Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_02G0307800 OGI:02050130 | 16/16 Zhenshan 97 | ZS97RS3 | HZAU Chr02:18304345-18312294
Gene Symbol -
DNA seq

CTATGTGGTACGGTAGCCATGTGACGTCTCATATATCTTGGTAAAAAAACAAAAGGTACAAACTGTTCATTTACAATTAATCTCAGTGTCCATAATTAGTATATGGATGTCAGGGGAATATATGACTTGGACAAGATCAGCACCAACTTAAATGGGGGAGAGAAGAACCTGTGATTAGCAAGCTGACGATGAGGGTAGAGCCAGCAGCAGATCAGATCAAGAGCACAAAGCACATGATCATGAGTACTGGATCGTCATTAGCACGAAGTAGGCAGGCACTATACTCGAGTCATTACCAGTAGCAAGGTAATTTCCACACTCCCAGATCCCAAGCAGTAGATACACGCACATATATGTACAGATAATTTACTTGTTTGTCATCACTTGTCACACCCTGCCACCACCAATACCCCAAAAATGTCAACATGAATAAAATGGGTTAGAAATGGGCAATGAAATGGTGAAGGAAACAAATCTTCGGAGCATGTAAAATACACTAGCAGCACTATTATGAGAAGCAGGGTAGGTAATAATAAACCTAAGAATGGTACTTTACTTTAGTAGTTGAACTTGAAACTACTTATAGCGGTAGAAAGTTAAAATGGTACTACCTCCGTTTCAGGTTAAAGGCGTTTTGACTTTAGTTAAAGTCAAACTACTTCAAGTTTAACTAAGTTTATAGAAAAAAAATATTTTCAACTCAAGACAAATTTTATTATGAAAATATATACAATTATTGATTTAACGAAACTATTCATATTATAAATATTATTATATTTGTCTATAAACTTAGTCAAACTAATAGTTTGACTTTGACCAAAATTATAATATCTTGTAGCTGAAACAGAGGGAGTAGTCTGGAGGATTTATGCACAAGAGGAAAAATTTATACTGCACAGAGGTTCAGCATAACATATCCCGACACCCGACTGTATGCTCCCAATAAACCTTGACAGAGTACGCTAAAATGAACCTTGATGAGGTCTAGGAGCTGTGGGTTGGTAACCAAATTAATTTTCTTCCTAAAACATATCACTAGCACATATCATTAGATAATCATAATGTGGAGTAAATGGCATAGCAATTAGGGACTCATGGACTGCCAGAGTTGTGCATGCTGCTCTTCTTGTGAACTGTGAACAGCTATCACAACATGGCATGCTGCAAGCGTTTGAATTCCAGGGCATCTGATCAGGCAGCAATATACTTCAGGGCTCCAACAAGTTGTATATATTTATATTGGTAGATATGGAGACCGAAGATAAACAGTATTTACATCAGGATCATAATCACAGTGGAGGGAGATTTACGGATTTTGATGATTCATCAGGGCGTACTAACAATAAAACTTACATAGACCGCTATCTTTTCTCTAAGGCATCGGAAACATATGCAGGTATCCTAGGAACCAGTAAACTGTAAAAGGTAGCAACTCGCTTCTTTAACTTTAGACAAGTATACTCCTTAAAAAGCTCCCCATCTATTTTTTTTCGATAATGTTAATCCAGAGGTTCCATATCAACGCTGCCTGACATCTTCAAGGATTGCAAAGCCTCCCTGCACATTTCCAGTTACTGAGATGAGTATGTTTTATAAAGGGCCATTTCAGTGTAGCTGAAGGGACTAAGGTTACCTTAGGCTGTGTTTAGATCCAAAGTTTGGATCCAAACTTCAGTCCTTTTCCATCACATCAACCTATCATACACACACAACTTTTCAGTCACATCATCTCTAATTTCAACCAAAATCCAAACTTTGCGCTGAACTAAACACAGCCTTAATGCATTATTCATCTTAACATTCTCTGGCTCCAACTTGAGACCATCAAGAAATGAGCTGCATGCATTTTTGTAATCCTGAATGCATAAAGATTAGAACATACGAAACGATCTGTTACAAAATCTTCAAAAGATGATCAGAGCATTTATGTCCCACCTTCAGTGACATTAGAGCAGCTCCTTGACGGTAGCAGGCTTCTGGCCAGTTTGGTTGCATCATCCTGCAAGCTTCAGCATCTATCAAAGCCTTCTCCCCCTCACCCAATTTCAGCCAACAAAGGCTCCTATTTGAGAACAAAGATGCATCTCTAGTTGCATGCCAGACAAGCAATTAGCACAAACAGTTAAGGTTGCATGCCCTACCACAGTTGACCAGTGACATCTCAATACATTATTTATACCCGGTTGAAGATTCAATTTCACATTCAATCTACTGTCTGTATTTTTAGTTTAAAGATATAAAATAATGTGTGATATTTCAAATATCAAAGGAAAAATTATATCGGAAATAGATGCATCTTAATATGAAGCTGTAATAATGTACCTTGGTATAAATGTGCATGGCACCACGATAATCTTTATTCTTGACTGCTTCACGGCCTTGAAATTTTCCCATATCAAGCATAGCTTCGCAAAACTCTTCATCCTGAAACATTGAGAAAAATCAAATGAAATATAAGGCTCATTACCACACATTATAGCCCACATGCTCAGTACTCAGTTGCATCAATTATTATATTTTTATCTTTGAGCCAATGAAAGATGTAAATATATTTTTATATAGTTTCATGAAGCAGTTGCCAAATCAACGCAGGGAATCATGTGATTGTTACACCTCACTATTTTTACCGTCATACTACTGCTAATTTACAGTTCTACAGTACTGATGTTGCCATATTATGTTCTCTACAGCATGCCAAGAAGCACCCACTAGTATATAGTAGCAGTGAGTCATGTAGACCTTGGAACTTTCAAGATATTTCTTATGAACGTATTTAGAAAAAGCATACTCAAGCAAATTTAAGACAAACCAGTGAACTCCTATATTTTTTGCTTTTTCCATTATAAATGTGTGCAATATTAATTGTCATAAGAAATTGCATTTTTACTTTCAACAGTTCCAAATGTCTGTAAGACAACAAGTGATCCCCCTCTAATAATTCTTACTAGTGGCACCCACTAGCAATATTTTAAGTCACTAAAGCTTTAGAATAATGTACCTAAAAGACCGAAAAGCGAGATGTTTTAAGATCCCATGTCCAATGGCCAATTGGCATTTGCTAGATCACAAACCACATAGGATGGGAAATTGAACATGAAATATGTAGATAATCCCCAAGTTCAATGAGGATGGGAAATTGAACATGAAAAATGTAGATACCCCCCAAGTTCAATGAGATAAATGTTAGACATGTATGCTCTCTAGAACAGTCTCTTATCGTAAATTGCTACATCCATCAATTCAAAACAACTTGATGATGCAAGGAGGTCACAACATCCAACTACCATACTGCTAAATGCTTGCATATAATATGCCATGAAAAATTATGCCGTATGCATTACTGACAACTGAGTTGCAGGTTTTATATAAATTGCGTAGTGTACAATACCATAGACGAATGTCAAGAACTACCTCAGTTCTTTTTTTGTTTGTTGTTTTGGGCATCTATAATCTAAAAAAAGTCATTTCCTTTCTTTTCTTTTTCTTCGAATTCAAGTTCTTTCTTTGATCTCATATTAGGATATAAGTTGATTTCTAGAGTTTAAAACTTGTCCCAAAATAAATTGATTTCTAGCCTCTTGCCTACCCTCGGTCCACAAATTGAGAAATTTTATACCTTCAATACCCCTTACTTACCCATCCACCAATACTACCTTCCTATTAAGGTGGGAAACTTTAGTCTTTTCCCCTCACCACTAAAGTTTTCTCAGGACACGAGGGTTTCATTTATTTTGGGAGAGGGACTATACTAGATATACTCAGATGTAGAAGTTGATTTAAAAGTTCAAAAGTACAGAATATTGAAATCGATTTGACAAGTTGGTCAGTGAGCTTGATCCAAGCAAGAAAGAACAGCACACAGAGAACACAATAAACTGGTTTACAGGGAGTTTAGCCCTTACAGAAAGATGACTATCATGCTAAGTATTCACCTAATAACAATCAAAATAATTTCTTAGCCACTTAAGATGTTTTTCAGGAAGAAGGTTTGAATGCTTAAAGGTCAGGGGCGTGAATATAGACTCCACTCTACAGGCATCCCTTGACGGCAGCGACGAAACCAACTTCGTCAGGACAGCTCCCACTAGGAAGATCTTCAGCTCTGGTGTGGAGGAAAAGAGAGCAAGACTGAGTACTACCCACTGTACTCAGCAAGTAATACCGAAAGAGGAGGTATGATGCAGGATATATCCAAAGGAGGCTAAGGGTTCATTTGCATAAAGCAGGCGTTTAAAAACAGTAGTTGAAAACAGTAAAACAATTGTAGTAATTAAGTAGTATTAACCAATCACTGTCCAACGCTACACCATGTTGCAACAGGCCCAACCAACCACCTGAACTACACCAGTTCATTAAGCTAGACTAGGGGTGAGACTAATTACGGTGAATCTGGTTGATCGCCCATAACCGCAGGTACGGCTATTCGAATAGTTTTACTCTGGCCAGAGGTGTACAACTGTCCCCACAAGACACGATTCCACACATGTTGCCATGCCCCGAAGTATCACCATGATACTGCAAAGGGGGAAATCGTGACAAAACCCTCCGCATAACCTTCCCCTAACCATCCACACCATGCTAAGGTTTCACCCCACCCCTCAAAAGGCAGTGGGCGGTCCCTTCTTGCGCTGCGGTGAATCCGGCAGCTAGACAACCGGACACCCCGGCCGACCCAACTCCATCACGCCCACCCTCGCCACCGGTGCCTAGGAAAGGGTCGAGCTATACTTCAGATCAAGCAGTTACCCACTCCCGCTTGTGGTAAGCACGGTAAGTCTCCCAGGGTTTCCCGTGAACCGGTCCTTAATTGCTATGGGTGCGACCAGCAAAACCATGCACCAACAGCCCACCATTCAGTGTATTTTAATTAACTAACACTATTGCGGTGGCACCGATCCAAAGCTATGCTAATAGCCAAAGTCTATGTAATAATGTGATCCTCATTTGTGTACTAGTTGAACTAAGCATGGCTAAGCATTTCCTAAACCAACATCTAATCATTTTGATACCCAAGTTATCAATGGCATATGGTAAACAATATGTGGCTGAGTAATAGGACCCATTCCACATGACATTGAAAAAGAATGCAACATTTAATAGAAATGCAGGATATTTGTAAATAGGGTACAATATGATCAAATGTAATGCATGACTTGCCTTGCTCTCGCACTGATAAGACCACAGCAACGTCTTCGAGATACCGCGGATCGACGAAACGGCCGAAAACTACGCGACAAACAAAGCACACAAGCAAAACATGCTATAAGACTACTAAAACAGGGAACAAAATCATTTTTAATGAATTCTTTGCATTTTTATGAATTTACTGATACTTGAATGGATTTAAACGGAGCTCGGATGAATTACTTATGAATTTTAGAAGATAAACTGTGTTTTTACTAATAAAGAAAAAGTCCTTAATTATTTATTTCGCAATAAATCCCCAAGGCTGATGTCAGCAAGGGGAGGGGGCGCCGACATGTGGGCCCCGCACGTCAGCGGCTCAAGAGAGAGGGAGGGGGCGCCGGCATGCGGGCCCCATGGGTCAGCGGCACAAGGCGGCAGGTCCACCGTGGACCGGGACCACGCGGGTGGTCCACCGCCGGTCCACGGGACCGACGGTCCAGATCGGCCGGGAGGCCGATCGGACGGCACGGCGGCGGCTAGGCACGGGTCGGCTTCAAAACCGGCCGGTCGGCTATGGGGAGCGGCGGCGGCGAGCGATCGCCGGCGACGGCAAGCGGCGGCACGGGAGGCGGCGCGGACGGCGCGAAAGGTGGCGGCGCTCATGGGAGGGACGAAAGGAAGAAGGAGAGGGGATCCCTCACCGAGGCGATGACAGCGACCGGCGCGGGAAGAGACGAGCGGCGGCGGCGGTTCGGTGAACGGTGGACAGGGTCGGGCACAACCTGGGAAAGGCGATGACTGGGTTAGGAGAAGGGAAGGATGACCACGGCGACTAGAACGGCCGGCCAGAGTTGGGCGGAAATGGAGAGCTCACCGGCGTGCGAGGGAGGCAGCGCTCTGGCGACGTTTAGCGGCAAGCGAGCGGCGGCCGAGGTAGCTCTCGCGGCGGCGGAGCTAACGGCGGCGGCGGCTTGGCGCGGCGGAGGCCCTAGCGGCGACGGCGCGTGGCCGGAGATGGCGGCGACGGCGGAGGAGCTCAGGTGCACGCGCGAGGGCGGTAGAAGGCGTGGGAGAGAACGGCGAAATGGGGGAAACGAGAGAGGGAGCTCGGGTGAGGGTTTTTATGGGCAAGGGAGGGGCGGACGTGGCCGGGGAGGAGGCCGAAACCGCCAGCGACGTGGGGTGGAGAGAGAGAGAGAGTGGGGTGGGATTCGATTTCGAATCCCGCCCTCTCGAGCGCGCGCGCGAGGCGGGAGCGACGGGGCGTGGGCGGCGTCGTGGGGAGGACGCAGGAACGGCGCGGCGTGGACGCGGGAGGAGCGGAGGAGGTGGAGCGGCAGCGGCGGTTGCCGGCGTGGGCGCACGGCTGGAGGTTGGGGACGACCCGACAGGTGGGGCCCACCTGTCGGCGTCCCGAAGGGAGGAGGGGGCGCGGGCCGGCCCAAGAAGGAAATGGGCGCGCGCAGGCGGCGGGGTGGACTGGGCCGACGGCCCAAGAAGAGGAAAAAGGAGGAAAAAGAAAAAGAAAAGGAAGAAAGGATTTTTCCTGGGATTTAAAATTGCACTTTGGTGATTTTTAATTGGTTAAAATTATTTCCAAGGCTCTAAAAATTCCACTAAAAATCCTGTTAATATATTGTGACATGTGGAACTCAAGAAAAATCCCACAATGCCAATTCCAATTATTAATTGCATTTATTAATTAAGGAATTAGCTCTAGGTTAAATCAAACCAATTTCTTTGGACGATTTATTTAACAAATTTTTAAAGCAAGGAAAAGAGGGAAACTTCCGGGCGTGACAATCTCACATAACAACACAACAACGGTCTACCAGTTGGGGACAACCATTACATGCAACAGGTTATAACTCTGATATTGGATCAACATGACCAATGCCCGAGCCATTCCACATTGTAGTCCTCATACAGTAAGAAAACTACATGAGTAGCACTGCTACACACTTGCACTATTACAAAGGACCCAAACCTGCATAATTCCTTTGTGTCGATCATGTCATTTTTGTATTGTATGATCCAATCCAGTTCATAAATTGGCTGAAATTTTCAATATATGCACGGATTGCCAATACTAACTATTCCCTGAAAATGTAGAACACGAGGTTTTTGAGAAACTATTGCACAGACTGATAAAATAAAATGCGTGTTGTCCTAAATTTATCCCCAGACCATGGCATGTTTGTTTTTCGCGAACACGCAAAAGAACTACACGTCAATATATTAGAAGAAAGTAGAGTTTAGTTACACGACGGCATGTTTGTTACGTCAATCCCTCTTGATTAATCAGTAGAAAACAACTTCAGAAGCGTGCACGCAAGATATAAATAAACATAGATTATACACCTTCGCCAGAAGCAAAATGGAGAACAGTAAGTCCATCGTTGTTGAGCTTTTCAGTATCAGCTCCATGATCAAGAAGATACCGCACCATGTCCGCATTCCCGGAATTGATCGCAAATGTCAAGGCCGTTTCACCTGTCAACCAACGATACCAGAAACCGAGAAAAGCCTGACGCAATTGTTTTGCCACCAATTTGAGCGCACGATCAACCAGAGTAGAGCAATGCAGCTACACTCAGCTATCAACATAAAAACTAGGAATCTCGAAGAGAGAAGCGCACGTCACACACCTCTGTCCTCGACGGCGTCAATATCCACACGAAGCTCCTCGAGCAGGTACCCGCAAAGGGGCAGGCTCCCCCGGCCGGCGGCGAGGTGCAGCGCGCCGACGCCGTTGCTGTCCCTCACGGCCCCCACCTTGTCGCCGAGGCGGCGGCCGTCCCCCTCGTCCAGCGCCCTCGCCAT

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CDS seq

ATGGCGAGGGCGCTGGACGAGGGGGACGGCCGCCGCCTCGGCGACAAGGTGGGGGCCGTGAGGGACAGCAACGGCGTCGGCGCGCTGCACCTCGCCGCCGGCCGGGGGAGCCTGCCCCTTTGCGGGTACCTGCTCGAGGAGCTTCGTGTGGATATTGACGCCGTCGAGGACAGAGGTGAAACGGCCTTGACATTTGCGATCAATTCCGGGAATGCGGACATGGTGCGGTATCTTCTTGATCATGGAGCTGATACTGAAAAGCTCAACAACGATGGACTTACTGTTCTCCATTTTGCTTCTGGCGAAGAGCGCTGCCTCCCTCGCACGCCGGTGAGCTCTCCATTTCCGCCCAACTCTGGCCGGCCGTTGTGCCCGACCCTGTCCACCGATGAAGAGTTTTGCGAAGCTATGCTTGATATGGGAAAATTTCAAGGCCGTGAAGCAGTCAAGAATAAAGATTATCGTGGTGCCATGCACATTTATACCAAGGTACATTATTACAATGCATCTTTGTTCTCAAATAGGAGCCTTTGTTGGCTGAAATTGGGTGAGGGGGAGAAGGCTTTGATAGATGCTGAAGCTTGCAGGATGATGCAACCAAACTGGCCAGAAGCCTGCTACCGTCAAGGAGCTGCTCTAATGTCACTGAAGGATTACAAAAATGCATGCAGCTCATTTCTTGATGGTCTCAAGTTGGAGCCAGAGAATGTTAAGATGAATAATGCATTAAGGAAGAAAATTAATTTGGTTACCAACCCACAGCTCCTAGACCTCATCAAGATATATGAGACGTCACATGGCTACCGTACCACATAG

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Protein seq

MARALDEGDGRRLGDKVGAVRDSNGVGALHLAAGRGSLPLCGYLLEELRVDIDAVEDRGETALTFAINSGNADMVRYLLDHGADTEKLNNDGLTVLHFASGEERCLPRTPVSSPFPPNSGRPLCPTLSTDEEFCEAMLDMGKFQGREAVKNKDYRGAMHIYTKVHYYNASLFSNRSLCWLKLGEGEKALIDAEACRMMQPNWPEACYRQGAALMSLKDYKNACSSFLDGLKLEPENVKMNNALRKKINLVTNPQLLDLIKIYETSHGYRTT

Function Tetratricopeptide repeat protein 28 [UniProtKB/Swiss-Prot:Q96AY4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_02G0307800 OsZS97_02T0307800.1 Chr02 18304345 18312294 - makerRMon
CDS seq

ATGGCGAGGGCGCTGGACGAGGGGGACGGCCGCCGCCTCGGCGACAAGGTGGGGGCCGTGAGGGACAGCAACGGCGTCGGCGCGCTGCACCTCGCCGCCGGCCGGGGGAGCCTGCCCCTTTGCGGGTACCTGCTCGAGGAGCTTCGTGTGGATATTGACGCCGTCGAGGACAGAGGTGAAACGGCCTTGACATTTGCGATCAATTCCGGGAATGCGGACATGGTGCGGTATCTTCTTGATCATGGAGCTGATACTGAAAAGCTCAACAACGATGGACTTACTGTTCTCCATTTTGCTTCTGGCGAAGAGCGCTGCCTCCCTCGCACGCCGGTGAGCTCTCCATTTCCGCCCAACTCTGGCCGGCCGTTGTGCCCGACCCTGTCCACCGATGAAGAGTTTTGCGAAGCTATGCTTGATATGGGAAAATTTCAAGGCCGTGAAGCAGTCAAGAATAAAGATTATCGTGGTGCCATGCACATTTATACCAAGGTACATTATTACAATGCATCTTTGTTCTCAAATAGGAGCCTTTGTTGGCTGAAATTGGGTGAGGGGGAGAAGGCTTTGATAGATGCTGAAGCTTGCAGGATGATGCAACCAAACTGGCCAGAAGCCTGCTACCGTCAAGGAGCTGCTCTAATGTCACTGAAGGATTACAAAAATGCATGCAGCTCATTTCTTGATGGTCTCAAGTTGGAGCCAGAGAATGTTAAGATGAATAATGCATTAAGGAAGAAAATTAATTTGGTTACCAACCCACAGCTCCTAGACCTCATCAAGATATATGAGACGTCACATGGCTACCGTACCACATAG

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Protein seq

MARALDEGDGRRLGDKVGAVRDSNGVGALHLAAGRGSLPLCGYLLEELRVDIDAVEDRGETALTFAINSGNADMVRYLLDHGADTEKLNNDGLTVLHFASGEERCLPRTPVSSPFPPNSGRPLCPTLSTDEEFCEAMLDMGKFQGREAVKNKDYRGAMHIYTKVHYYNASLFSNRSLCWLKLGEGEKALIDAEACRMMQPNWPEACYRQGAALMSLKDYKNACSSFLDGLKLEPENVKMNNALRKKINLVTNPQLLDLIKIYETSHGYRTT

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0 0.0292085 0.352694

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0492600 RBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g29110 SBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os02g0492600 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0017640 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0017770 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0017680 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0017590 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0017500 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0286300 RBH 0 0 0.005726
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0017290 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0307300 SBH 0.001732 0.0149295 9.4468385
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0017780 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0017380 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0017930 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0017710 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0017420 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G017870 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0017600 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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