Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_01G0452800 | OGI:01084630 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:29336487-29337329 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCACCATCCAAGAATACCATCTCTTATGCTTATCCCCTTTGCTTCATCTTCATCCTTTCCACCACCACTCTATCTGTGGCTATTTCCACCTCCTACTCTTCTCGTTGCTCCTCCCCGTCCCCTGCATCCGACTACCATACTGACTATGTCGACACCCTTGCACTCCTCCGCTCCTTCCAGATATCCATCGGCTACTTCTCTAGCGGAGGCAATAGCTTATTCTCTGCTGATGATGACTACGTCAATCCCCGCTCGTTCTCCTTTGTTCCCCATGGTGTTTTCCGCACCAAGGACCCAACTATCATCCACCTAACTGCGACCCTTGTACTCTCTGGCCCTCGTAGCAGCACTTACATCGGCCATCGCCACCATCGTTACTCTATCACCCAAACCATCTCGTTTATCCTTGATGGTTATTATTCTTTCACCTCCAATGATCTTTGCATGGTTGGCTTCGGCACTAACTATGCTGCAGATGGCTCTATAAAACTACATGAGGATTCTGTCCTTCGCCTACGGGTTCCTCGACCTTCCAAGCTCACCAACCCCTTAGTTACCGGTCACCTCGAGGGCACCAACTTTGAGACCATCTCGCTTGTTGCTTACGACGAAAGCGACAACTATGTGTATAGTGAGAATGCCCTCTGCCCACCATTCATGTTGGAGAATAGTATGCTTGAACAGGCTCAGGCAGTCAAAGAAAACTTCAATTGTGACCAGCTCAAGACACATCTTAGAAGGTTGTATAAGCTGGAATACATGGTTGATGACTCCTTGGCACCAAGAGGCTACAATATTTGGTCGCACGCCACTAGAATGTACATCAACCACGTGCACTGA
More
|
||||||||||
| CDS seq | ATGGCACCATCCAAGAATACCATCTCTTATGCTTATCCCCTTTGCTTCATCTTCATCCTTTCCACCACCACTCTATCTGTGGCTATTTCCACCTCCTACTCTTCTCGTTGCTCCTCCCCGTCCCCTGCATCCGACTACCATACTGACTATGTCGACACCCTTGCACTCCTCCGCTCCTTCCAGATATCCATCGGCTACTTCTCTAGCGGAGGCAATAGCTTATTCTCTGCTGATGATGACTACGTCAATCCCCGCTCGTTCTCCTTTGTTCCCCATGGTGTTTTCCGCACCAAGGACCCAACTATCATCCACCTAACTGCGACCCTTGTACTCTCTGGCCCTCGTAGCAGCACTTACATCGGCCATCGCCACCATCGTTACTCTATCACCCAAACCATCTCGTTTATCCTTGATGGTTATTATTCTTTCACCTCCAATGATCTTTGCATGGTTGGCTTCGGCACTAACTATGCTGCAGATGGCTCTATAAAACTACATGAGGATTCTGTCCTTCGCCTACGGGTTCCTCGACCTTCCAAGCTCACCAACCCCTTAGTTACCGGTCACCTCGAGGGCACCAACTTTGAGACCATCTCGCTTGTTGCTTACGACGAAAGCGACAACTATGTGTATAGTGAGAATGCCCTCTGCCCACCATTCATGTTGGAGAATAGTATGCTTGAACAGGCTCAGGCAGTCAAAGAAAACTTCAATTGTGACCAGCTCAAGACACATCTTAGAAGGTTGTATAAGCTGGAATACATGGTTGATGACTCCTTGGCACCAAGAGGCTACAATATTTGGTCGCACGCCACTAGAATGTACATCAACCACGTGCACTGA
More
|
||||||||||
| Protein seq | MAPSKNTISYAYPLCFIFILSTTTLSVAISTSYSSRCSSPSPASDYHTDYVDTLALLRSFQISIGYFSSGGNSLFSADDDYVNPRSFSFVPHGVFRTKDPTIIHLTATLVLSGPRSSTYIGHRHHRYSITQTISFILDGYYSFTSNDLCMVGFGTNYAADGSIKLHEDSVLRLRVPRPSKLTNPLVTGHLEGTNFETISLVAYDESDNYVYSENALCPPFMLENSMLEQAQAVKENFNCDQLKTHLRRLYKLEYMVDDSLAPRGYNIWSHATRMYINHVH |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0452800 | OsZS97_01T0452800.1 | Chr01 | 29336487 | 29337329 | + | makerRMon | ||
| CDS seq | ATGGCACCATCCAAGAATACCATCTCTTATGCTTATCCCCTTTGCTTCATCTTCATCCTTTCCACCACCACTCTATCTGTGGCTATTTCCACCTCCTACTCTTCTCGTTGCTCCTCCCCGTCCCCTGCATCCGACTACCATACTGACTATGTCGACACCCTTGCACTCCTCCGCTCCTTCCAGATATCCATCGGCTACTTCTCTAGCGGAGGCAATAGCTTATTCTCTGCTGATGATGACTACGTCAATCCCCGCTCGTTCTCCTTTGTTCCCCATGGTGTTTTCCGCACCAAGGACCCAACTATCATCCACCTAACTGCGACCCTTGTACTCTCTGGCCCTCGTAGCAGCACTTACATCGGCCATCGCCACCATCGTTACTCTATCACCCAAACCATCTCGTTTATCCTTGATGGTTATTATTCTTTCACCTCCAATGATCTTTGCATGGTTGGCTTCGGCACTAACTATGCTGCAGATGGCTCTATAAAACTACATGAGGATTCTGTCCTTCGCCTACGGGTTCCTCGACCTTCCAAGCTCACCAACCCCTTAGTTACCGGTCACCTCGAGGGCACCAACTTTGAGACCATCTCGCTTGTTGCTTACGACGAAAGCGACAACTATGTGTATAGTGAGAATGCCCTCTGCCCACCATTCATGTTGGAGAATAGTATGCTTGAACAGGCTCAGGCAGTCAAAGAAAACTTCAATTGTGACCAGCTCAAGACACATCTTAGAAGGTTGTATAAGCTGGAATACATGGTTGATGACTCCTTGGCACCAAGAGGCTACAATATTTGGTCGCACGCCACTAGAATGTACATCAACCACGTGCACTGA
More
|
|||||||
| Protein seq | MAPSKNTISYAYPLCFIFILSTTTLSVAISTSYSSRCSSPSPASDYHTDYVDTLALLRSFQISIGYFSSGGNSLFSADDDYVNPRSFSFVPHGVFRTKDPTIIHLTATLVLSGPRSSTYIGHRHHRYSITQTISFILDGYYSFTSNDLCMVGFGTNYAADGSIKLHEDSVLRLRVPRPSKLTNPLVTGHLEGTNFETISLVAYDESDNYVYSENALCPPFMLENSMLEQAQAVKENFNCDQLKTHLRRLYKLEYMVDDSLAPRGYNIWSHATRMYINHVH
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.842175 | 1.3488575 | 0.0055235 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0678000 | RBH | 0.180646 | 0.277273 | 0.220761 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g48620 | RBH | 0.117011 | 0.119149 | 0.054432 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0678000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0029020 | RBH | 0.790318 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0028600 | RBH | 0.113441 | 0.0 | 0.135474 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0029000 | RBH | 3.418253 | 0.0 | 0.229546 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0028240 | SBH | 0.933957 | 0.008070 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0027930 | SBH | 2.897933 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0464000 | RBH | 3.232344 | 1.150399 | 0.1768055 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0027670 | SBH | 0.432910 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0442200 | SBH | 4.619743 | 8.1731155 | 8.1985425 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0027960 | SBH | 0.055892 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0027830 | RBH | 1.947519 | 1.091805 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0028130 | SBH | 1.436052 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0028270 | RBH | 0.295584 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0028020 | SBH | 0.284809 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G028530 | SBH | 1.017380 | 0.0 | 0.232531 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0028200 | SBH | 4.527191 | 0.0 | 0.257096 |
