Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_02G0354200 | OGI:02058010 | 8/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr02:21290312-21291333 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCGCCGAACGAAGCAGACGGCGCGCAAGTCTCCACCGGCGGCAAGGCGCCGAGGAAGCAAGCTGGTGCGGGAGACACCAACCAACCTCTGCGTCATCCACGGCTCCACGCCAAGCGTCGTCACCATCAATGCCCCCAAGGACATCCAGCTCGCGCGCCGCATCAGAGGTCAGAGGGGCCTAGCCCTTTGCCTTGCCTTGCCTGGCCTGGAGGCTTCTTCTGTTTTCTTGGCAAAGTGGCACCTTTTTTTCAGATTTCAGTCGGTAGGTTAGGAGATGTGTTCGTCGGGTTAGATGGGTAACCTGGCCTTTAATTATGTTGTTATCTTGTGATGCTGTAATCATTGTGGTTTGCTAATCTTAATGGAAATGCTATGCCGTTTGGTATTTCTGAACTGAATGAATGCTTCAAAGTGGAATGTCATTCTGTTTTGTGCTAATATGTTGGACCGTATCTATGCAGAAACTTGTTTCATGAATTCGTTTTACTTGCATTTCATCAAATTGCTAACATTTAGGCAAGTCAGCAGGAGAAACTAATTTGACAAAATAGACACATCTCCTAGCATTTATACAATCAAAGCACAAGTGTGACAAGCTTGTACAAATGGGCTTATGCTATTGACATATCCCCATCATAATGGCATATTTCTAAACCTGCAACTATAAGAGTGGCATGAATCTAATCCTTCCAAATCCATAAGACTGATCCAAAGATATCATCTCTAATTCTCTACCCTGTTCTACAGACTAGTCCTACATTGTTCATGTGATCATGTTCACATACAGGCTACAAAATAGTCTACAGTTCTGCACCATCCACCATCTGACGATTGCAAGAGAGCTAACAATTCGTTGGCATTATACTGACAATGGATCATGGATGTGCTCTCAATGTCCTTGGTATGTCACAATTGATGAGCGATATGCGGGAGAATTTAACCTTCAAATTGCTAATCAACACAACACCAAGTGGCTGTCACTCTGGAACTTGGTGACCGCTATCACTGCTAATCGTTAG
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| CDS seq | ATGGCGCCGAACGAAGCAGACGGCGCGCAAGTCTCCACCGGCGGCAAGGCGCCGAGGAAGCAAGCTGGTGCGGGAGACACCAACCAACCTCTGCGTCATCCACGGCTCCACGCCAAGCGTCGTCACCATCAATGCCCCCAAGGACATCCAGCTCGCGCGCCGCATCAGAGGCTACAAAATAGTCTACAGTTCTGCACCATCCACCATCTGACGATTGCAAGAGAGCTAACAATTCGTTGGCATTATACTGACAATGGATCATGGATGTGCTCTCAATGTCCTTGGTATGTCACAATTGATGAGCGATATGCGGGAGAATTTAACCTTCAAATTGCTAATCAACACAACACCAAGTGGCTGTCACTCTGGAACTTGGTGACCGCTATCACTGCTAATCGTTAG
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| Protein seq | MAPNEADGAQVSTGGKAPRKQAGAGDTNQPLRHPRLHAKRRHHQCPQGHPARAPHQRLQNSLQFCTIHHLTIARELTIRWHYTDNGSWMCSQCPWYVTIDERYAGEFNLQIANQHNTKWLSLWNLVTAITANR |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_02G0354200 | OsZS97_02T0354200.1 | Chr02 | 21290312 | 21291333 | + | makerRMon | ||
| CDS seq | ATGGCGCCGAACGAAGCAGACGGCGCGCAAGTCTCCACCGGCGGCAAGGCGCCGAGGAAGCAAGCTGGTGCGGGAGACACCAACCAACCTCTGCGTCATCCACGGCTCCACGCCAAGCGTCGTCACCATCAATGCCCCCAAGGACATCCAGCTCGCGCGCCGCATCAGAGGCTACAAAATAGTCTACAGTTCTGCACCATCCACCATCTGACGATTGCAAGAGAGCTAACAATTCGTTGGCATTATACTGACAATGGATCATGGATGTGCTCTCAATGTCCTTGGTATGTCACAATTGATGAGCGATATGCGGGAGAATTTAACCTTCAAATTGCTAATCAACACAACACCAAGTGGCTGTCACTCTGGAACTTGGTGACCGCTATCACTGCTAATCGTTAG
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| Protein seq | MAPNEADGAQVSTGGKAPRKQAGAGDTNQPLRHPRLHAKRRHHQCPQGHPARAPHQRLQNSLQFCTIHHLTIARELTIRWHYTDNGSWMCSQCPWYVTIDERYAGEFNLQIANQHNTKWLSLWNLVTAITANR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.0286975 | 0.0629735 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0020370 | RBH | 0.000000 | 0.000000 | 1.129540 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0020480 | RBH | 0.000000 | 1.597313 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0020450 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0020210 | RBH | 0.030092 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G020500 | RBH | 0.000000 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
