCCTTGTGATTGTATCCAATGTGCGCCATTGTCCAGCTACCATGGAAGTTTGGTATGCATCTCTTTGTGATCAGTAACGTCATGTTAAGGATATACCGATGCTCTATATGGGGGATATTCGTGGCAATGTTAACAGATTATCAAATTTGTTTCCTAAGAAATTATTTCTTTTCTCATGGTTTGACTAATAATAAAATTGCTGTCGCGGAGGGTCTGTTTAGATTGGTGTCATTTTAAACCATACCATTATTCGGTAAAATTAACAATCATATGTCTGCATTTAGTTTTCTACCAAACATTGGTAATATCTAGAGAATTTTGGCAATATCACATTTAATCCATATAAAAAACTTGGCAATGTTGTCAACTTGCTAAAATTTTGGTATTGTCAAATTTTAGAATGGTTTATTTTGGCAGCAAGCTGAACATGCCTGGAATATACACCATAGGTCTATGAAGTCTTAATAAGTAAAACATGCAATCATTACATGAATTTGAACAAGCAATTCAGTAGCATATATGTTTCGCTATTACTTTTATTGATTCTTGTAATTATTCTGCCAGACCTGTGAACATGCAAATTATATTACTCAATTTCACTCTTAATTTATCTAAATTTGCTGATGTTGGAAATATAAGTACAAATCTAATGCTGATCATAAATTATTGAACATTTCAATAGATCAGTCTAGTAGGTTGGGTACCCACTAAATAGAGACTAGGTGGCAACTAGGTGGGTCTAAGTGGTGACTAGACTGGGGGATGTTGCTGGCGACTAGCCGTTAGTTGCAGCCTAGGCAGCCGTCCTGGTGAACTCTGCAATAAATACAATGCAAATAAGTTTCAGACCAAGATGCAGTAGCTGTTTTGGCACTCTCAGGTCAGGTAAAACTAATTTTCCCCATATTGTCCACTCAGATGATCAAAAACAATTTAGACTGCAATTTTTAGCTAAGAGGCAAGTTTAGGGAATACTCCCTCCATCCACAAAAGTTAGACATATTTCACATTTGAGCTTTTCCAAATAAGTTGTTCCTATTTGTAGTCTTTATGCATCCAAGACTTAAATGAATAGATAAATTAAATGTTTGATTAGAACCCAAGGAGTTATCTAAATACTCATTGGTTGCATGCTTGCATTCACTCCTTGATTTTGTAACATGCAAGGTGATTTAATTTCTCCTTGGTCTTGATGACAAAAGTAATATGTGTAACTTTTGTGGATGGAGAGAGTAACACTTAGTTACGGGATTGCAGGTCTACGAAGTTGATCTTCAAGTTTAGGAACCCAAATGGCAGTTTGTTAGAGGTTACTTAGTTTGTTAATTCTAAATTTCTTATGATGCTAAGTAGTATATATGAAGCACACAAACAAGAGGAATTTGTTTTATATTTTAAAGCAGGTTTAGCACTTATTTGGAATAATTGATTGGCAGGTGCTCCGTCATATGTGGAGCATCTATTATGCAGGATAGAGATCTTGGGATTTACAAGCCATCTGAATCAACTACAAGTCGGCATCTGCCCTGTAGCCATGAGCTTTGCTCACCGGCTTCAGGTTGCACAAACCCGAAGCAGCCTTGTCCATACAATATTGACTACTTTTCAGAAAATACAACCAGCTCCGGTTTGCTAATTGAAGATATGTTACACTTGGATTCTAGGGAGGGCCATGCACCTGTGAATGCTTCTGTCATTATAGGGTATGCTTCTTTGTCTTCTGCCCTTTTTTTTAACATTAACTATTGCTGGAGCAATAATAATTATCAGATTGCTTATTTCCTACTAGGGCATTCTAATTGAACAACAATACAATCACCTGCGCGCATGGTCGCATGTTTACTTGTACATGTACTGATATGTCAGGTAGCAGCATGCATCTGCATATAGAATGAAATAATTCCATTTTTAAACCCCTAAACTTTGCCGAATGTTCAATTGACACTCAACTATAAAATCATTTAACCCTAAAGTTAGAAAGCAAGGTGAGCTTACTCCCTAAGGTGGTCTCAGTGGGTGCTTTTGACATTGCTGTTAACATGGAAAATAACTCTACTGATCCACCTTCCAAAAGAACCATGCTTGCCTTAGGCCTTGTGTACATAGGTGGCGGTTAGGCCCTATCCTTTCCGTCTTTAAACTAGAAGTGTTAATTACCTTTATAATATTATCTCGTGGCATTATCGATACAACAAGTCATGAATGTACTCCTAGAACAAAAATGATACAAACTAGATGTTGTGCTCTAGTATGAAACACCTCTAGTTTAATGATTAGTTTGCTTAATGAAATTTACAACTTCATTAACATAGTGTGTATCCCTGTGTACAGCTGTGGTAAAAAGCAGAGTGGTAGCTATTTGGAAGGTATTGCACCAGATGGACTTCTTGGTCTTGGAATGGCAGATATCTCAGTACCTAGTTTCCTTGCAAGAGCTGGATTAGTACGAAATTCCTTTTCAATGTGTTTCAAGAAAGATGATTCTGGGAGAATTTTCTTTGGTGATCAAGGAGTACCTACCCAACAGTCTACACCATTTGTCCCGATGAATGGCAAGCTGTGAGTACCCCACAGGAATAGATATGTGTAGCAATACCATTAGTTTCTATTCTCTATTTTATGTTATCCATTTTGGGGGGGTCAAGCCATGTCCACTTTATATTGGAAGCAATGGATGTACTTCTTGACAGTTCCACTCACATGCTTTCTCCTTTTTTTTTCAGTCAGACTTATGCTGTTAATGTTGACAAATATTGTATTGGACATAAGTGTACGGAGGGAGCTGGCTTCCAGGCATTAGTAGACACTGGAACATCCTTCACCAGTCTTCCCCTCGATGCCTACAAGAGTATCACTATGGAGGTAAATATCTACTCCTTCGGAGGAATTCTTTTGGTGGATATCGCCTGTGCTTATTTATCATGAATTCATGATTCTGCAGTTCGACAAACAAATCAATGCATCAAGAGCATCTTCTGATGATTATTCTTTCGAATATTGCTACAGCACCGGGTAATTTTATTTTGAAATAATTGCTTCTGTTCCATTTTTGTGAGTAATATCAGACAAGCTAACCTAGCCCAAAAACAAAAAATCAAACAAGTTAAGATGGTGCAACCACTTAGTTTCTGCCACTTCTGATTTTATGAGTTGTTTGTTGCAGTCCTCTTGAGATGCCTGATGTTCCAACTATAACTCTGACTTTTGCTGAGAACAAGAGTTTCCAGGCTGTTAATCCTATACTTCCATTTAATGACAGACAGGTATGTACTTGAGTTGTAAAAAAATATCAGGCACTAGCACCAAAAACAGTCAGTTAAGGGTCATATTGAGTCATGTTGTGTATTGTGATCTATGCTTAGAAATTCCAAGTGTCTTCTTTTCCGCTACACTTTATTTCTCAAGTCCGTGCTCTTGACTCTTGAGTCTTGGAACTCATATCTGGCTTCATTTAGCTTCTTTCATAATCAAAAATAGATATATATAGGGCCATCCAAGCTAGCTGGAAGTACATTCTTTTCTTCTAAACATATATGTCCACCCGCACAGTTGTTAAATACTCGTGTTCCCATTTGATATAGCATTATGAATCTTATAGACATGGCTCAGTGGTTTTGACTGTTGTGCTGGGAGTAAAATGCTAATCGTTACTACACTCTGTTATTTCATAAATAGGTTTAAATAGGGTATCAATGCCGACATTCCTTTTAAAGTTTTTTTGGGCAAAATGGCATGTATGAATGTGATGCTTAATGATTTCTACTAGAATACTACTACTGAAATTTTAGGATTTCCTAGGTTCATTTTTTTGAACTTAGTAATTTTGTCCTTGTTGCATCTGCATGCTACACATATTGAACTCCCATGATTTGTTATTCCACCGCCAAGGGTTTGACAAAACCAAACTCTAGTAAGAATTACCAGTAGAAACCCATGTTACATTTGGAGCTGACACCTTAGGTATGATGATTAGTGCATCAACTCATACAAAATTAAAACCGTAGGTTATTAGCTGGATGTTGATGTTGTCTTGTTTTATTTATTTTTACAGGGAGAATTTGCTGTCTTTTGCTTAGCAGTACTACCATCACCTGAACCTGTTGGGATTATTGGGCGTGAGTACTTATCTTTATATTGAAAAATCAATTGTTTTTGGTATTTTATGTTCTCTTACGAGACAATACTATCGAATGCAGAGAATTTCATGGTTGGCTATCACGTAGTTTTTGACAGAGAAAATATGAAGCTGGGCTGGTACCGCTCTGAATGTAAGCCAGAACCATGCCACAATAAATACCACAAAACTTCTAACTACGACGTTAATACGTTTCTGATCATCGTGATTTGCAGGCCATGATCTTGACAACAGCACGATGGTGTCCTTAGGTCCATCACAGCATAACAGTCCAGAGGACCCCCTACCGTCAAACGAGCAGCAGACCTCTCCGGCTGTCACGCCGGCTGTCGCAGGCAGGGCTCCGTCCTCTGGCGGATCGACGACTCTGCAGAACCTACTTGCTAACTCTAACATGCTGCTCTTACTGACTATGTCCGTGTTCTTCATCTCATGA
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| CDS seq | ATGCGCCTCCCGGTGCTACTCCCGCTGCTGCTGCTGCTGCTCGCCGCGGCAGCGGCGGTGGCGGCGGCGGAAGCGGCGACGCTGTCGGCGAGGATGGTGCACCGGCTGTCCGACGAGGCTCGGCTCGCGGCGGGCGCGCGTGGGGGGCGGCGCTGGCCCCGTCGCGGGAGCGGGGATTACTTCCGCGCGCTGGTGCGGAGCGACCTCCAGCGGCAGAAGCGGCGGGTCGGCGGCAAGTACCAGCTCCTCTCCCTCTCCCAGGGCGGCAGTATCTTCCCCTCCGGCAACGACTTGGGCTGGTTATACTACACTTGGGTGGACGTTGGGACGCCAAATACTTCCTTCCTGGTCGCATTGGATACTGGAAGTGACTTGTTTTGGGTGCCTTGTGATTGTATCCAATGTGCGCCATTGTCCAGCTACCATGGAAGTTTGGATAGAGATCTTGGGATTTACAAGCCATCTGAATCAACTACAAGTCGGCATCTGCCCTGTAGCCATGAGCTTTGCTCACCGGCTTCAGGTTGCACAAACCCGAAGCAGCCTTGTCCATACAATATTGACTACTTTTCAGAAAATACAACCAGCTCCGGTTTGCTAATTGAAGATATGTTACACTTGGATTCTAGGGAGGGCCATGCACCTGTGAATGCTTCTGTCATTATAGGCTGTGGTAAAAAGCAGAGTGGTAGCTATTTGGAAGGTATTGCACCAGATGGACTTCTTGGTCTTGGAATGGCAGATATCTCAGTACCTAGTTTCCTTGCAAGAGCTGGATTAGTACGAAATTCCTTTTCAATGTGTTTCAAGAAAGATGATTCTGGGAGAATTTTCTTTGGTGATCAAGGAGTACCTACCCAACAGTCTACACCATTTGTCCCGATGAATGGCAAGCTTCAGACTTATGCTGTTAATGTTGACAAATATTGTATTGGACATAAGTGTACGGAGGGAGCTGGCTTCCAGGCATTAGTAGACACTGGAACATCCTTCACCAGTCTTCCCCTCGATGCCTACAAGAGTATCACTATGGAGTTCGACAAACAAATCAATGCATCAAGAGCATCTTCTGATGATTATTCTTTCGAATATTGCTACAGCACCGGTCCTCTTGAGATGCCTGATGTTCCAACTATAACTCTGACTTTTGCTGAGAACAAGAGTTTCCAGGCTGTTAATCCTATACTTCCATTTAATGACAGACAGGGAGAATTTGCTGTCTTTTGCTTAGCAGTACTACCATCACCTGAACCTGTTGGGATTATTGGGCAGAATTTCATGGTTGGCTATCACGTAGTTTTTGACAGAGAAAATATGAAGCTGGGCTGGTACCGCTCTGAATGCCATGATCTTGACAACAGCACGATGGTGTCCTTAGGTCCATCACAGCATAACAGTCCAGAGGACCCCCTACCGTCAAACGAGCAGCAGACCTCTCCGGCTGTCACGCCGGCTGTCGCAGGCAGGGCTCCGTCCTCTGGCGGATCGACGACTCTGCAGAACCTACTTGCTAACTCTAACATGCTGCTCTTACTGACTATGTCCGTGTTCTTCATCTCATGA
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| Protein seq | MRLPVLLPLLLLLLAAAAAVAAAEAATLSARMVHRLSDEARLAAGARGGRRWPRRGSGDYFRALVRSDLQRQKRRVGGKYQLLSLSQGGSIFPSGNDLGWLYYTWVDVGTPNTSFLVALDTGSDLFWVPCDCIQCAPLSSYHGSLDRDLGIYKPSESTTSRHLPCSHELCSPASGCTNPKQPCPYNIDYFSENTTSSGLLIEDMLHLDSREGHAPVNASVIIGCGKKQSGSYLEGIAPDGLLGLGMADISVPSFLARAGLVRNSFSMCFKKDDSGRIFFGDQGVPTQQSTPFVPMNGKLQTYAVNVDKYCIGHKCTEGAGFQALVDTGTSFTSLPLDAYKSITMEFDKQINASRASSDDYSFEYCYSTGPLEMPDVPTITLTFAENKSFQAVNPILPFNDRQGEFAVFCLAVLPSPEPVGIIGQNFMVGYHVVFDRENMKLGWYRSECHDLDNSTMVSLGPSQHNSPEDPLPSNEQQTSPAVTPAVAGRAPSSGGSTTLQNLLANSNMLLLLTMSVFFIS |
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| Function | Aspartic proteinase-like protein 1 [UniProtKB/Swiss-Prot:Q9LX20] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_02G0545600 | OsZS97_02T0545600.1 | Chr02 | 32897938 | 32903238 | + | makerRMon | ||
| CDS seq | ATGCGCCTCCCGGTGCTACTCCCGCTGCTGCTGCTGCTGCTCGCCGCGGCAGCGGCGGTGGCGGCGGCGGAAGCGGCGACGCTGTCGGCGAGGATGGTGCACCGGCTGTCCGACGAGGCTCGGCTCGCGGCGGGCGCGCGTGGGGGGCGGCGCTGGCCCCGTCGCGGGAGCGGGGATTACTTCCGCGCGCTGGTGCGGAGCGACCTCCAGCGGCAGAAGCGGCGGGTCGGCGGCAAGTACCAGCTCCTCTCCCTCTCCCAGGGCGGCAGTATCTTCCCCTCCGGCAACGACTTGGGCTGGTTATACTACACTTGGGTGGACGTTGGGACGCCAAATACTTCCTTCCTGGTCGCATTGGATACTGGAAGTGACTTGTTTTGGGTGCCTTGTGATTGTATCCAATGTGCGCCATTGTCCAGCTACCATGGAAGTTTGGATAGAGATCTTGGGATTTACAAGCCATCTGAATCAACTACAAGTCGGCATCTGCCCTGTAGCCATGAGCTTTGCTCACCGGCTTCAGGTTGCACAAACCCGAAGCAGCCTTGTCCATACAATATTGACTACTTTTCAGAAAATACAACCAGCTCCGGTTTGCTAATTGAAGATATGTTACACTTGGATTCTAGGGAGGGCCATGCACCTGTGAATGCTTCTGTCATTATAGGCTGTGGTAAAAAGCAGAGTGGTAGCTATTTGGAAGGTATTGCACCAGATGGACTTCTTGGTCTTGGAATGGCAGATATCTCAGTACCTAGTTTCCTTGCAAGAGCTGGATTAGTACGAAATTCCTTTTCAATGTGTTTCAAGAAAGATGATTCTGGGAGAATTTTCTTTGGTGATCAAGGAGTACCTACCCAACAGTCTACACCATTTGTCCCGATGAATGGCAAGCTTCAGACTTATGCTGTTAATGTTGACAAATATTGTATTGGACATAAGTGTACGGAGGGAGCTGGCTTCCAGGCATTAGTAGACACTGGAACATCCTTCACCAGTCTTCCCCTCGATGCCTACAAGAGTATCACTATGGAGTTCGACAAACAAATCAATGCATCAAGAGCATCTTCTGATGATTATTCTTTCGAATATTGCTACAGCACCGGTCCTCTTGAGATGCCTGATGTTCCAACTATAACTCTGACTTTTGCTGAGAACAAGAGTTTCCAGGCTGTTAATCCTATACTTCCATTTAATGACAGACAGGGAGAATTTGCTGTCTTTTGCTTAGCAGTACTACCATCACCTGAACCTGTTGGGATTATTGGGCAGAATTTCATGGTTGGCTATCACGTAGTTTTTGACAGAGAAAATATGAAGCTGGGCTGGTACCGCTCTGAATGCCATGATCTTGACAACAGCACGATGGTGTCCTTAGGTCCATCACAGCATAACAGTCCAGAGGACCCCCTACCGTCAAACGAGCAGCAGACCTCTCCGGCTGTCACGCCGGCTGTCGCAGGCAGGGCTCCGTCCTCTGGCGGATCGACGACTCTGCAGAACCTACTTGCTAACTCTAACATGCTGCTCTTACTGACTATGTCCGTGTTCTTCATCTCATGA
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| Protein seq | MRLPVLLPLLLLLLAAAAAVAAAEAATLSARMVHRLSDEARLAAGARGGRRWPRRGSGDYFRALVRSDLQRQKRRVGGKYQLLSLSQGGSIFPSGNDLGWLYYTWVDVGTPNTSFLVALDTGSDLFWVPCDCIQCAPLSSYHGSLDRDLGIYKPSESTTSRHLPCSHELCSPASGCTNPKQPCPYNIDYFSENTTSSGLLIEDMLHLDSREGHAPVNASVIIGCGKKQSGSYLEGIAPDGLLGLGMADISVPSFLARAGLVRNSFSMCFKKDDSGRIFFGDQGVPTQQSTPFVPMNGKLQTYAVNVDKYCIGHKCTEGAGFQALVDTGTSFTSLPLDAYKSITMEFDKQINASRASSDDYSFEYCYSTGPLEMPDVPTITLTFAENKSFQAVNPILPFNDRQGEFAVFCLAVLPSPEPVGIIGQNFMVGYHVVFDRENMKLGWYRSECHDLDNSTMVSLGPSQHNSPEDPLPSNEQQTSPAVTPAVAGRAPSSGGSTTLQNLLANSNMLLLLTMSVFFIS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.9278855 | 0.881118 | 31.354166 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0751100 | RBH | 0.0 | 0.000000 | 4.204826 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g51540 | RBH | 0.0 | 0.000000 | 0.608181 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0751100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0033860 | RBH | 0.0 | 1.357546 | 3.479100 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0033960 | RBH | 0.067154 | 0.000000 | 1.201276 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0033850 | RBH | 0.0 | 4.661708 | 3.836282 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0033430 | RBH | 0.0 | 0.076984 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0033510 | RBH | 0.0 | 13.717367 | 9.086035 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0515400 | RBH | 2.987232 | 3.7412965 | 71.6060985 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0033320 | RBH | 0.0 | 0.390942 | 0.855017 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0092700 | RBH | 1.041681 | 0.865473 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0033580 | RBH | 0.0 | 0.192976 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0033400 | RBH | 0.0 | 3.137508 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0033720 | RBH | 1.227351 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0033610 | RBH | 0.000000 | 0.471896 | 0.679799 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0033210 | RBH | 0.0 | 6.458224 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G033890 | RBH | 0.081109 | 1.884697 | 3.251890 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0033600 | RBH | 0.0 | 0.000000 | 3.338148 |
