Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_01G0633100		OGI:01113960 \| 15/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr01:40029766-40034376		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		TGATTACTCAACTTAGCTGAGAAAAAAAAAACAGCTGATAAAAAGAGAATCTTCTTTTACCCTCTTTTGCAAAGTCGATTTTTTCTATAAAGTCAGCAAACGTCGAAGTTAGGCCACCAGCAACAGATAGGCGCATGCAGATTAACAAATTACCAGCTGCAGGTGTTGCTGTTTTTGTAGGAATGACCCGTGTCATTCACAACCACCCGAATGCACACGAGCTCTTGTTTTGTCCTGAAGAAACGACGTCTTCAGAGGAATGATGAGGTTTGTTAGCCTACAGATTTAACGGAAGCTAATCCCTAGTTTAGCAAATCCATTAGCGCGTATCATGGCAATTGGCAAATGGAGCCTGTTGCTGATTTTGATTTGGAATAGTGGTTGGGATTTTGGAGATTTCCGGGCAAGAATCTGGAGGCAGTGAAAGGTTCCGGTGGGCATCGCCGCCTTGGGACCCCGACCAATTCTTGGCTTCTGGATGATTCGAAGAAAATGAGCAAACCTCTCGAACGCCTCGCCGGCATTGAGCTCTGGTGTACGGCGGCGCCGGCGACCTGCCGGCGACGGGTCGCCGGCGTCGTGGAGGAACGCACGAATGAGAAGTTGAAAACGCCTTGGTTTCTTTTGGTTTTTATTACGAGAAGGGCGTAGTAGTAGTTGTTACGTTAAGCGACAAAGTTTGATAAATAATCTCTAATCGCGTAGACGGCACCGGAGCCGGCGATGGCGTCGCCGGGCGGGAAGGGGCTGGTCGCGTGCAACGCGGCCATCTCCCGCTGCTCGCGCGCGGGGCTGCACCGGCGGGCGCTGGCGCTGTTCACCGAGATGCGCGCGCGGGGACTCCGCGCCGACGAGTACACCCTCCCGCCGATCCTCAACTCCGCCGCGCTGCTCCGCGCCCCGCCCGCGGCGGCGCTCCACGCGCTCCTCCTCCGCGCGGGGCTCGCGTCGCACCTCCATGTCGCCAACGCCCTCGTCGACGCCTACGCCAAGCTGTCCCGCCTCGGAGCCGCGCGGGCGGTGTTCGACGAAATGCCGCGCCGGGACGTGGTCACCTGGACCTCCCTCGTCACCGGGCTCGCCCGCGCCGGATCCCACGGCCTGGCCGTTCGCGCCTACCGCGACATGGTCGCCGCTGGGGTCGCCACCGACGAGTTCGCCGTCGCGGCCGTGCTCAGCTCGTGCGCCGGCTCGACCGCGCTCGAGCTGGGCCGGTCGGTGCACGCCGCGGCGGTCCGGTCCGGGCACGAGCCGTTCCTCTCGGTCGGCAACTCGCTCGTGTCCATGTACGCCAAGACCGGCTCGCTCCGCGACGCGCGCACGGTGTTCGACGCGATGCGCTCCCGGTGCGCCATCACGTGGACGGCGCTGATCGTCGGGTACGCGCAGAACGGCCGGGGCAGGGAGTCCCTCGCCGTCTACGCCGACATGGCCCGCTCCGGCTGCAGGCCGGACTACGTCACCTTCGTCGGCCTGCTCTTCGCCTGCAGCCACGCCGGGCTGCTCGACGCCGGCCGCGCCCACTTCCAGTCCATGCAATCCGAGCACGGCATCTCCCCGGGGCCGGACCACTACGCCTGCATGGTCGACCTGCTCGGCCGCGCCGGCCGCCTCGGCGAGGCCGTCGACCTGCTCGACCGGAGCCCGGCGGCCGAGCTGGACGCCACGGTCTGGAAGGCCCTCCTCGCCGCGTGCCGGACTCACCGGAACGCGGCGCTCGCCGAGCGCGCGGCCGGGATGGTGTGGAGGCTGGATCCGACGGACGCCGTGCCGTACGTCATGCTGTCCAACCTCTACTCGCGGGCGCGGCGGTGGGGCGACGTGGCGAGGGTGCGCGCGCTGATGAGGTCGCGGGGCATCAGCAAGGAGCCCGGGTGCAGCTGGGTGGTGGTCGCCGGCGTGACGCACGTGTTCCACGCCGGGGACAGGGATCACCAGCGGGCGGCGGAGATCTACCGGAAGGCGGAGGAGATGGCGGCGAGGATCCGGGCTCGGGGGCACGTGCCGGACACCGAGTGGGCGCTGCAGGACGAGGCGCCGGAGGGGAGGGAGATGGGGCTGGCTCACCACGGCGAGAGGCTCGCCGTCGCGTTCGGCCTCCTCGCCGTGCCAGCCGCCGCGCCCATCCGCGTGTACAAGAACCTCCGGGTGTGCGGCGACTGCCACGCCGCGATCAAGATGGTCGCCGAGGTGTACGGCAGGGAGATCATACTGAGAGACTCCAACTGCTTCCATCACATGAAGGATGGTTCATGTTCTTGTGGAGATTACTGGTAACTGGAGCTTAGTACGATTGTGTTGTCTTTGACCATTTTTGGTTGATTCACTCTATAGGCAATTAGGCATGTGCATAAGAGAGAGAACCAGCATTGCATTCCAACGAGCATCTGGAAGTCCTTTGAAAAATTGCTTGAATTTCTAGTAGATCAGATTGCATCAAAGATGACAGTGATGATGTACAATGGGCTAGTATGCTAGTATCAGAAGGCCGCATTTTACTAGAGAATCCTACCATTCTATTCATCGATCTCCTTTACAGCATCCTGCAAATAACATAGTTAAGAACAGTTAGAATTGGCTTTCGAAAAAGAGAAATTGAAACCCAAAGTGACCACTAACGAAATAAGCATATGTTCAAATACTGCCGAATCCCATTTGTTCAGTATGTGTGATAGATCATAGCAAGTCAATACCTTTGCAAGTCGTGTTACATATGTAGCAGCAATGGCTGTAAATAATAGCCCGATGCCCAGTGTCAGTAGCTGGCTGTTTCCTCCCAAACCGATCTCTGACTCATCTTGCTGTCAAAATGAGAGCCATGTCATGTTTGACGTAAAAAAAGCAGCAGTAAGAACCATATGTTATGATTTCAATAGTCAAGCCACCAGATAAGCATTTCAAGGATAGCATGTGTTCTGCTGCTATGCAATTATGCAAATAGAGAAGGAAGACAAGCAAGATCATTCGGTAATGACATGAAAAATCTCTCCTCACCCCAGACATACAAATGTCGAAGATGTGAACTGCTAAACTAGCGGTGGATCAATTCTACAGGCAGAAAATCGCAAGGGTAAAGAATTCATGGCTTTGAATTAAGACGTACACATATGCAATTCTGGATATGTAAACATCTAAAAATAAGTGTCCTTTGAACACTTCACTACAAAGCAACGGCGATCAGCAAACTGCAAAACACTCCCAGATTCATGGCATGAACCAGCTCTTATTGGATACAATACTATATGAGAAAGCACATATGGTAAGACAGGCATTCGTAGAAAATAGAAACAAAGTACAAAAATACCACTGATCAGCCATTAGGAGCTGAAAGAGTTCTGTGGTTCAATAGATGTGGTTTTCATTGAACAGAATGGATGAAATGGCGATGGAAGTACGTTTGTGCTGGCAATGAACTAAAATAATTCAATGTGTTTAAGAACTTACAATTATAGCTCGTCCAAATGCACCAGCACTGACATAGGCCCATGATCCTGGAAGCATTCCCAACCAACTGCATGACAATGGTAGAAAGATATCTGAGCCAACAAGGTTTTGACAAAAAGGTACTATTGACGATCCTTCAATTTTTGCCCTTTAAAGGGATATAAGATTTGCAATGGATTATTGGTATCTTTAACGGGTATATGATTTTTACTACCCTTTTGGTCTTATAAATTGCATTACTACCAAGTAGAGTCGTTATACTGAGACCATATTGCTGTTCCTGTTTGTTTGACAGAAAATGCCATACTGGAATCATGGAAGAACAGGAGTTGGTAGAAACTAACCTTCCCAAGACATAAGGCAAGAACTTCACTGAAGTCAAGCCATACAAGTAGTTCCCAAGAGAGAAAGGTAATAGGGGACTAAGCCGCAGCAGAGTAACAACCTTAAATCCATTTTCACCTATTGCTTTGTCAATTGCCAGAAACTTCTTGTTTCCTTCAACCAATTTGAGAATTCGCTCTCTGGCAAAGTATCTAGCAATAAGAAAGGCCACTGCTGCAGCTAGCTGCACAGTTGGCAAAGCACAATAAGAAAATGCAGCTGAAGGCAGAGTTAACAACAGAATGCTGTTGATGTGGATTTACTTACTGTCCCGCTGATTGAGACAATAACTGTACCAGTAATACTACCAAACAATAGACCTGCTGACATTGTTAATGGTATCGCTGGAATCGCAAGGACCTGAATTCAAAGAAAATCATAGTATTATTATGAAGGTGAAGTTCCAATCCAGATGTCAAGAATATATGACAAAAGCCTGTACAAATGGTTGACAGGGCTAAATGTAGATCGTTAGTTTATTTCAGAGTTCACCAATATCAAACAAAGAAAGAAATGGATGCCCTCTATCAAGAAGTGGCTTTATCCAAAACAAAAGTGCCTATTGCCTACTCACTCATATTCAAACATTTTGGCACAACAAATTTACAATGTGTGTGTGTGTGTGTGTGTGTGTAACTGAAAGGCAAAAATATCAGCCTTACACTATCACTGTAATTGACTAGCTAGTTTAGGTGAAAATTATAGAAACAAAGACACTGTACAGCATCAATGAAAGTAAAATTAGCTAGCAAAAGGACATACCTCCAATCCTGCATACACTAG More
CDS seq		ATGCACACGAGCTCTTGTTTTGTCCTGAAGAAACGACGTCTTCAGAGGAATGATGAGACGGCACCGGAGCCGGCGATGGCGTCGCCGGGCGGGAAGGGGCTGGTCGCGTGCAACGCGGCCATCTCCCGCTGCTCGCGCGCGGGGCTGCACCGGCGGGCGCTGGCGCTGTTCACCGAGATGCGCGCGCGGGGACTCCGCGCCGACGAGTACACCCTCCCGCCGATCCTCAACTCCGCCGCGCTGCTCCGCGCCCCGCCCGCGGCGGCGCTCCACGCGCTCCTCCTCCGCGCGGGGCTCGCGTCGCACCTCCATGTCGCCAACGCCCTCGTCGACGCCTACGCCAAGCTGTCCCGCCTCGGAGCCGCGCGGGCGGTGTTCGACGAAATGCCGCGCCGGGACGTGGTCACCTGGACCTCCCTCGTCACCGGGCTCGCCCGCGCCGGATCCCACGGCCTGGCCGTTCGCGCCTACCGCGACATGGTCGCCGCTGGGGTCGCCACCGACGAGTTCGCCGTCGCGGCCGTGCTCAGCTCGTGCGCCGGCTCGACCGCGCTCGAGCTGGGCCGGTCGGTGCACGCCGCGGCGGTCCGGTCCGGGCACGAGCCGTTCCTCTCGGTCGGCAACTCGCTCGTGTCCATGTACGCCAAGACCGGCTCGCTCCGCGACGCGCGCACGGTGTTCGACGCGATGCGCTCCCGGTGCGCCATCACGTGGACGGCGCTGATCGTCGGGTACGCGCAGAACGGCCGGGGCAGGGAGTCCCTCGCCGTCTACGCCGACATGGCCCGCTCCGGCTGCAGGCCGGACTACGTCACCTTCGTCGGCCTGCTCTTCGCCTGCAGCCACGCCGGGCTGCTCGACGCCGGCCGCGCCCACTTCCAGTCCATGCAATCCGAGCACGGCATCTCCCCGGGGCCGGACCACTACGCCTGCATGGTCGACCTGCTCGGCCGCGCCGGCCGCCTCGGCGAGGCCGTCGACCTGCTCGACCGGAGCCCGGCGGCCGAGCTGGACGCCACGGTCTGGAAGGCCCTCCTCGCCGCGTGCCGGACTCACCGGAACGCGGCGCTCGCCGAGCGCGCGGCCGGGATGGTGTGGAGGCTGGATCCGACGGACGCCGTGCCGTACGTCATGCTGTCCAACCTCTACTCGCGGGCGCGGCGGTGGGGCGACGTGGCGAGGGTGCGCGCGCTGATGAGGTCGCGGGGCATCAGCAAGGAGCCCGGGTGCAGCTGGGTGGTGGTCGCCGGCGTGACGCACGTGTTCCACGCCGGGGACAGGGATCACCAGCGGGCGGCGGAGATCTACCGGAAGGCGGAGGAGATGGCGGCGAGGATCCGGGCTCGGGGGCACGTGCCGGACACCGAGTGGGCGCTGCAGGACGAGGCGCCGGAGGGGAGGGAGATGGGGCTGGCTCACCACGGCGAGAGGCTCGCCGTCGCGTTCGGCCTCCTCGCCGTGCCAGCCGCCGCGCCCATCCGCGTGTACAAGAACCTCCGGGTGTGCGGCGACTGCCACGCCGCGATCAAGATGGTCGCCGAGGTGTACGGCAGGGAGATCATACTGAGAGACTCCAACTGCTTCCATCACATGAAGGATGGTTCATGTTCTTGTGGAGATTACTGGTAA More
Protein seq		MHTSSCFVLKKRRLQRNDETAPEPAMASPGGKGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALHALLLRAGLASHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDATVWKALLAACRTHRNAALAERAAGMVWRLDPTDAVPYVMLSNLYSRARRWGDVARVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHVPDTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMVAEVYGREIILRDSNCFHHMKDGSCSCGDYW
Function		Pentatricopeptide repeat-containing protein At2g03880, mitochondrial [UniProtKB/Swiss-Prot:Q9SI53]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_01G0633100	OsZS97_01T0633100.1	Chr01	40029866	40034376	+	makerRMon
CDS seq	ATGGCGTCGCCGGGCGGGAAGGGGCTGGTCGCGTGCAACGCGGCCATCTCCCGCTGCTCGCGCGCGGGGCTGCACCGGCGGGCGCTGGCGCTGTTCACCGAGATGCGCGCGCGGGGACTCCGCGCCGACGAGTACACCCTCCCGCCGATCCTCAACTCCGCCGCGCTGCTCCGCGCCCCGCCCGCGGCGGCGCTCCACGCGCTCCTCCTCCGCGCGGGGCTCGCGTCGCACCTCCATGTCGCCAACGCCCTCGTCGACGCCTACGCCAAGCTGTCCCGCCTCGGAGCCGCGCGGGCGGTGTTCGACGAAATGCCGCGCCGGGACGTGGTCACCTGGACCTCCCTCGTCACCGGGCTCGCCCGCGCCGGATCCCACGGCCTGGCCGTTCGCGCCTACCGCGACATGGTCGCCGCTGGGGTCGCCACCGACGAGTTCGCCGTCGCGGCCGTGCTCAGCTCGTGCGCCGGCTCGACCGCGCTCGAGCTGGGCCGGTCGGTGCACGCCGCGGCGGTCCGGTCCGGGCACGAGCCGTTCCTCTCGGTCGGCAACTCGCTCGTGTCCATGTACGCCAAGACCGGCTCGCTCCGCGACGCGCGCACGGTGTTCGACGCGATGCGCTCCCGGTGCGCCATCACGTGGACGGCGCTGATCGTCGGGTACGCGCAGAACGGCCGGGGCAGGGAGTCCCTCGCCGTCTACGCCGACATGGCCCGCTCCGGCTGCAGGCCGGACTACGTCACCTTCGTCGGCCTGCTCTTCGCCTGCAGCCACGCCGGGCTGCTCGACGCCGGCCGCGCCCACTTCCAGTCCATGCAATCCGAGCACGGCATCTCCCCGGGGCCGGACCACTACGCCTGCATGGTCGACCTGCTCGGCCGCGCCGGCCGCCTCGGCGAGGCCGTCGACCTGCTCGACCGGAGCCCGGCGGCCGAGCTGGACGCCACGGTCTGGAAGGCCCTCCTCGCCGCGTGCCGGACTCACCGGAACGCGGCGCTCGCCGAGCGCGCGGCCGGGATGGTGTGGAGGCTGGATCCGACGGACGCCGTGCCGTACGTCATGCTGTCCAACCTCTACTCGCGGGCGCGGCGGTGGGGCGACGTGGCGAGGGTGCGCGCGCTGATGAGGTCGCGGGGCATCAGCAAGGAGCCCGGGTGCAGCTGGGTGGTGGTCGCCGGCGTGACGCACGTGTTCCACGCCGGGGACAGGGATCACCAGCGGGCGGCGGAGATCTACCGGAAGGCGGAGGAGATGGCGGCGAGGATCCGGGCTCGGGGGCACGTGCCGGACACCGAGTGGGCGCTGCAGGACGAGGCGCCGGAGGGGAGGGAGATGGGGCTGGCTCACCACGGCGAGAGGCTCGCCGTCGCGTTCGGCCTCCTCGCCGTGCCAGCCGCCGCGCCCATCCGCGTGTACAAGAACCTCCGGGTGTGCGGCGACTGCCACGCCGCGATCAAGATGGTCGCCGAGGTGTACGGCAGGGAGATCATACTGAGAGACTCCAACTGCTTCCATCACATGAAGGATGGTTCATGTTCTTGTGGAGATTACTGGTAA More
Protein seq	MASPGGKGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALHALLLRAGLASHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDATVWKALLAACRTHRNAALAERAAGMVWRLDPTDAVPYVMLSNLYSRARRWGDVARVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHVPDTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMVAEVYGREIILRDSNCFHHMKDGSCSCGDYW More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_01G0633100	OsZS97_01T0633100.2	Chr01	40029766	40034376	+	makerRMon
CDS seq	ATGCACACGAGCTCTTGTTTTGTCCTGAAGAAACGACGTCTTCAGAGGAATGATGAGACGGCACCGGAGCCGGCGATGGCGTCGCCGGGCGGGAAGGGGCTGGTCGCGTGCAACGCGGCCATCTCCCGCTGCTCGCGCGCGGGGCTGCACCGGCGGGCGCTGGCGCTGTTCACCGAGATGCGCGCGCGGGGACTCCGCGCCGACGAGTACACCCTCCCGCCGATCCTCAACTCCGCCGCGCTGCTCCGCGCCCCGCCCGCGGCGGCGCTCCACGCGCTCCTCCTCCGCGCGGGGCTCGCGTCGCACCTCCATGTCGCCAACGCCCTCGTCGACGCCTACGCCAAGCTGTCCCGCCTCGGAGCCGCGCGGGCGGTGTTCGACGAAATGCCGCGCCGGGACGTGGTCACCTGGACCTCCCTCGTCACCGGGCTCGCCCGCGCCGGATCCCACGGCCTGGCCGTTCGCGCCTACCGCGACATGGTCGCCGCTGGGGTCGCCACCGACGAGTTCGCCGTCGCGGCCGTGCTCAGCTCGTGCGCCGGCTCGACCGCGCTCGAGCTGGGCCGGTCGGTGCACGCCGCGGCGGTCCGGTCCGGGCACGAGCCGTTCCTCTCGGTCGGCAACTCGCTCGTGTCCATGTACGCCAAGACCGGCTCGCTCCGCGACGCGCGCACGGTGTTCGACGCGATGCGCTCCCGGTGCGCCATCACGTGGACGGCGCTGATCGTCGGGTACGCGCAGAACGGCCGGGGCAGGGAGTCCCTCGCCGTCTACGCCGACATGGCCCGCTCCGGCTGCAGGCCGGACTACGTCACCTTCGTCGGCCTGCTCTTCGCCTGCAGCCACGCCGGGCTGCTCGACGCCGGCCGCGCCCACTTCCAGTCCATGCAATCCGAGCACGGCATCTCCCCGGGGCCGGACCACTACGCCTGCATGGTCGACCTGCTCGGCCGCGCCGGCCGCCTCGGCGAGGCCGTCGACCTGCTCGACCGGAGCCCGGCGGCCGAGCTGGACGCCACGGTCTGGAAGGCCCTCCTCGCCGCGTGCCGGACTCACCGGAACGCGGCGCTCGCCGAGCGCGCGGCCGGGATGGTGTGGAGGCTGGATCCGACGGACGCCGTGCCGTACGTCATGCTGTCCAACCTCTACTCGCGGGCGCGGCGGTGGGGCGACGTGGCGAGGGTGCGCGCGCTGATGAGGTCGCGGGGCATCAGCAAGGAGCCCGGGTGCAGCTGGGTGGTGGTCGCCGGCGTGACGCACGTGTTCCACGCCGGGGACAGGGATCACCAGCGGGCGGCGGAGATCTACCGGAAGGCGGAGGAGATGGCGGCGAGGATCCGGGCTCGGGGGCACGTGCCGGACACCGAGTGGGCGCTGCAGGACGAGGCGCCGGAGGGGAGGGAGATGGGGCTGGCTCACCACGGCGAGAGGCTCGCCGTCGCGTTCGGCCTCCTCGCCGTGCCAGCCGCCGCGCCCATCCGCGTGTACAAGAACCTCCGGGTGTGCGGCGACTGCCACGCCGCGATCAAGATGGTCGCCGAGGTGTACGGCAGGGAGATCATACTGAGAGACTCCAACTGCTTCCATCACATGAAGGATGGTTCATGTTCTTGTGGAGATTACTGGTAA More
Protein seq	MHTSSCFVLKKRRLQRNDETAPEPAMASPGGKGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALHALLLRAGLASHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDATVWKALLAACRTHRNAALAERAAGMVWRLDPTDAVPYVMLSNLYSRARRWGDVARVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHVPDTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMVAEVYGREIILRDSNCFHHMKDGSCSCGDYW More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_01G0633100	OsZS97_01T0633100.3	Chr01	40029866	40034376	+	makerRMon
CDS seq	ATGGCGTCGCCGGGCGGGAAGGGGCTGGTCGCGTGCAACGCGGCCATCTCCCGCTGCTCGCGCGCGGGGCTGCACCGGCGGGCGCTGGCGCTGTTCACCGAGATGCGCGCGCGGGGACTCCGCGCCGACGAGTACACCCTCCCGCCGATCCTCAACTCCGCCGCGCTGCTCCGCGCCCCGCCCGCGGCGGCGCTCCACGCGCTCCTCCTCCGCGCGGGGCTCGCGTCGCACCTCCATGTCGCCAACGCCCTCGTCGACGCCTACGCCAAGCTGTCCCGCCTCGGAGCCGCGCGGGCGGTGTTCGACGAAATGCCGCGCCGGGACGTGGTCACCTGGACCTCCCTCGTCACCGGGCTCGCCCGCGCCGGATCCCACGGCCTGGCCGTTCGCGCCTACCGCGACATGGTCGCCGCTGGGGTCGCCACCGACGAGTTCGCCGTCGCGGCCGTGCTCAGCTCGTGCGCCGGCTCGACCGCGCTCGAGCTGGGCCGGTCGGTGCACGCCGCGGCGGTCCGGTCCGGGCACGAGCCGTTCCTCTCGGTCGGCAACTCGCTCGTGTCCATGTACGCCAAGACCGGCTCGCTCCGCGACGCGCGCACGGTGTTCGACGCGATGCGCTCCCGGTGCGCCATCACGTGGACGGCGCTGATCGTCGGGTACGCGCAGAACGGCCGGGGCAGGGAGTCCCTCGCCGTCTACGCCGACATGGCCCGCTCCGGCTGCAGGCCGGACTACGTCACCTTCGTCGGCCTGCTCTTCGCCTGCAGCCACGCCGGGCTGCTCGACGCCGGCCGCGCCCACTTCCAGTCCATGCAATCCGAGCACGGCATCTCCCCGGGGCCGGACCACTACGCCTGCATGGTCGACCTGCTCGGCCGCGCCGGCCGCCTCGGCGAGGCCGTCGACCTGCTCGACCGGAGCCCGGCGGCCGAGCTGGACGCCACGGTCTGGAAGGCCCTCCTCGCCGCGTGCCGGACTCACCGGAACGCGGCGCTCGCCGAGCGCGCGGCCGGGATGGTGTGGAGGCTGGATCCGACGGACGCCGTGCCGTACGTCATGCTGTCCAACCTCTACTCGCGGGCGCGGCGGTGGGGCGACGTGGCGAGGGTGCGCGCGCTGATGAGGTCGCGGGGCATCAGCAAGGAGCCCGGGTGCAGCTGGGTGGTGGTCGCCGGCGTGACGCACGTGTTCCACGCCGGGGACAGGGATCACCAGCGGGCGGCGGAGATCTACCGGAAGGCGGAGGAGATGGCGGCGAGGATCCGGGCTCGGGGGCACGTGCCGGACACCGAGTGGGCGCTGCAGGACGAGGCGCCGGAGGGGAGGGAGATGGGGCTGGCTCACCACGGCGAGAGGCTCGCCGTCGCGTTCGGCCTCCTCGCCGTGCCAGCCGCCGCGCCCATCCGCGTGTACAAGAACCTCCGGGTGTGCGGCGACTGCCACGCCGCGATCAAGATGGTCGCCGAGGTGTACGGCAGGGAGATCATACTGAGAGACTCCAACTGCTTCCATCACATGAAGGATGGTTCATGTTCTTGTGGAGATTACTGGTAA More
Protein seq	MASPGGKGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALHALLLRAGLASHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDATVWKALLAACRTHRNAALAERAAGMVWRLDPTDAVPYVMLSNLYSRARRWGDVARVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHVPDTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMVAEVYGREIILRDSNCFHHMKDGSCSCGDYW More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	1.555667	1.52039	2.139039

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0884800	RBH	0.000000	0.091105	0.000000
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g66160	RBH	0.000000	0.319029	0.000000
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0884800	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0042760	RBH	0.058816	0.000000	0.000000
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0042320	RBH	0.000000	0.000000	0.197549
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0042660	RBH	0.000000	1.380472	0.000000
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0042130	RBH	0.000000	0.000000	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0041700	RBH	0.482928	0.000000	0.000000
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0493000	SBH	0.331599	0.5147595	0.894902
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0041340	RBH	0.029955	0.099317	0.103351
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_05G0323500	RBH	0.022008	0.0227015	0.287934
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0041710	RBH	0.000000	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0041640	RBH	0.112942	1.870613	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0041910	RBH	1.458658	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0041850	RBH	0.110732	0.073909	0.000000
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0041730	RBH	0.058098	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G042120	RBH	0.000000	0.000000	0.000000
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0041810	RBH	0.000000	0.000000	0.000000

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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