Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsZS97_01G0025000 | OGI:01005190 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:1411485-1414878 | ||||||||
Gene Symbol | RLCK19, OsRLCK19, - | ||||||||||
DNA seq | GGTCGCGCGCGTCGTTGAAACGTCACACCTAGCTAACTGCACTGCACTTCTGCGTGTCTGCGTCGTGTACTCGTGTGCACCGTGTGCTTTGGTGTTTTAATTTCTCTCTATTTTGCTCTGCTGCTGCCATGCCGTGGTCGTGCGGCTGGTGCGGGAGGTGGAGGAGGAGCAGCGGCGGAAGAGGAGGAGGCGCTGATCGTGAGGCCAACGGCGGTGGCGGCGGCGGCGGCGGGGCGGCGTCGGGGAGGGAGGAGGAGCAGTGGAGCCTCTTCATCGAGCTGCCCGTGCTGGAGGCCGCCACCCGTGGCTTCTCCGACGACAACCTCCTCGGCCGCGGCGGATTCGGCCCCGTCTACAAGGCTTGTTTCTTACTGCCATCTCATCGTCCCCTTTCGCCATGGCTTTGCTTTGCTGCTAGGCTGTTGCCCTGTTTTGCTTGTGGAATTCACCTAACATTAACAAAGACTGGTTTTTTATTGGTTGGTCAACAAAACCATTCCTTGCTTTCCATTCTGATTTTGTCCTTTTCACATACCAAAACGACACAAATGATTGATCTAACCCTGTCTATGTATGGGTAATGGGTGTACTATCTTTTCCATGGACAAATATCTTTTCTACTGTTTGCTGGCTCTCTCTTTTTTTTTTCACCACTAATAACTGATTATACCTGCTCTGCTACTTTCAGACATCATTTCGTCAAATTAATATGCGATATTAATTTTTTTCCTCTCTTTTGAGATTCTAATCTCAACATTGCACGAACCAAAGCATCATTTTTTACTCCTGCAAAGCAAAGCAGTAGTAGTAAATAATAAACGTACCATTACTTGTCAGGAATTTTACATCTTGGGAAGAATGAACTACTAACTGACAAAAAATCGGTTGATCTTGTTACCATCTCTCTTCAGGGGGTGCTCGAGAATGGGCACGAGATCGCCGTCAAGAAGCTGTCGCTGGAGTCACGGCAAGGTGTTAGAGAGTTCTTGAACGAGGTGAGGCTGCTGCTCAAGGTGCAGCACAGGAACCTGGTCTCCCTGCTCGGATGCTGCGCTTCCTCCGGTCACAAGATGCTTGTCTACCCTTACTTCCCAAATGGCAGCCTCGACCACTTCCTCTTCGGTGACACCTCTCTCTCATCTGCATACTACTGTATTATGTTGCAAAATGTCCTAATTATTAATTGCCATCAGATTGCTTCTGAATTACGGGTAGAATTTGTGAGCTAAATCTGACAGTTTGGTCATTTTTTTAGTAGTATAACGAATCACTGTTATCTGTTTATCATTAATCAAAACACAAAGGTTCTAACCTCGGAAGCTAGGCACTCTGTTGGAGAGTTTGTGGTGCACAAATCATAATAGCCAAAACTCTATGGTAGTTCTGAATAAAATTCAGGGAAAGTGCTTGTAGAAACAGTCATTTCTGGTAGAAAAACAAGTCCCTACTGGAGTTCCATTGTTTGTGGCCTAGTGGTTTCAACTTTCAAGGAGACCAAAACGATGAGTTAGCCGTGGCAAAGCATATATTCGCACAGACACAGTCACACAGAGTTGTTCAGTCAATTAAGCAGAACACAGAATCTGCAAGAAGTCTTTTTGTCAGTCAATGTAAGGAAAAATCTGCCTTGACGTTCTCATTGACCTTTACTGTGTCAAAAGCAATACTTCGATTTGCTTAATCTCAAAGGCTCAACATATCACATCAAATCGGGTATGGCTGTATGCCATTATGCCGCCCAATGTCTTTGGATTGACCATTTCTCGAATAGGATTTCTTGTCATTTGGAGTAATCTGAACACCGCCCCCCCCCCCCCCCCCCCACACACACACAAACTTCTGTGTGGACAAACAAATGACAGAAAGTCCAATTAGCTACTCCGTACCATAGTTTGAAATGCTCCATGATTTTGTTAAAAAAAACATAAAGCATAACTAATTATGTTCTTTACAATTTCCAGTTTAAACATAAAGATAGGCATGTACCTATACTTAATTCCATCTGCATATATAATCCATACAAAACCAGATCAGTATTCAGTACTACATCCATTCCAAAATTAATATAATGACTTTTAGCACTAGTCCAGATTTATGACTAAAAGTTACTATATTTTAGGACAGAGGTAGTACAACATAAAAAAAACAGAAAATGCTCTGCAACCTGCTGTATGTATGATACCTGTTTATGTACCTCTAGACAGAAAGAAGAGCGTGCAGCTGGATTGGCCCAAACGCTACCAAATAATCGTCGGCCTAGCGAGAGGCCTCCTCTACCTCCACGAGGAATCCCCCGTCAAGATCATCCACCGAGACATCAAGGCAAGCAACGTGCTCCTCGACGAACAGCTGAACCCAAAGATTTCAGATTTCGGCATGGCAAGGCTCTTCCTCGAGGACGCCACGCACGTCAACACCTTCCGGATTTCCGGCACATAGTGAGTAATTACACCAGAACCCATCGTTGTTATTCACTTGATCCGTCCACAAAATCTCTGTAATTGCGTGTGAGTACAGTAAGTGATACGTCGCAGTGGTTACATGGCTCCAGAGTACGCGATGAACGGCTACCTGTCTACGAAAACCGACGTTTTCAGCTTCGGGATGCTGGTGCTGGAGATCGTCAGCGGGAGGAAGAACATCGATAAACATCTCGACGCCGAAAAAACCGACCTCCTGAATTACGTAAGTACTCTGAAATAACAACACTGGATTCTGAAAATTTATCTTCCAGGAGCAGCATTGTGAGTTGTGACTGAATCTTTTTTTTTCTGGAAATTATTCAGACATGGAAGCTGTCAGAGGAAGGGAGGCAGATGGAGATCGTGGACCCGGCGATGGCGGAGTGGGACGCCGACGAGGCGCGGCTGTGCGTGCAGCTCGGGCTGCTGTGCTGCCAGGCCGTGGTGTCGGACCGGCCGGACATGTACACCGTCCACCTCATGCTGTCCAGCGACTCCTTCACGCTGCCCAAGCCCGGCAAGCCGGCGATCCACGGCCGGGTCGGCCGGTGGATGAGCACCACCACCACGGCGTCCTCCGCCGCCTCCACCGCCAACACGGCCACCACGCTCGGCACCGACACGATGACGACGAGGGCGTCGGCGTCGGCGGCGGCGCTGGGCGGCATTGCCGAGGACGACTCCAGGAACTCCATCTCGATCTCCTTCACCACTGAAGGCCGGTAAAACAAGACAGGAATTCAACCATGGACAGTGCAAGTAGTAGGTTAGATAGATAGTGTCGGAATTTTTTATCCAAATAATTGTGTTTTGATTGATATGAACAGGAGTACATTTGCTGTGAATTAATTGGCAGTGCATATGCACAGAATTTTGCATTTGGGGCAATCCATTCTGACTCATTTGAGCCGTAAATAATCTGCGGGCCGTGT
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CDS seq | ATGCCGTGGTCGTGCGGCTGGTGCGGGAGGTGGAGGAGGAGCAGCGGCGGAAGAGGAGGAGGCGCTGATCGTGAGGCCAACGGCGGTGGCGGCGGCGGCGGCGGGGCGGCGTCGGGGAGGGAGGAGGAGCAGTGGAGCCTCTTCATCGAGCTGCCCGTGCTGGAGGCCGCCACCCGTGGCTTCTCCGACGACAACCTCCTCGGCCGCGGCGGATTCGGCCCCGTCTACAAGGGGGTGCTCGAGAATGGGCACGAGATCGCCGTCAAGAAGCTGTCGCTGGAGTCACGGCAAGGTGTTAGAGAGTTCTTGAACGAGGTGAGGCTGCTGCTCAAGGTGCAGCACAGGAACCTGGTCTCCCTGCTCGGATGCTGCGCTTCCTCCGGTCACAAGATGCTTGTCTACCCTTACTTCCCAAATGGCAGCCTCGACCACTTCCTCTTCGACAGAAAGAAGAGCGTGCAGCTGGATTGGCCCAAACGCTACCAAATAATCGTCGGCCTAGCGAGAGGCCTCCTCTACCTCCACGAGGAATCCCCCGTCAAGATCATCCACCGAGACATCAAGGCAAGCAACGTGCTCCTCGACGAACAGCTGAACCCAAAGATTTCAGATTTCGGCATGGCAAGGCTCTTCCTCGAGGACGCCACGCACGTCAACACCTTCCGGATTTCCGGCACATATGGTTACATGGCTCCAGAGTACGCGATGAACGGCTACCTGTCTACGAAAACCGACGTTTTCAGCTTCGGGATGCTGGTGCTGGAGATCGTCAGCGGGAGGAAGAACATCGATAAACATCTCGACGCCGAAAAAACCGACCTCCTGAATTACACATGGAAGCTGTCAGAGGAAGGGAGGCAGATGGAGATCGTGGACCCGGCGATGGCGGAGTGGGACGCCGACGAGGCGCGGCTGTGCGTGCAGCTCGGGCTGCTGTGCTGCCAGGCCGTGGTGTCGGACCGGCCGGACATGTACACCGTCCACCTCATGCTGTCCAGCGACTCCTTCACGCTGCCCAAGCCCGGCAAGCCGGCGATCCACGGCCGGGTCGGCCGGTGGATGAGCACCACCACCACGGCGTCCTCCGCCGCCTCCACCGCCAACACGGCCACCACGCTCGGCACCGACACGATGACGACGAGGGCGTCGGCGTCGGCGGCGGCGCTGGGCGGCATTGCCGAGGACGACTCCAGGAACTCCATCTCGATCTCCTTCACCACTGAAGGCCGGTAA
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Protein seq | MPWSCGWCGRWRRSSGGRGGGADREANGGGGGGGGAASGREEEQWSLFIELPVLEAATRGFSDDNLLGRGGFGPVYKGVLENGHEIAVKKLSLESRQGVREFLNEVRLLLKVQHRNLVSLLGCCASSGHKMLVYPYFPNGSLDHFLFDRKKSVQLDWPKRYQIIVGLARGLLYLHEESPVKIIHRDIKASNVLLDEQLNPKISDFGMARLFLEDATHVNTFRISGTYGYMAPEYAMNGYLSTKTDVFSFGMLVLEIVSGRKNIDKHLDAEKTDLLNYTWKLSEEGRQMEIVDPAMAEWDADEARLCVQLGLLCCQAVVSDRPDMYTVHLMLSSDSFTLPKPGKPAIHGRVGRWMSTTTTASSAASTANTATTLGTDTMTTRASASAAALGGIAEDDSRNSISISFTTEGR |
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Function | Cysteine-rich receptor-like protein kinase 41 [UniProtKB/Swiss-Prot:O23081] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsZS97_01G0025000 | OsZS97_01T0025000-mRNA-1 | Chr01 | 1411485 | 1414878 | + | makerRMon | ||
CDS seq | ATGCCGTGGTCGTGCGGCTGGTGCGGGAGGTGGAGGAGGAGCAGCGGCGGAAGAGGAGGAGGCGCTGATCGTGAGGCCAACGGCGGTGGCGGCGGCGGCGGCGGGGCGGCGTCGGGGAGGGAGGAGGAGCAGTGGAGCCTCTTCATCGAGCTGCCCGTGCTGGAGGCCGCCACCCGTGGCTTCTCCGACGACAACCTCCTCGGCCGCGGCGGATTCGGCCCCGTCTACAAGGGGGTGCTCGAGAATGGGCACGAGATCGCCGTCAAGAAGCTGTCGCTGGAGTCACGGCAAGGTGTTAGAGAGTTCTTGAACGAGGTGAGGCTGCTGCTCAAGGTGCAGCACAGGAACCTGGTCTCCCTGCTCGGATGCTGCGCTTCCTCCGGTCACAAGATGCTTGTCTACCCTTACTTCCCAAATGGCAGCCTCGACCACTTCCTCTTCGACAGAAAGAAGAGCGTGCAGCTGGATTGGCCCAAACGCTACCAAATAATCGTCGGCCTAGCGAGAGGCCTCCTCTACCTCCACGAGGAATCCCCCGTCAAGATCATCCACCGAGACATCAAGGCAAGCAACGTGCTCCTCGACGAACAGCTGAACCCAAAGATTTCAGATTTCGGCATGGCAAGGCTCTTCCTCGAGGACGCCACGCACGTCAACACCTTCCGGATTTCCGGCACATATGGTTACATGGCTCCAGAGTACGCGATGAACGGCTACCTGTCTACGAAAACCGACGTTTTCAGCTTCGGGATGCTGGTGCTGGAGATCGTCAGCGGGAGGAAGAACATCGATAAACATCTCGACGCCGAAAAAACCGACCTCCTGAATTACACATGGAAGCTGTCAGAGGAAGGGAGGCAGATGGAGATCGTGGACCCGGCGATGGCGGAGTGGGACGCCGACGAGGCGCGGCTGTGCGTGCAGCTCGGGCTGCTGTGCTGCCAGGCCGTGGTGTCGGACCGGCCGGACATGTACACCGTCCACCTCATGCTGTCCAGCGACTCCTTCACGCTGCCCAAGCCCGGCAAGCCGGCGATCCACGGCCGGGTCGGCCGGTGGATGAGCACCACCACCACGGCGTCCTCCGCCGCCTCCACCGCCAACACGGCCACCACGCTCGGCACCGACACGATGACGACGAGGGCGTCGGCGTCGGCGGCGGCGCTGGGCGGCATTGCCGAGGACGACTCCAGGAACTCCATCTCGATCTCCTTCACCACTGAAGGCCGGTAA
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Protein seq | MPWSCGWCGRWRRSSGGRGGGADREANGGGGGGGGAASGREEEQWSLFIELPVLEAATRGFSDDNLLGRGGFGPVYKGVLENGHEIAVKKLSLESRQGVREFLNEVRLLLKVQHRNLVSLLGCCASSGHKMLVYPYFPNGSLDHFLFDRKKSVQLDWPKRYQIIVGLARGLLYLHEESPVKIIHRDIKASNVLLDEQLNPKISDFGMARLFLEDATHVNTFRISGTYGYMAPEYAMNGYLSTKTDVFSFGMLVLEIVSGRKNIDKHLDAEKTDLLNYTWKLSEEGRQMEIVDPAMAEWDADEARLCVQLGLLCCQAVVSDRPDMYTVHLMLSSDSFTLPKPGKPAIHGRVGRWMSTTTTASSAASTANTATTLGTDTMTTRASASAAALGGIAEDDSRNSISISFTTEGR
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 2.1046185 | 14.408624 | 0.470085 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0227200 | SBH | 3.608265 | 3.086138 | 6.908032 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g03690 | RBH | 0.300203 | 0.494376 | 0.209436 |
Nipponbare | IRGSP 1.0 | RAP-db | Os01g0227200 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0002030 | RBH | 0.149401 | 0.000000 | 1.029012 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0001910 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0002040 | RBH | 0.561902 | 1.008352 | 1.303140 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0001930 | RBH | 0.000000 | 0.045833 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0002000 | RBH | 2.235355 | 4.015699 | 5.105312 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0025300 | RBH | 2.4353845 | 10.1804115 | 1.4657045 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0001950 | RBH | 0.000000 | 0.0 | 0.000000 |
Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0001840 | RBH | 0.159857 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0001990 | RBH | 0.150496 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0002040 | RBH | 0.000000 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0002010 | RBH | 0.0 | 0.0 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0001900 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G002120 | RBH | 0.086938 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0001990 | RBH | 0.000000 | 6.116613 | 3.514502 |