Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_02G0376100 OGI:02061040 | 16/16 Zhenshan 97 | ZS97RS3 | HZAU Chr02:22635698-22637013
Gene Symbol EL5, EL5.1, EL5.2, EL5.3, EL5.4, EL5.5, EL5.6, EL5.6, EL5.3, -
DNA seq

GTAATTTTTCCTGCTCTATCAATATAACTTTGCACCGTTCCATGTGAGTCGTTAAAAAAAAAAGAAATTCATATTCGGCTCACAATTCATGGAACATACGGAGAGGGATGCTTCTCACTTGTCACTGCCATCCATACATTTCTCTTTGCTACTTGACTGATGAACAAATAATTTCTACTTAAATGTTTCTAATCTTAAAAATGAAATTGATATTTTCTAAAATCGTAGGAATTAATGGCGATTCCAGTTCGGTTCTACCGATATGTACAGGGAGATCGCCTTATAATACTTGACGACCTCGCCGCCGTCAATTCCGGACATGCGCGGCGGCGGTTCTTGCACCGGCCTCGGCCTCCGGTGGCCGTGCCGGCGTTGCCGCCTCCACGGCGCGGATGGCGACGGTGACGCTGACACCGTGCTCGACGTCGCCGTCGTCGTTGTCTCCTCCGGTGGCGCAGGAGCATGACGACGTCGACCCCGCCGCCCCTTGCCGCCCGAAGCTCCAGAGCCTTCTCAGTGACCTCAGCCGCGCCAAGCTCGGCGACGACCTCGCCGCCGCGTCGCGCGGGGTCATCGAAGCCGCGGATTCGGGGATCTCGATCACCAGCGTGCTGCGGCCCTCCGCTGTCATGGTCACCGCGCCGGCGCCATGGTCGGACAGGCCGAGCAGGACGCTCGCCGGGAGGCTCACGGTGTAGCTCGCCGGCGGCTCCGGTGGGACGGGAGGAAGAGGCGGCGGCGGCGGCGGTGGCACGACGACGGTGAGGCGGCAGAGCGGGCAGGTGGAGTGGGAGCCGAGCCACATGTCGACGCACTCGGCGTGGAAGCCGTGGCCGCACCGGGGGAGGAACCTGGCCTCCTCGCCGTCCTCGAGCTCCGCGAGGCACACCGCGCACTCGACGCCGTCGTCGTCCTCCTCCTCCTCCTTCGCCGCCGCCGCCGCCGTGCTGCGGCTGTACACCGTAACCGGCAGCGACCGGAGCACCTCCGGGTCGACCCCTCCTCCCGTTCCACCGTCCCCGCCGCTCCCAGAGCGCGGCCGCGGCCGCCGCCCGCGCCCGCTCGTCGACGTCGTCGTCACGGCGCGGCGCCGCTCGTCGCAGTAGCACTGGAGCAGGACGAAGGCGAGCGTGAGCGCCGCGAAGACGATGAGCACGGCCGCCACGGTGGCGATGCCGCCGGCCGTCATGGCTGCCTGCCCTGCAGGCGCGGACACCGGCGACGGCGACGACGACGACGAAGACTCGTCCATGGCGGGGCCGCCCTGCTCGACACCCCGCACCATAATAATCGACCCGTCACATGCATATGTGACC

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CDS seq

ATGGTGCGGGGTGTCGAGCAGGGCGGCCCCGCCATGGACGAGTCTTCGTCGTCGTCGTCGCCGTCGCCGGTGTCCGCGCCTGCAGGGCAGGCAGCCATGACGGCCGGCGGCATCGCCACCGTGGCGGCCGTGCTCATCGTCTTCGCGGCGCTCACGCTCGCCTTCGTCCTGCTCCAGTGCTACTGCGACGAGCGGCGCCGCGCCGTGACGACGACGTCGACGAGCGGGCGCGGGCGGCGGCCGCGGCCGCGCTCTGGGAGCGGCGGGGACGGTGGAACGGGAGGAGGGGTCGACCCGGAGGTGCTCCGGTCGCTGCCGGTTACGGTGTACAGCCGCAGCACGGCGGCGGCGGCGGCGAAGGAGGAGGAGGAGGACGACGACGGCGTCGAGTGCGCGGTGTGCCTCGCGGAGCTCGAGGACGGCGAGGAGGCCAGGTTCCTCCCCCGGTGCGGCCACGGCTTCCACGCCGAGTGCGTCGACATGTGGCTCGGCTCCCACTCCACCTGCCCGCTCTGCCGCCTCACCGTCGTCGTGCCACCGCCGCCGCCGCCGCCTCTTCCTCCCGTCCCACCGGAGCCGCCGGCGAGCTACACCGTGAGCCTCCCGGCGAGCGTCCTGCTCGGCCTGTCCGACCATGGCGCCGGCGCGGTGACCATGACAGCGGAGGGCCGCAGCACGCTGGTGATCGAGATCCCCGAATCCGCGGCTTCGATGACCCCGCGCGACGCGGCGGCGAGGTCGTCGCCGAGCTTGGCGCGGCTGAGGTCACTGAGAAGGCTCTGGAGCTTCGGGCGGCAAGGGGCGGCGGGGTCGACGTCGTCATGCTCCTGCGCCACCGGAGGAGACAACGACGACGGCGACGTCGAGCACGGTGTCAGCGTCACCGTCGCCATCCGCGCCGTGGAGGCGGCAACGCCGGCACGGCCACCGGAGGCCGAGGCCGGTGCAAGAACCGCCGCCGCGCATGTCCGGAATTGA

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Protein seq

MVRGVEQGGPAMDESSSSSSPSPVSAPAGQAAMTAGGIATVAAVLIVFAALTLAFVLLQCYCDERRRAVTTTSTSGRGRRPRPRSGSGGDGGTGGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVVVPPPPPPPLPPVPPEPPASYTVSLPASVLLGLSDHGAGAVTMTAEGRSTLVIEIPESAASMTPRDAAARSSPSLARLRSLRRLWSFGRQGAAGSTSSCSCATGGDNDDGDVEHGVSVTVAIRAVEAATPARPPEAEAGARTAAAHVRN

Function E3 ubiquitin-protein ligase EL5 [UniProtKB/Swiss-Prot:Q9LRB7]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_02G0376100 OsZS97_02T0376100.1 Chr02 22635698 22637013 - makerRMon
CDS seq

ATGGTGCGGGGTGTCGAGCAGGGCGGCCCCGCCATGGACGAGTCTTCGTCGTCGTCGTCGCCGTCGCCGGTGTCCGCGCCTGCAGGGCAGGCAGCCATGACGGCCGGCGGCATCGCCACCGTGGCGGCCGTGCTCATCGTCTTCGCGGCGCTCACGCTCGCCTTCGTCCTGCTCCAGTGCTACTGCGACGAGCGGCGCCGCGCCGTGACGACGACGTCGACGAGCGGGCGCGGGCGGCGGCCGCGGCCGCGCTCTGGGAGCGGCGGGGACGGTGGAACGGGAGGAGGGGTCGACCCGGAGGTGCTCCGGTCGCTGCCGGTTACGGTGTACAGCCGCAGCACGGCGGCGGCGGCGGCGAAGGAGGAGGAGGAGGACGACGACGGCGTCGAGTGCGCGGTGTGCCTCGCGGAGCTCGAGGACGGCGAGGAGGCCAGGTTCCTCCCCCGGTGCGGCCACGGCTTCCACGCCGAGTGCGTCGACATGTGGCTCGGCTCCCACTCCACCTGCCCGCTCTGCCGCCTCACCGTCGTCGTGCCACCGCCGCCGCCGCCGCCTCTTCCTCCCGTCCCACCGGAGCCGCCGGCGAGCTACACCGTGAGCCTCCCGGCGAGCGTCCTGCTCGGCCTGTCCGACCATGGCGCCGGCGCGGTGACCATGACAGCGGAGGGCCGCAGCACGCTGGTGATCGAGATCCCCGAATCCGCGGCTTCGATGACCCCGCGCGACGCGGCGGCGAGGTCGTCGCCGAGCTTGGCGCGGCTGAGGTCACTGAGAAGGCTCTGGAGCTTCGGGCGGCAAGGGGCGGCGGGGTCGACGTCGTCATGCTCCTGCGCCACCGGAGGAGACAACGACGACGGCGACGTCGAGCACGGTGTCAGCGTCACCGTCGCCATCCGCGCCGTGGAGGCGGCAACGCCGGCACGGCCACCGGAGGCCGAGGCCGGTGCAAGAACCGCCGCCGCGCATGTCCGGAATTGA

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Protein seq

MVRGVEQGGPAMDESSSSSSPSPVSAPAGQAAMTAGGIATVAAVLIVFAALTLAFVLLQCYCDERRRAVTTTSTSGRGRRPRPRSGSGGDGGTGGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVVVPPPPPPPLPPVPPEPPASYTVSLPASVLLGLSDHGAGAVTMTAEGRSTLVIEIPESAASMTPRDAAARSSPSLARLRSLRRLWSFGRQGAAGSTSSCSCATGGDNDDGDVEHGVSVTVAIRAVEAATPARPPEAEAGARTAAAHVRN

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 1.3070655 16.2969255 0.713429

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0561000 RBH 0.019105 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g35329 RBH 0.420086 0.491889 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os02g0561800 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0021390 RBH 0.0 0.0 0.201336
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0021490 RBH 0.0 0.0 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0021490 RBH 0.033371 0.0 0.297297
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0021210 RBH 0.0 0.038049 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0021140 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0349400 RBH 1.145612 17.902112 0.2673035
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0020870 RBH 0.0 0.0 0.050181
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0341400 RBH 0.1377785 0.0260265 0.794781
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0021330 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0021070 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0021530 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0021220 RBH 0.148052 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0021060 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G021490 RBH 0.123940 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0021270 RBH 0.0 0.0 0.620485
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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