Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_01G0034200 OGI:01006630 | 2/16 Zhenshan 97 | ZS97RS3 | HZAU Chr01:1960796-1963513
Gene Symbol -
DNA seq

TTAGATGCTCTCAGGGTGATGCTCATTCAGGAACTTCCTGACCCAACGAGCACGACGAGCCTCATTCTTCTGAATGTATACAAGGCTTTCAGCCTTCTCCTTAGTTAGATAAGCTAGAACAAGGTCCAGCTGATCCTCACTGAAACCTGGAAGATCCATCACTGTGTTGCACAAATCAGGGTGAACCTCAGTATGTGCAGTAGCGCCTATTGCTGAAGCCATGTTGTTCACTGAATCTGTCATATTGCTGATGAGAGCAACTTCACCTTCATTCAAAGCAGATGCTCTCTTCCTCTTCTTATCTGAGGTAGAATCCTCACCAGTAGGCCCAACACCACTTGCTCGAGCAGCAATTCCAGGACCTTCAGCACCCACACCACTTGGTCCAGCAGCAATACCATCCCCAATAGTGCCATCAAGAGGTCCCAGACCACTGTCAGCCTCACCAGCAGGGTTTCCAAGTGCTTCATTTGACCCCATAGCAAATCTCCCAGTGGCTTGCCTATTTGAAAAAATTATTGCCATTTGTGTATAGTTCTCTAAAGGCACATTGAGAAACTCAGCATCCTTAGGGTGTTCCTATATGAGAACATTAGATTTAAAGTGAGATATGATGTGTACTAATGCAGTGTGTTTTGTATGTGATAGTTAGACACAAACCTTGACATGTCCCATGTAGTGCTCCTCTTCTAGGATAATCGTTGAGGTCTGATCATCCCAAAGAGCCCCACTAAGGTCTTTGAGCCTAGTGATACGCACCCACCTTTGACGCCATTTGCGAAGATGGTTATACACTTGGGTTCCACTAATTTCAATTCCATAGTGATCAGACAAAGATCTAGCAACTTGGTTAAGGTGAGCTTCCTTGAAACCCTTGTCAGTCCTAACACCTGTTGCTATAAGCTCAACCATGCGCCTTAGCATTAAGCTAGACATGTTGGTTGTCCAATGCAAGGCTCCATGGTGTCCACCATGGCCACCATGGCCACCATTCCCGCCACCAGCCTCAGCCATCCTATATTTACCACATGCAAATGAACAAATAAATTTAACATACATCGATAGATGTAATAAACAGCATCATTGCAAATATCTCGAGGTCTCAAATTAATAGATAACAGTGCAACAGGGTACAACAATCATCATGCATGAATAGATAACAGTGCAACACCATCCTAAGTTCACAGATAGATAGTTACAAATTAATCCCTAAGCATGTCAGACCCTGGACGACCCTCTATTGTTCCACATAGCACCAGCCAAATCATCCCTAATTTGCGCCATTCCCCTATTGTCTTCATCTAAGTCATCGGGCTCCTCATCATCACTATCTGAGTTCCAATCACTCTCTAGTGGCACATGGTCATCCATCCCAAACTGAAGTATCCAGTTATGAAGTATGCAGCATGCAAGGACCAATTTGACTTGGGTCTTGTATGGATGGAAAGGCTTGTTATAGAGTATTCTGAAGCGGTTTTTGAGTGCGCCAAATGCCCGCTCGATCGTGACCCTTAAAGAGGAGTGTCTTAGATTAAACAACTCTCTCGAATCACGAGGGTAGTTTCTTCTATCATACTCCTTCAAATGGTATCGACACCCACGATATGGCGGAAGGAACCCCGGTCTAGCAGCATATCCAGCATCAACGAGATAGTATTTTCCTAAGAGATAAAAGCTATGAGTGTAATAATCATATGAGATAAATGAGAATCCTTATTAATCGTTAGTTTTAACACTTCTATTACCTGAGGGGACACTAAGACCATCATCCCTCTCCAAGGCATCTGCAAGTATGAGGGCATCATGTGCAGATCCTTCCCACCCAGCAAGTACGTATGTAAATCCAAGATCAAAGTCCACTGCAGCCATTACATTCTGGGTGGTCTCTTTCTTCCTACCCCTAAAGGCAGCAGATATTGTTGATGGAACTCGAGCAAGCACATGAGTTCCATCTATTGCACCAATGCAATCCTAATGACCAGTGAGAAATATTAGGACATGATTGTTGAAAGAACATATTTTGTAGTCAAAATGCTGCAAACAAATTTTTACCTTAAAATAAGGGTTGAATCTTCGATTGGATGTAATTTTTGAATGAGGCTCAGATGAGGGTGGTTTTATCATCTCATTTCGCAGCTCACCAATAGAGAATAATACCTCAGCGAAGTATCTACTGATAGTTTCAATTGACCTCCTAAAAGTGGGTTGCAAAGCTCTAAATCTGTGGTTGTGGCCTACAACAAGAAGAAACATGGCAACTTGTTCTTCCACTGAGCTATGTATACTGTCCCGCAACAACGCTCTTTCTCGTAACAAGTTACACAGCTGAAAAAATGGGGCTCTCTTCATTCTGAGCTGATTTAAGCAATTTGTATCATCTGTATGATAGATGAAACTAAGATTGGATTGTCTAGCTATGTCCCTTTCGGACAATGGGCCATAGGAGATCCTAGGGGTACGTCGCATGGCTCTTCTTGTAATAAACAGAATGTAAGCATTCATTACAGCAACTAATCCAGCTGCTTTAGCAATCAGGGACCGCCGAATGCGTTGCATTTCTTCCATCTATGCAAATAACATATATAATGCATAGTCAATTCAGAAATAAAAGGATGGTCTTGTCGCTACTAAGTACTGCAAATCAATTTCGTATGCATGTATGCCACGGCCGCCACATCCAAGGGATGCTACCTCCAGTGGCATACCATCATCGACCAT

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CDS seq

ATGGTCGATGATGGCCACAACCACAGATTTAGAGCTTTGCAACCCACTTTTAGGAGGTCAATTGAAACTATCAGTAGATACTTCGCTGAGGTATTATTCTCTATTGGTGAGCTGCGAAATGAGATGATAAAACCACCCTCATCTGAGCCTCATTCAAAAATTACATCCAATCGAAGATTCAACCCTTATTTTAAGGATTGCATTGGTGCAATAGATGGAACTCATGTGCTTGCTCGAGTTCCATCAACAATATCTGCTGCCTTTAGGGGTAGGAAGAAAGAGACCACCCAGAATGTAATGGCTGCAGTGGACTTTGATCTTGGATTTACATACGTACTTGCTGGGTGGGAAGGATCTGCACATGATGCCCTCATACTTGCAGATGCCTTGGAGAGGGATGATGGTCTTAGTGTCCCCTCAGGAAAATACTATCTCGTTGATGCTGGATATGCTGCTAGACCGGGGTTCCTTCCGCCATATCGTGGGTGTCGATACCATTTGAAGGAGTATGATAGAAGAAACTACCCTCGTGATTCGAGAGAGTTGTTTAATCTAAGACACTCCTCTTTAAGGGTCACGATCGAGCGGGCATTTGGCGCACTCAAAAACCGCTTCAGAATACTCTATAACAAGCCTTTCCATCCATACAAGACCCAAGTCAAATTGGTCCTTGCATGCTGCATACTTCATAACTGGATACTTCAGTTTGGGATGGATGACCATGTGCCACTAGAGAGTGATTGGAACTCAGATAGTGATGATGAGGAGCCCGATGACTTAGATGAAGACAATAGGGGAATGGCGCAAATTAGGGATGATTTGGCTGGTGCTATGTGGAACAATAGAGGGATGGCTGAGGCTGGTGGCGGGAATGGTGGCCATGGTGGCCATGGTGGACACCATGGAGCCTTGCATTGGACAACCAACATGTCTAGCTTAATGCTAAGGCGCATGGTTGAGCTTATAGCAACAGGTGTTAGGACTGACAAGGGTTTCAAGGAAGCTCACCTTAACCAAGTTGCTAGATCTTTGTCTGATCACTATGGAATTGAAATTAGTGGAACCCAAGTGTATAACCATCTTCGCAAATGGCGTCAAAGGTGGGTGCGTATCACTAGGCTCAAAGACCTTAGTGGGGCTCTTTGGGATGATCAGACCTCAACGATTATCCTAGAAGAGGAGCACTACATGGGACATGTCAAGGAACACCCTAAGGATGCTGAGTTTCTCAATGTGCCTTTAGAGAACTATACACAAATGGCAATAATTTTTTCAAATAGGCAAGCCACTGGGAGATTTGCTATGGGGTCAAATGAAGCACTTGGAAACCCTGCTGGTGAGGCTGACAGTGGTCTGGGACCTCTTGATGGCACTATTGGGGATGGTATTGCTGCTGGACCAAGTGGTGTGGGTGCTGAAGGTCCTGGAATTGCTGCTCGAGCAAGTGGTGTTGGGCCTACTGGTGAGGATTCTACCTCAGATAAGAAGAGGAAGAGAGCATCTGCTTTGAATGAAGGTGAAGTTGCTCTCATCAGCAATATGACAGATTCAGTGAACAACATGGCTTCAGCAATAGGCGCTACTGCACATACTGAGGTTCACCCTGATTTGTGCAACACAGTGATGGATCTTCCAGGTTTCAGTGAGGATCAGCTGGACCTTGTTCTAGCTTATCTAACTAAGGAGAAGGCTGAAAGCCTTGTATACATTCAGAAGAATGAGGCTCGTCGTGCTCGTTGGGTCAGGAAGTTCCTGAATGAGCATCACCCTGAGAGCATCTAA

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Protein seq

MVDDGHNHRFRALQPTFRRSIETISRYFAEVLFSIGELRNEMIKPPSSEPHSKITSNRRFNPYFKDCIGAIDGTHVLARVPSTISAAFRGRKKETTQNVMAAVDFDLGFTYVLAGWEGSAHDALILADALERDDGLSVPSGKYYLVDAGYAARPGFLPPYRGCRYHLKEYDRRNYPRDSRELFNLRHSSLRVTIERAFGALKNRFRILYNKPFHPYKTQVKLVLACCILHNWILQFGMDDHVPLESDWNSDSDDEEPDDLDEDNRGMAQIRDDLAGAMWNNRGMAEAGGGNGGHGGHGGHHGALHWTTNMSSLMLRRMVELIATGVRTDKGFKEAHLNQVARSLSDHYGIEISGTQVYNHLRKWRQRWVRITRLKDLSGALWDDQTSTIILEEEHYMGHVKEHPKDAEFLNVPLENYTQMAIIFSNRQATGRFAMGSNEALGNPAGEADSGLGPLDGTIGDGIAAGPSGVGAEGPGIAARASGVGPTGEDSTSDKKRKRASALNEGEVALISNMTDSVNNMASAIGATAHTEVHPDLCNTVMDLPGFSEDQLDLVLAYLTKEKAESLVYIQKNEARRARWVRKFLNEHHPESI

Function Putative nuclease HARBI1 [UniProtKB/Swiss-Prot:Q17QR8]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_01G0034200 OsZS97_01T0034200.1 Chr01 1960796 1963513 - makerRMon
CDS seq

ATGGTCGATGATGGCCACAACCACAGATTTAGAGCTTTGCAACCCACTTTTAGGAGGTCAATTGAAACTATCAGTAGATACTTCGCTGAGGTATTATTCTCTATTGGTGAGCTGCGAAATGAGATGATAAAACCACCCTCATCTGAGCCTCATTCAAAAATTACATCCAATCGAAGATTCAACCCTTATTTTAAGGATTGCATTGGTGCAATAGATGGAACTCATGTGCTTGCTCGAGTTCCATCAACAATATCTGCTGCCTTTAGGGGTAGGAAGAAAGAGACCACCCAGAATGTAATGGCTGCAGTGGACTTTGATCTTGGATTTACATACGTACTTGCTGGGTGGGAAGGATCTGCACATGATGCCCTCATACTTGCAGATGCCTTGGAGAGGGATGATGGTCTTAGTGTCCCCTCAGGAAAATACTATCTCGTTGATGCTGGATATGCTGCTAGACCGGGGTTCCTTCCGCCATATCGTGGGTGTCGATACCATTTGAAGGAGTATGATAGAAGAAACTACCCTCGTGATTCGAGAGAGTTGTTTAATCTAAGACACTCCTCTTTAAGGGTCACGATCGAGCGGGCATTTGGCGCACTCAAAAACCGCTTCAGAATACTCTATAACAAGCCTTTCCATCCATACAAGACCCAAGTCAAATTGGTCCTTGCATGCTGCATACTTCATAACTGGATACTTCAGTTTGGGATGGATGACCATGTGCCACTAGAGAGTGATTGGAACTCAGATAGTGATGATGAGGAGCCCGATGACTTAGATGAAGACAATAGGGGAATGGCGCAAATTAGGGATGATTTGGCTGGTGCTATGTGGAACAATAGAGGGATGGCTGAGGCTGGTGGCGGGAATGGTGGCCATGGTGGCCATGGTGGACACCATGGAGCCTTGCATTGGACAACCAACATGTCTAGCTTAATGCTAAGGCGCATGGTTGAGCTTATAGCAACAGGTGTTAGGACTGACAAGGGTTTCAAGGAAGCTCACCTTAACCAAGTTGCTAGATCTTTGTCTGATCACTATGGAATTGAAATTAGTGGAACCCAAGTGTATAACCATCTTCGCAAATGGCGTCAAAGGTGGGTGCGTATCACTAGGCTCAAAGACCTTAGTGGGGCTCTTTGGGATGATCAGACCTCAACGATTATCCTAGAAGAGGAGCACTACATGGGACATGTCAAGGAACACCCTAAGGATGCTGAGTTTCTCAATGTGCCTTTAGAGAACTATACACAAATGGCAATAATTTTTTCAAATAGGCAAGCCACTGGGAGATTTGCTATGGGGTCAAATGAAGCACTTGGAAACCCTGCTGGTGAGGCTGACAGTGGTCTGGGACCTCTTGATGGCACTATTGGGGATGGTATTGCTGCTGGACCAAGTGGTGTGGGTGCTGAAGGTCCTGGAATTGCTGCTCGAGCAAGTGGTGTTGGGCCTACTGGTGAGGATTCTACCTCAGATAAGAAGAGGAAGAGAGCATCTGCTTTGAATGAAGGTGAAGTTGCTCTCATCAGCAATATGACAGATTCAGTGAACAACATGGCTTCAGCAATAGGCGCTACTGCACATACTGAGGTTCACCCTGATTTGTGCAACACAGTGATGGATCTTCCAGGTTTCAGTGAGGATCAGCTGGACCTTGTTCTAGCTTATCTAACTAAGGAGAAGGCTGAAAGCCTTGTATACATTCAGAAGAATGAGGCTCGTCGTGCTCGTTGGGTCAGGAAGTTCCTGAATGAGCATCACCCTGAGAGCATCTAA

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Protein seq

MVDDGHNHRFRALQPTFRRSIETISRYFAEVLFSIGELRNEMIKPPSSEPHSKITSNRRFNPYFKDCIGAIDGTHVLARVPSTISAAFRGRKKETTQNVMAAVDFDLGFTYVLAGWEGSAHDALILADALERDDGLSVPSGKYYLVDAGYAARPGFLPPYRGCRYHLKEYDRRNYPRDSRELFNLRHSSLRVTIERAFGALKNRFRILYNKPFHPYKTQVKLVLACCILHNWILQFGMDDHVPLESDWNSDSDDEEPDDLDEDNRGMAQIRDDLAGAMWNNRGMAEAGGGNGGHGGHGGHHGALHWTTNMSSLMLRRMVELIATGVRTDKGFKEAHLNQVARSLSDHYGIEISGTQVYNHLRKWRQRWVRITRLKDLSGALWDDQTSTIILEEEHYMGHVKEHPKDAEFLNVPLENYTQMAIIFSNRQATGRFAMGSNEALGNPAGEADSGLGPLDGTIGDGIAAGPSGVGAEGPGIAARASGVGPTGEDSTSDKKRKRASALNEGEVALISNMTDSVNNMASAIGATAHTEVHPDLCNTVMDLPGFSEDQLDLVLAYLTKEKAESLVYIQKNEARRARWVRKFLNEHHPESI

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0063415 0.0257865 0.027925

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0186900 SBH 2.032762 2.997863 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g19370 SBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os01g0186900 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0006560 SBH 0.0 0.0 2.404276
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0006210 SBH 0.069970 0.0 0.512102
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0006520 SBH 0.0 0.566940 1.080664
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0006040 SBH 0.039012 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0006230 SBH 0.0 1.878553 1.232357
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0034300 RBH 0 0.011879 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0060700 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0005980 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0006190 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0006190 SBH 0.343280 0.0 0.684844
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0006150 SBH 0.064658 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G006190 SBH 0.000000 0.486823 0.776887
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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