Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_01G0224300 | OGI:01042190 | 6/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:13853440-13856194 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTCCACTGCTAGTCTGAGCACGTAGTTTAATTTGTTGCTTTCGAGGCTCGAGTATTTTTTTTTTCATTTTTTTCTGTTAGAAGATCGAAACTCAACCTCTACGCTCAAACCACATAAGTATTTTTTTTCCATAGCACTGCCATTGACTTTACCAAATCAAAGTCTTCGCTGCTTGTTGGTTTCATTGTGTCTTGCGCGTGAGTTGCTTGCCCATTCAGTTTCAATATGTTTCCAGTGCGGCGATGAAACTGTCTCTGCAATTTCGTGGAAGCAGCTCAAAACTATGAAAGTTCAAGCACGAGTAATCTTGAAATCCATCCCTTGTTTGTTTTTCTGGTCGTTCTTTTTCTGTAGTGGACAGTGGTTTTCTTGAGGTGTTCAGGCAAAACATTTCCATGCTTTTGTAGCGATTCCTCCAGTCATATTGGGCATTCTTCTGATAGCGTATTGCGACTCGGTACCGTACGTGTTAGTAGTGTTCGATTAATCGCCGAGGATTTGAGATGGTAAGCAGTTTCAATCCCCAGTCATCTGTTGCATCGTTATTTCTCTCTGTTTTCGATTGCACTCCTGCGTCCTTTGCATATCTTAAAACTTTCTGCCGAACAGATTTTAGTTGGGTACAGGTGGTGAGGTACTAGTAGTAGTAGTAAAATAGCGTAATGCAGATACTGAACTCTTAACGTTATTTAGATGATGACAGAAGTGATTATATGAAGATTCACAGGATGATCCCCTCCAGCTTTACTTGGTCACCACAACTTTTAGAAAGTGAATGACCAATGGTACACTATTTGAGAACACTTCTACTGACTTCTAGGGTCAGGCCTGATCATAGTAACCCTATCTTAATTTCTTCAGAATCCCCTGGCTTGATGGTTGCAGTTTGTTTCTTTTTTTCCACTCTCACAGAAACTTTTTCTGTCCCAGGATGCTCTGATGAAACGCTCCCGCTCTTTCGCGGAGGCGGTGGTGATCATGGTGTGCCCGGTGCTTCTCGCCATCGCGCTCAAGAAGGTTGACCTGAAGAGCCAGGAGCACGGGCCGGCCATCCCGATCGCCATGCTTGTCATGGCAGCCATCACGCTGATATCCGGCACATTCCCCTTCCTGGCACTCTGCTTCTCCAAGAGGTTCGTCGCCAATGGCACGTGGAGGCTCCCTACAACGGCGACCAACTGCCTGGTCCCCTTCTCCTGTGCGTGCCTCATCGTCCTCGCGTGCTGGGTCATACGCCTCATCCTCTCCGAGCGCTGGGCCAACGTCTTCCCCGCCATTGGAAGCGTGCTCGTGCTCTGCATCCTGGTCCGTACTGTCGTCTACTGCCGTGCACGGGTTGACCCGGTTGACGATGGCGAGCTGGATGGTAAGCTGGACAACTCGCTGGAGTTCTTGGCCGGAGTCACGGCGCTGCTGTTCTTGGGGCTGGAAGGGCTGGCGCTGGAGGGACAGAGCAATGGCGGACAGGGAGGAGGGCAGCATCGTCTCGCCGCGCCCCTGGGAGTGAGCTTCGTCGCTTGCGTGTTTGGCGTGTCGCTCATGCTCGTCGAGACGATCCCGCCTCTCCCAGATGAAGAAGCCCATGGCAACGACGTAGGCGTCCATGTCGTCATCGTGTCCAACCTTACCGTGATATTTGACATCGTCATGGCTCTCGCTGTCTCGGCGGTCATGTGGTCCGTCATGCACGCGATCGTGGAGCTGCGGGCGCTCCTGTTGGTGTTACCGCTCTTCCTCATCTTGCTGGTGCGTGCATACGATGTCGTTGTCGGCGCCGGTGGCGGTGGCGGTGTCGGTGTCGGTGGTGGAGAGGATGAAAAGCCGGCGTCGATGGAGCTGACCAAGGTCACGTTCACCGGGTTTCTGGCCGTGTCGATACCAGCTGTCAGGACTGGCTCACTCTGCAGCTCCACCGATTGGTTCCTCATCTTTGCAGCATCCGCCATTGTTTCAGGCTTCGCTTGGAGGCTCCTGACGCACGCCAAGATGGGGACGACGGCCAATTTCGCTTCCTTCTGCACACATTTCTGCATTGCCATTGCAACGGTGCCATTCACAGTTATGGCCGTAAAGGCTCTGCACTGATTTTTATTTTTATTTTTTTGGTACAAGGGGGATAACTTGGAGCATCACTTTGACAAGCAAAAGCAGAGCTGATATAATTATAACCTGCTATGCGGTTTAGTGTAAAATTTGCAACTCACTTTCCGTCCAAGAAGAATGTCATTTTAGACCGGTGAACCCTAATTCCCTATTCTCTCATTCGTTTTCCTCCATTCCCCGTCCCCTTTCTGGGAGCCAGGTGGAGAGACCGAGGTGGTGGCCATGGTGTTCCAGCGGAGCGTACTCGTGCACGGCGGTTCTTCCATCGTGCCATCCATGGTGGTTGCATCACATGTCACATCCTTGCATACCAGGGTTTGAATAATGATTGGATGTGAGTAGAGTACATGGTTGTGTTGATTGTGCTCGGGACAATTAAGGACCGGTTCGCGAGGTACTGTTGTCAAGCATTCATCCTACTAACCATAAGCTACCACGGGTGCATGCCATGATGTGTTGTTTCAGATCGCAGATTATAAGATCATAGTGGCAGAATATAAATCCATATTATATTTTAGGCGCTAAGTAGTTTCCTTGTCTAAGATAATTGGCCACCCCTAATGGAAACAGATTTGCTTACTGCGCGTTCACTTTGTTGGGCGTATAGTGTGAAGGGTCTTGTCACGTCCTTCATGTTGAGTATCAAAGTCAT
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| CDS seq | ATGAAAGTTCAAGCACGAAAACTTTTTCTGTCCCAGGATGCTCTGATGAAACGCTCCCGCTCTTTCGCGGAGGCGGTGGTGATCATGGTGTGCCCGGTGCTTCTCGCCATCGCGCTCAAGAAGGTTGACCTGAAGAGCCAGGAGCACGGGCCGGCCATCCCGATCGCCATGCTTGTCATGGCAGCCATCACGCTGATATCCGGCACATTCCCCTTCCTGGCACTCTGCTTCTCCAAGAGGTTCGTCGCCAATGGCACGTGGAGGCTCCCTACAACGGCGACCAACTGCCTGGTCCCCTTCTCCTGTGCGTGCCTCATCGTCCTCGCGTGCTGGGTCATACGCCTCATCCTCTCCGAGCGCTGGGCCAACGTCTTCCCCGCCATTGGAAGCGTGCTCGTGCTCTGCATCCTGGTCCGTACTGTCGTCTACTGCCGTGCACGGGTTGACCCGGTTGACGATGGCGAGCTGGATGGTAAGCTGGACAACTCGCTGGAGTTCTTGGCCGGAGTCACGGCGCTGCTGTTCTTGGGGCTGGAAGGGCTGGCGCTGGAGGGACAGAGCAATGGCGGACAGGGAGGAGGGCAGCATCGTCTCGCCGCGCCCCTGGGAGTGAGCTTCGTCGCTTGCGTGTTTGGCGTGTCGCTCATGCTCGTCGAGACGATCCCGCCTCTCCCAGATGAAGAAGCCCATGGCAACGACGTAGGCGTCCATGTCGTCATCGTGTCCAACCTTACCGTGATATTTGACATCGTCATGGCTCTCGCTGTCTCGGCGGTCATGTGGTCCGTCATGCACGCGATCGTGGAGCTGCGGGCGCTCCTGTTGGTGTTACCGCTCTTCCTCATCTTGCTGGTGCGTGCATACGATGTCGTTGTCGGCGCCGGTGGCGGTGGCGGTGTCGGTGTCGGTGGTGGAGAGGATGAAAAGCCGGCGTCGATGGAGCTGACCAAGGTCACGTTCACCGGGTTTCTGGCCGTGTCGATACCAGCTGTCAGGACTGGCTCACTCTGCAGCTCCACCGATTGGTTCCTCATCTTTGCAGCATCCGCCATTGTTTCAGGCTTCGCTTGGAGGCTCCTGACGCACGCCAAGATGGGGACGACGGCCAATTTCGCTTCCTTCTGCACACATTTCTGCATTGCCATTGCAACGGTGCCATTCACAGTTATGGCCGTAAAGGCTCTGCACTGA
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| Protein seq | MKVQARKLFLSQDALMKRSRSFAEAVVIMVCPVLLAIALKKVDLKSQEHGPAIPIAMLVMAAITLISGTFPFLALCFSKRFVANGTWRLPTTATNCLVPFSCACLIVLACWVIRLILSERWANVFPAIGSVLVLCILVRTVVYCRARVDPVDDGELDGKLDNSLEFLAGVTALLFLGLEGLALEGQSNGGQGGGQHRLAAPLGVSFVACVFGVSLMLVETIPPLPDEEAHGNDVGVHVVIVSNLTVIFDIVMALAVSAVMWSVMHAIVELRALLLVLPLFLILLVRAYDVVVGAGGGGGVGVGGGEDEKPASMELTKVTFTGFLAVSIPAVRTGSLCSSTDWFLIFAASAIVSGFAWRLLTHAKMGTTANFASFCTHFCIAIATVPFTVMAVKALH |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0224300 | OsZS97_01T0224300.1 | Chr01 | 13853440 | 13856194 | + | makerRMon | ||
| CDS seq | ATGAAAGTTCAAGCACGAGATGCTCTGATGAAACGCTCCCGCTCTTTCGCGGAGGCGGTGGTGATCATGGTGTGCCCGGTGCTTCTCGCCATCGCGCTCAAGAAGGTTGACCTGAAGAGCCAGGAGCACGGGCCGGCCATCCCGATCGCCATGCTTGTCATGGCAGCCATCACGCTGATATCCGGCACATTCCCCTTCCTGGCACTCTGCTTCTCCAAGAGGTTCGTCGCCAATGGCACGTGGAGGCTCCCTACAACGGCGACCAACTGCCTGGTCCCCTTCTCCTGTGCGTGCCTCATCGTCCTCGCGTGCTGGGTCATACGCCTCATCCTCTCCGAGCGCTGGGCCAACGTCTTCCCCGCCATTGGAAGCGTGCTCGTGCTCTGCATCCTGGTCCGTACTGTCGTCTACTGCCGTGCACGGGTTGACCCGGTTGACGATGGCGAGCTGGATGGTAAGCTGGACAACTCGCTGGAGTTCTTGGCCGGAGTCACGGCGCTGCTGTTCTTGGGGCTGGAAGGGCTGGCGCTGGAGGGACAGAGCAATGGCGGACAGGGAGGAGGGCAGCATCGTCTCGCCGCGCCCCTGGGAGTGAGCTTCGTCGCTTGCGTGTTTGGCGTGTCGCTCATGCTCGTCGAGACGATCCCGCCTCTCCCAGATGAAGAAGCCCATGGCAACGACGTAGGCGTCCATGTCGTCATCGTGTCCAACCTTACCGTGATATTTGACATCGTCATGGCTCTCGCTGTCTCGGCGGTCATGTGGTCCGTCATGCACGCGATCGTGGAGCTGCGGGCGCTCCTGTTGGTGTTACCGCTCTTCCTCATCTTGCTGGTGCGTGCATACGATGTCGTTGTCGGCGCCGGTGGCGGTGGCGGTGTCGGTGTCGGTGGTGGAGAGGATGAAAAGCCGGCGTCGATGGAGCTGACCAAGGTCACGTTCACCGGGTTTCTGGCCGTGTCGATACCAGCTGTCAGGACTGGCTCACTCTGCAGCTCCACCGATTGGTTCCTCATCTTTGCAGCATCCGCCATTGTTTCAGGCTTCGCTTGGAGGCTCCTGACGCACGCCAAGATGGGGACGACGGCCAATTTCGCTTCCTTCTGCACACATTTCTGCATTGCCATTGCAACGGTGCCATTCACAGTTATGGCCGTAAAGGCTCTGCACTGA
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| Protein seq | MKVQARDALMKRSRSFAEAVVIMVCPVLLAIALKKVDLKSQEHGPAIPIAMLVMAAITLISGTFPFLALCFSKRFVANGTWRLPTTATNCLVPFSCACLIVLACWVIRLILSERWANVFPAIGSVLVLCILVRTVVYCRARVDPVDDGELDGKLDNSLEFLAGVTALLFLGLEGLALEGQSNGGQGGGQHRLAAPLGVSFVACVFGVSLMLVETIPPLPDEEAHGNDVGVHVVIVSNLTVIFDIVMALAVSAVMWSVMHAIVELRALLLVLPLFLILLVRAYDVVVGAGGGGGVGVGGGEDEKPASMELTKVTFTGFLAVSIPAVRTGSLCSSTDWFLIFAASAIVSGFAWRLLTHAKMGTTANFASFCTHFCIAIATVPFTVMAVKALH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0224300 | OsZS97_01T0224300.2 | Chr01 | 13853440 | 13855524 | + | makerRMon | ||
| CDS seq | ATGAAAGTTCAAGCACGAAAACTTTTTCTGTCCCAGGATGCTCTGATGAAACGCTCCCGCTCTTTCGCGGAGGCGGTGGTGATCATGGTGTGCCCGGTGCTTCTCGCCATCGCGCTCAAGAAGGTTGACCTGAAGAGCCAGGAGCACGGGCCGGCCATCCCGATCGCCATGCTTGTCATGGCAGCCATCACGCTGATATCCGGCACATTCCCCTTCCTGGCACTCTGCTTCTCCAAGAGGTTCGTCGCCAATGGCACGTGGAGGCTCCCTACAACGGCGACCAACTGCCTGGTCCCCTTCTCCTGTGCGTGCCTCATCGTCCTCGCGTGCTGGGTCATACGCCTCATCCTCTCCGAGCGCTGGGCCAACGTCTTCCCCGCCATTGGAAGCGTGCTCGTGCTCTGCATCCTGGTCCGTACTGTCGTCTACTGCCGTGCACGGGTTGACCCGGTTGACGATGGCGAGCTGGATGGTAAGCTGGACAACTCGCTGGAGTTCTTGGCCGGAGTCACGGCGCTGCTGTTCTTGGGGCTGGAAGGGCTGGCGCTGGAGGGACAGAGCAATGGCGGACAGGGAGGAGGGCAGCATCGTCTCGCCGCGCCCCTGGGAGTGAGCTTCGTCGCTTGCGTGTTTGGCGTGTCGCTCATGCTCGTCGAGACGATCCCGCCTCTCCCAGATGAAGAAGCCCATGGCAACGACGTAGGCGTCCATGTCGTCATCGTGTCCAACCTTACCGTGATATTTGACATCGTCATGGCTCTCGCTGTCTCGGCGGTCATGTGGTCCGTCATGCACGCGATCGTGGAGCTGCGGGCGCTCCTGTTGGTGTTACCGCTCTTCCTCATCTTGCTGGTGCGTGCATACGATGTCGTTGTCGGCGCCGGTGGCGGTGGCGGTGTCGGTGTCGGTGGTGGAGAGGATGAAAAGCCGGCGTCGATGGAGCTGACCAAGGTCACGTTCACCGGGTTTCTGGCCGTGTCGATACCAGCTGTCAGGACTGGCTCACTCTGCAGCTCCACCGATTGGTTCCTCATCTTTGCAGCATCCGCCATTGTTTCAGGCTTCGCTTGGAGGCTCCTGACGCACGCCAAGATGGGGACGACGGCCAATTTCGCTTCCTTCTGCACACATTTCTGCATTGCCATTGCAACGGTGCCATTCACAGTTATGGCCGTAAAGGCTCTGCACTGA
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| Protein seq | MKVQARKLFLSQDALMKRSRSFAEAVVIMVCPVLLAIALKKVDLKSQEHGPAIPIAMLVMAAITLISGTFPFLALCFSKRFVANGTWRLPTTATNCLVPFSCACLIVLACWVIRLILSERWANVFPAIGSVLVLCILVRTVVYCRARVDPVDDGELDGKLDNSLEFLAGVTALLFLGLEGLALEGQSNGGQGGGQHRLAAPLGVSFVACVFGVSLMLVETIPPLPDEEAHGNDVGVHVVIVSNLTVIFDIVMALAVSAVMWSVMHAIVELRALLLVLPLFLILLVRAYDVVVGAGGGGGVGVGGGEDEKPASMELTKVTFTGFLAVSIPAVRTGSLCSSTDWFLIFAASAIVSGFAWRLLTHAKMGTTANFASFCTHFCIAIATVPFTVMAVKALH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.351414 | 22.9619435 | 0.0184215 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g24420 | SBH | 0.069458 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0015670 | SBH | 0.149901 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0015910 | SBH | 0.736315 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0231400 | SBH | 6.208568 | 30.913702 | 0.046098 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0015470 | SBH | 0.705440 | 0.834063 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0225300 | RBH | 0.1680925 | 1.488586 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0015390 | RBH | 0.028803 | 0.046254 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0015360 | SBH | 1.802931 | 11.800835 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0015570 | SBH | 12.598705 | 6.374400 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0015250 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
