Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_02G0436800		OGI:02071230 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr02:26422335-26425255		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		ARF7, OsARF7, ARF8, OsARF8
DNA seq		CGGTCCTCCACGCGCGGTTCTCCAACCTCGCTCTGGTCCTCGCCCTCCACTACCCCTCCCCCCCTCTACTACGCGAATCGCCACGCACCATCCGTGTCATCCCGCGGTTTTGCGCCTCTCGCCGAACGGCCCGCTTATAAGTCGCCCAACCGGCGGGGTTACCACGCATGTTACCGTGGGAACGGCAGCCAAAAGCCGCCACCACCAACCTCTCGTCTTCGCCTCCTCTCCCACCCCCTCACGACGAACACTCACACGGTCACACCACTACCCCTGCGAGATCGGTTGCTGGCGCTGCTGGTGGTGGTGGTGGTGGTGGGTGCGTGGCGATGATCACGTTCGCGGACCTGGCGGAGCCGGCGCCCGGCGCCGAGCGGTGCGTCGACCGGCAGCTGTGGCTGGCGTGCGCGGGGGGCATGTGCACCGTGCCGCCGGTGGGCGCCGCCGTGTACTACTTCCCGCAGGGGCACGCCGAGCACGCGCTCGGCCTCGCCGCGCCGGAGCTCTCCGCGGCGCGCGTCCCGGCGCTCGTGCCCTGCCGCGTCGCGTCCGTGCGGTACATGGCCGACCCGGACACCGACGAGGTGTTCGCCAGGATCCGCCTCGTGCCGCTCCGCGCCGCGGAGGATGGGGACGTCGAGGAGGATGGCGCCGCGGCAGGCGAGGAGCACGAGAAGCCGGCGTCGTTCGCCAAGACGCTGACGCAGTCGGATGCCAACAACGGCGGGGGGTTCTCGGTGCCCAGGTACTGCGCCGAGACCATCTTCCCGCGCCTGGACTACGCCGCCGACCCGCCCGTGCAGACCGTCGTCGCCAAGGACGTCCATGGAGTCGCCTGGAACTTCCGCCACATCTACCGGGGCACGCCGCGCCGGCACCTGCTCACCACGGGGTGGAGCACGTTCGTGAACCAGAAGAAGCTCGTGGCCGGCGACTCCATCGTGTTCCTCCGCGGCGACGGAGGGGACCTGCACGTCGGCATCCGGCGCGCCAAGCGCGGGTTTTGCGGCGGCGGAGGCGGAGCCGAGGAGGCCTCCCTGCCCGGGTGGGACCAGTACGGCGGCCTGATGCGAGGCAATGCGAGCCCGTGCGCGGCCGCCAAGGGGCGGGGCAAGGTGCGCGCGGAGGACGTCGTCGAGGCGGCGAGGCTGGCGAGCGGCGGGCAGCCGTTCGAGGTCGTGTACTACCCGCGCGCCAGCACGCCGGAGTTCTGCGTGCGCGCGGCGGCGGTCCGCGCGGCGATGCGGGTGCAGTGGTGCCCCGGGATGCGGTTCAAGATGGCGTTCGAGACCGAGGACTCCTCCCGGATCAGCTGGTTCATGGGCACCGTCGCCAGCGTCCAGGTCGCCGACCCCATCCGTTGGCCGCAGTCGCCGTGGCGGCTTCTCCAGGTACGGTACAACATCTACACCACCGCAAACCAATCAAAATTTTTTGCTCCTTTCTCACTTCCTGAATCAATGAACTCCAGGTGACCTGGGACGAACCGGACCTCCTCCAGAACGTGAAGCGGGTGAGCCCATGGCTGGTCGAGCTGGTGTCGAGCATGCCGGCCATCCACCTCTCGTCCTTCTCGCCGCCGCGCAAGAAGCCCCGGATTCCGGCGTACCCGGAGTTCCCCTTCGAGGGGCAGCTCCTCAACCCGGCGTTCCCGCCAAACCCGCTGGCACACGGCCACCACCATTACCATCACAACCACCCGTCCTTCTTCCCGTTCCCCGACGTTAGTGCTCCTGCAGGCATACAGGGAGCCAGGCATGCGCAATTTGGTCCATCTTTATCAGATCTCCACCTTACCCACCTGCAGTCGAGCCTCATGTACCCGGGGCTCCGCCGCCCCGATCATGTCGGTCCAACATCCATCCCGCCACCAAGAATCAGCACTGACCTGACAATGGGCAGCTCGCCGCCGGCGCGCGCTCTGTCCATGGGCGCCAAGAAGCCCGACGACGCCAAGCCGCCGGGGCTAATGCTGTTCGGGCAGAGGATACTGACCGAGCGCCAGATGAGCCTTAGCGGCACCACCTCGCCGGCGGCCACCGGGAACAGCTCTCTCAACTGGAACACCGAGAAAGGTGCCTCGGAGGGCTCGGGCTCCGGCGTCATCCAGAACAGCCCCACCGACAACACGTCGTCGGAGAGGCTCCAGTGGTTCAGGGAGAACAGCACCGTCTCCGAGCTCGGGCTGGAGCCCGGGCAGTGCAAGGTGTTCATCGAGTCCGACACGGTCGGCCGCAACCTCGACCTCTCGTCGCTGGCCTCGTTCGAGCAGCTCTACGGCCGGCTGTCCGAGATGTTCTGCATCGACAGCGCGGAGCTGAGGAGCCGTGTGCTCTACCGTGGCGCCACCGGCGAAGTGAGGCACGCCGGCGACGAGCCATTCAGGTGAGAAACACATCAAACAGCAACATAATAATGACAACATCCCATGCATCATGCATGTCATGTGCCCGCTGTTCGTGTTACAGTTGCAACGAATCATGTAGCGGGCAACCTTTGAACTGATGAAACAGTCTTTTTCCCTGACATTTCAGCGAGTTCATTAAGTTGGCGAGGAGGCTTACCATACTAACCGACGCCGGGAGCGACAACTTAGGGAGCTAGAGAGCAAAGAGGACAACCGGGAGCATCGCCGTAGTATGTACAGCTTGAATGAGCTTATGATTTTGTATCAACTAGTAGCAGTAGTAGCAGCACTAGTAATTTCCGTTCAACTAGTAATGTCCCCAACTCTGCAGTAGAGATTTCAACAAGAAAGCTCAATCTGCACAGGTATCCTACTGTTCTCCTGTATCCTTCTTCATCATCATCAACAACGATCAGCTGCGTGTACTTGTTGATTCCCGTGTACTACGATGCAAAAATCCTGTGACCACTCATCAGAGGCTTGAATGCCGCGGCCCCTTGGCCCAAGGGACAAG More
CDS seq		ATGTTACCGTGGGAACGGCAGCCAAAAGCCGCCACCACCAACCTCTCGTCTTCGCCTCCTCTCCCACCCCCTCACGACGAACACTCACACGGTCACACCACTACCCCTGCGAGATCGGTTGCTGGCGCTGCTGGTGGTGGTGGTGGTGGTGGGTGCGTGGCGATGATCACGTTCGCGGACCTGGCGGAGCCGGCGCCCGGCGCCGAGCGGTGCGTCGACCGGCAGCTGTGGCTGGCGTGCGCGGGGGGCATGTGCACCGTGCCGCCGGTGGGCGCCGCCGTGTACTACTTCCCGCAGGGGCACGCCGAGCACGCGCTCGGCCTCGCCGCGCCGGAGCTCTCCGCGGCGCGCGTCCCGGCGCTCGTGCCCTGCCGCGTCGCGTCCGTGCGGTACATGGCCGACCCGGACACCGACGAGGTGTTCGCCAGGATCCGCCTCGTGCCGCTCCGCGCCGCGGAGGATGGGGACGTCGAGGAGGATGGCGCCGCGGCAGGCGAGGAGCACGAGAAGCCGGCGTCGTTCGCCAAGACGCTGACGCAGTCGGATGCCAACAACGGCGGGGGGTTCTCGGTGCCCAGGTACTGCGCCGAGACCATCTTCCCGCGCCTGGACTACGCCGCCGACCCGCCCGTGCAGACCGTCGTCGCCAAGGACGTCCATGGAGTCGCCTGGAACTTCCGCCACATCTACCGGGGCACGCCGCGCCGGCACCTGCTCACCACGGGGTGGAGCACGTTCGTGAACCAGAAGAAGCTCGTGGCCGGCGACTCCATCGTGTTCCTCCGCGGCGACGGAGGGGACCTGCACGTCGGCATCCGGCGCGCCAAGCGCGGGTTTTGCGGCGGCGGAGGCGGAGCCGAGGAGGCCTCCCTGCCCGGGTGGGACCAGTACGGCGGCCTGATGCGAGGCAATGCGAGCCCGTGCGCGGCCGCCAAGGGGCGGGGCAAGGTGCGCGCGGAGGACGTCGTCGAGGCGGCGAGGCTGGCGAGCGGCGGGCAGCCGTTCGAGGTCGTGTACTACCCGCGCGCCAGCACGCCGGAGTTCTGCGTGCGCGCGGCGGCGGTCCGCGCGGCGATGCGGGTGCAGTGGTGCCCCGGGATGCGGTTCAAGATGGCGTTCGAGACCGAGGACTCCTCCCGGATCAGCTGGTTCATGGGCACCGTCGCCAGCGTCCAGGTCGCCGACCCCATCCGTTGGCCGCAGTCGCCGTGGCGGCTTCTCCAGGTGACCTGGGACGAACCGGACCTCCTCCAGAACGTGAAGCGGGTGAGCCCATGGCTGGTCGAGCTGGTGTCGAGCATGCCGGCCATCCACCTCTCGTCCTTCTCGCCGCCGCGCAAGAAGCCCCGGATTCCGGCGTACCCGGAGTTCCCCTTCGAGGGGCAGCTCCTCAACCCGGCGTTCCCGCCAAACCCGCTGGCACACGGCCACCACCATTACCATCACAACCACCCGTCCTTCTTCCCGTTCCCCGACGTTAGTGCTCCTGCAGGCATACAGGGAGCCAGGCATGCGCAATTTGGTCCATCTTTATCAGATCTCCACCTTACCCACCTGCAGTCGAGCCTCATGTACCCGGGGCTCCGCCGCCCCGATCATGTCGGTCCAACATCCATCCCGCCACCAAGAATCAGCACTGACCTGACAATGGGCAGCTCGCCGCCGGCGCGCGCTCTGTCCATGGGCGCCAAGAAGCCCGACGACGCCAAGCCGCCGGGGCTAATGCTGTTCGGGCAGAGGATACTGACCGAGCGCCAGATGAGCCTTAGCGGCACCACCTCGCCGGCGGCCACCGGGAACAGCTCTCTCAACTGGAACACCGAGAAAGGTGCCTCGGAGGGCTCGGGCTCCGGCGTCATCCAGAACAGCCCCACCGACAACACGTCGTCGGAGAGGCTCCAGTGGTTCAGGGAGAACAGCACCGTCTCCGAGCTCGGGCTGGAGCCCGGGCAGTGCAAGGTGTTCATCGAGTCCGACACGGTCGGCCGCAACCTCGACCTCTCGTCGCTGGCCTCGTTCGAGCAGCTCTACGGCCGGCTGTCCGAGATGTTCTGCATCGACAGCGCGGAGCTGAGGAGCCGTGTGCTCTACCGTGGCGCCACCGGCGAAGTGAGGCACGCCGGCGACGAGCCATTCAGCGAGTTCATTAAGTTGGCGAGGAGGCTTACCATACTAACCGACGCCGGGAGCGACAACTTAGGGAGCTAG More
Protein seq		MLPWERQPKAATTNLSSSPPLPPPHDEHSHGHTTTPARSVAGAAGGGGGGGCVAMITFADLAEPAPGAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAARVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGNASPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLSSFSPPRKKPRIPAYPEFPFEGQLLNPAFPPNPLAHGHHHYHHNHPSFFPFPDVSAPAGIQGARHAQFGPSLSDLHLTHLQSSLMYPGLRRPDHVGPTSIPPPRISTDLTMGSSPPARALSMGAKKPDDAKPPGLMLFGQRILTERQMSLSGTTSPAATGNSSLNWNTEKGASEGSGSGVIQNSPTDNTSSERLQWFRENSTVSELGLEPGQCKVFIESDTVGRNLDLSSLASFEQLYGRLSEMFCIDSAELRSRVLYRGATGEVRHAGDEPFSEFIKLARRLTILTDAGSDNLGS
Function		Auxin response factor 8 [UniProtKB/Swiss-Prot:Q6K223]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0436800	OsZS97_02T0436800.1	Chr02	26422335	26425213	+	makerRMon
CDS seq	ATGTTACCGTGGGAACGGCAGCCAAAAGCCGCCACCACCAACCTCTCGTCTTCGCCTCCTCTCCCACCCCCTCACGACGAACACTCACACGGTCACACCACTACCCCTGCGAGATCGGTTGCTGGCGCTGCTGGTGGTGGTGGTGGTGGTGGGTGCGTGGCGATGATCACGTTCGCGGACCTGGCGGAGCCGGCGCCCGGCGCCGAGCGGTGCGTCGACCGGCAGCTGTGGCTGGCGTGCGCGGGGGGCATGTGCACCGTGCCGCCGGTGGGCGCCGCCGTGTACTACTTCCCGCAGGGGCACGCCGAGCACGCGCTCGGCCTCGCCGCGCCGGAGCTCTCCGCGGCGCGCGTCCCGGCGCTCGTGCCCTGCCGCGTCGCGTCCGTGCGGTACATGGCCGACCCGGACACCGACGAGGTGTTCGCCAGGATCCGCCTCGTGCCGCTCCGCGCCGCGGAGGATGGGGACGTCGAGGAGGATGGCGCCGCGGCAGGCGAGGAGCACGAGAAGCCGGCGTCGTTCGCCAAGACGCTGACGCAGTCGGATGCCAACAACGGCGGGGGGTTCTCGGTGCCCAGGTACTGCGCCGAGACCATCTTCCCGCGCCTGGACTACGCCGCCGACCCGCCCGTGCAGACCGTCGTCGCCAAGGACGTCCATGGAGTCGCCTGGAACTTCCGCCACATCTACCGGGGCACGCCGCGCCGGCACCTGCTCACCACGGGGTGGAGCACGTTCGTGAACCAGAAGAAGCTCGTGGCCGGCGACTCCATCGTGTTCCTCCGCGGCGACGGAGGGGACCTGCACGTCGGCATCCGGCGCGCCAAGCGCGGGTTTTGCGGCGGCGGAGGCGGAGCCGAGGAGGCCTCCCTGCCCGGGTGGGACCAGTACGGCGGCCTGATGCGAGGCAATGCGAGCCCGTGCGCGGCCGCCAAGGGGCGGGGCAAGGTGCGCGCGGAGGACGTCGTCGAGGCGGCGAGGCTGGCGAGCGGCGGGCAGCCGTTCGAGGTCGTGTACTACCCGCGCGCCAGCACGCCGGAGTTCTGCGTGCGCGCGGCGGCGGTCCGCGCGGCGATGCGGGTGCAGTGGTGCCCCGGGATGCGGTTCAAGATGGCGTTCGAGACCGAGGACTCCTCCCGGATCAGCTGGTTCATGGGCACCGTCGCCAGCGTCCAGGTCGCCGACCCCATCCGTTGGCCGCAGTCGCCGTGGCGGCTTCTCCAGGTGACCTGGGACGAACCGGACCTCCTCCAGAACGTGAAGCGGGTGAGCCCATGGCTGGTCGAGCTGGTGTCGAGCATGCCGGCCATCCACCTCTCGTCCTTCTCGCCGCCGCGCAAGAAGCCCCGGATTCCGGCGTACCCGGAGTTCCCCTTCGAGGGGCAGCTCCTCAACCCGGCGTTCCCGCCAAACCCGCTGGCACACGGCCACCACCATTACCATCACAACCACCCGTCCTTCTTCCCGTTCCCCGACGTTAGTGCTCCTGCAGGCATACAGGGAGCCAGGCATGCGCAATTTGGTCCATCTTTATCAGATCTCCACCTTACCCACCTGCAGTCGAGCCTCATGTACCCGGGGCTCCGCCGCCCCGATCATGTCGGTCCAACATCCATCCCGCCACCAAGAATCAGCACTGACCTGACAATGGGCAGCTCGCCGCCGGCGCGCGCTCTGTCCATGGGCGCCAAGAAGCCCGACGACGCCAAGCCGCCGGGGCTAATGCTGTTCGGGCAGAGGATACTGACCGAGCGCCAGATGAGCCTTAGCGGCACCACCTCGCCGGCGGCCACCGGGAACAGCTCTCTCAACTGGAACACCGAGAAAGGTGCCTCGGAGGGCTCGGGCTCCGGCGTCATCCAGAACAGCCCCACCGACAACACGTCGTCGGAGAGGCTCCAGTGGTTCAGGGAGAACAGCACCGTCTCCGAGCTCGGGCTGGAGCCCGGGCAGTGCAAGGTGTTCATCGAGTCCGACACGGTCGGCCGCAACCTCGACCTCTCGTCGCTGGCCTCGTTCGAGCAGCTCTACGGCCGGCTGTCCGAGATGTTCTGCATCGACAGCGCGGAGCTGAGGAGCCGTGTGCTCTACCGTGGCGCCACCGGCGAAGTGAGGCACGCCGGCGACGAGCCATTCAGCGAGTTCATTAAGTTGGCGAGGAGGCTTACCATACTAACCGACGCCGGGAGCGACAACTTAGGGAGCTAG More
Protein seq	MLPWERQPKAATTNLSSSPPLPPPHDEHSHGHTTTPARSVAGAAGGGGGGGCVAMITFADLAEPAPGAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAARVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGNASPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLSSFSPPRKKPRIPAYPEFPFEGQLLNPAFPPNPLAHGHHHYHHNHPSFFPFPDVSAPAGIQGARHAQFGPSLSDLHLTHLQSSLMYPGLRRPDHVGPTSIPPPRISTDLTMGSSPPARALSMGAKKPDDAKPPGLMLFGQRILTERQMSLSGTTSPAATGNSSLNWNTEKGASEGSGSGVIQNSPTDNTSSERLQWFRENSTVSELGLEPGQCKVFIESDTVGRNLDLSSLASFEQLYGRLSEMFCIDSAELRSRVLYRGATGEVRHAGDEPFSEFIKLARRLTILTDAGSDNLGS More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0436800	OsZS97_02T0436800.2	Chr02	26422335	26425255	+	makerRMon
CDS seq	ATGTTACCGTGGGAACGGCAGCCAAAAGCCGCCACCACCAACCTCTCGTCTTCGCCTCCTCTCCCACCCCCTCACGACGAACACTCACACGGTCACACCACTACCCCTGCGAGATCGGTTGCTGGCGCTGCTGGTGGTGGTGGTGGTGGTGGGTGCGTGGCGATGATCACGTTCGCGGACCTGGCGGAGCCGGCGCCCGGCGCCGAGCGGTGCGTCGACCGGCAGCTGTGGCTGGCGTGCGCGGGGGGCATGTGCACCGTGCCGCCGGTGGGCGCCGCCGTGTACTACTTCCCGCAGGGGCACGCCGAGCACGCGCTCGGCCTCGCCGCGCCGGAGCTCTCCGCGGCGCGCGTCCCGGCGCTCGTGCCCTGCCGCGTCGCGTCCGTGCGGTACATGGCCGACCCGGACACCGACGAGGTGTTCGCCAGGATCCGCCTCGTGCCGCTCCGCGCCGCGGAGGATGGGGACGTCGAGGAGGATGGCGCCGCGGCAGGCGAGGAGCACGAGAAGCCGGCGTCGTTCGCCAAGACGCTGACGCAGTCGGATGCCAACAACGGCGGGGGGTTCTCGGTGCCCAGGTACTGCGCCGAGACCATCTTCCCGCGCCTGGACTACGCCGCCGACCCGCCCGTGCAGACCGTCGTCGCCAAGGACGTCCATGGAGTCGCCTGGAACTTCCGCCACATCTACCGGGGCACGCCGCGCCGGCACCTGCTCACCACGGGGTGGAGCACGTTCGTGAACCAGAAGAAGCTCGTGGCCGGCGACTCCATCGTGTTCCTCCGCGGCGACGGAGGGGACCTGCACGTCGGCATCCGGCGCGCCAAGCGCGGGTTTTGCGGCGGCGGAGGCGGAGCCGAGGAGGCCTCCCTGCCCGGGTGGGACCAGTACGGCGGCCTGATGCGAGGCAATGCGAGCCCGTGCGCGGCCGCCAAGGGGCGGGGCAAGGTGCGCGCGGAGGACGTCGTCGAGGCGGCGAGGCTGGCGAGCGGCGGGCAGCCGTTCGAGGTCGTGTACTACCCGCGCGCCAGCACGCCGGAGTTCTGCGTGCGCGCGGCGGCGGTCCGCGCGGCGATGCGGGTGCAGTGGTGCCCCGGGATGCGGTTCAAGATGGCGTTCGAGACCGAGGACTCCTCCCGGATCAGCTGGTTCATGGGCACCGTCGCCAGCGTCCAGGTCGCCGACCCCATCCGTTGGCCGCAGTCGCCGTGGCGGCTTCTCCAGGTGACCTGGGACGAACCGGACCTCCTCCAGAACGTGAAGCGGGTGAGCCCATGGCTGGTCGAGCTGGTGTCGAGCATGCCGGCCATCCACCTCTCGTCCTTCTCGCCGCCGCGCAAGAAGCCCCGGATTCCGGCGTACCCGGAGTTCCCCTTCGAGGGGCAGCTCCTCAACCCGGCGTTCCCGCCAAACCCGCTGGCACACGGCCACCACCATTACCATCACAACCACCCGTCCTTCTTCCCGTTCCCCGACGTTAGTGCTCCTGCAGGCATACAGGGAGCCAGGCATGCGCAATTTGGTCCATCTTTATCAGATCTCCACCTTACCCACCTGCAGTCGAGCCTCATGTACCCGGGGCTCCGCCGCCCCGATCATGTCGGTCCAACATCCATCCCGCCACCAAGAATCAGCACTGACCTGACAATGGGCAGCTCGCCGCCGGCGCGCGCTCTGTCCATGGGCGCCAAGAAGCCCGACGACGCCAAGCCGCCGGGGCTAATGCTGTTCGGGCAGAGGATACTGACCGAGCGCCAGATGAGCCTTAGCGGCACCACCTCGCCGGCGGCCACCGGGAACAGCTCTCTCAACTGGAACACCGAGAAAGGTGCCTCGGAGGGCTCGGGCTCCGGCGTCATCCAGAACAGCCCCACCGACAACACGTCGTCGGAGAGGCTCCAGTGGTTCAGGGAGAACAGCACCGTCTCCGAGCTCGGGCTGGAGCCCGGGCAGTGCAAGGTGTTCATCGAGTCCGACACGGTCGGCCGCAACCTCGACCTCTCGTCGCTGGCCTCGTTCGAGCAGCTCTACGGCCGGCTGTCCGAGATGTTCTGCATCGACAGCGCGGAGCTGAGGAGCCGTGTGCTCTACCGTGGCGCCACCGGCGAAGTGAGGCACGCCGGCGACGAGCCATTCAGGTGA More
Protein seq	MLPWERQPKAATTNLSSSPPLPPPHDEHSHGHTTTPARSVAGAAGGGGGGGCVAMITFADLAEPAPGAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAARVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGNASPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLSSFSPPRKKPRIPAYPEFPFEGQLLNPAFPPNPLAHGHHHYHHNHPSFFPFPDVSAPAGIQGARHAQFGPSLSDLHLTHLQSSLMYPGLRRPDHVGPTSIPPPRISTDLTMGSSPPARALSMGAKKPDDAKPPGLMLFGQRILTERQMSLSGTTSPAATGNSSLNWNTEKGASEGSGSGVIQNSPTDNTSSERLQWFRENSTVSELGLEPGQCKVFIESDTVGRNLDLSSLASFEQLYGRLSEMFCIDSAELRSRVLYRGATGEVRHAGDEPFR More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	6.3481835	8.433467	22.739783

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_02g0628600	RBH	0.444253	0.533825	1.144864
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os02g41800	RBH	0.300888	0.342426	0.304446
Nipponbare \| IRGSP 1.0 \| RAP-db	Os02g0628600	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_02g0025880	RBH	0.144194	9.290747	3.519259
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_02g0026020	RBH	0.000000	3.685713	1.590641
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_02g0025830	RBH	0.277724	6.135345	1.020181
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_02g0025440	RBH	0.0	0.416311	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_02g0025550	RBH	0.403406	6.614303	2.172952
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_02G0408100	RBH	4.725002	13.9637	3.2096425
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_02g0025440	RBH	0.037067	0.587650	0.189647
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0407700	RBH	1.7703225	2.6233725	2.3651425
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_02g0025640	RBH	0.050846	0.259197	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_02g0025420	RBH	0.0	5.848580	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_02g0025760	RBH	0.0	24.109240	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_02g0025660	RBH	0.070976	1.085273	0.616401
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_02g0025220	RBH	0.045533	3.775048	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_02G025830	RBH	0.0	3.081031	2.014462
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_02g0025680	RBH	0.0	5.655729	2.543994

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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