Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_12g0013200 | OGI:12049750 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr12:17425802-17440631 | ||||||||
| Gene Symbol | OsM13, M13, OsM13a, OsUBP5-4, UBP5-4, OsUBP12, UBP12 | ||||||||||
| DNA seq | gctttccttccttgcccggttaccccccTccaaattccccgagatctcttccttgctgcacccggaaatccccgaatcacccccctcgtcaccaccacgaccAatttccccctCcccccttcccttccctctccgcatcagcaacccacccccacccctcgccgccgccgccgccgccgccgccgcagtcgcggctcccgctccccaaccgaggaatccgctgccaccgccgccgctgcgggcgcccaagctcgacgtcccgctgcctacgacgtcgcccacggctccatgactatgatgactcctCCccccatcgaggtacgcgcttctcctctcctccccctccactctcctctcctctccccccccccccccacgcactcgcgagcgcgagaggcccgatctcccgcggcagtgttgggttggctccgaggaatccgcgtgccgcgacgggtgttgcgcgatcggggtggggtgggggcgggcgactttggggctagggtttacgcgcggtggccggatctgagtgagtgacatgacatccccctctctcactacgcgctctctctctcgcGCAgcagcagcaggaggacgaggagatgctcgtgccgcaccaggagctccccgccgccgccgccgctgtcgtcgccgacgccgtgcagccgatggaaggtgagactgaccgcgagttcacacagtcctcgcacgcgtgtgctgtgttttattagggtgggttgtgtgggtttaggcgtttttgagatttttatttgctgatctagtacgtgtgtggttgttgttgttgttgttgttgtttgtgctgctagttgtggcgcagacagagcctgccaacgcggcagagagccagccgccggaggacccgcagacgtcgcggttcacgtggacgatcgagaacttcaccaggatcaacgggaagaagcactactcggagccgtttgttgttggaggattcaaatggtaatatatctcgcggtcgcggttcctagtggaaatgcggttaccttgggacttgcttgaagcgcggagggttttgatatagatgttctgcctttgcgtgtaggcgtgtgctgattttccctaaggggaacaatgtggaccatttctctatgtatttggatgtcgcggactcggtgaatctcccttatggatggaaccggtatgctcagttcagcttggctgttgtgaaccagatccatccgaagtataccattcggaaaggtattattaccttctttcatttaatgttgtattttccatgtcgtaagaatgctactagtcaatgtatcatggatcgaggtggaacatgcggtgttgtaccgatcatttttaaagaatgggacccacaagtcagatgtaactttcactgaggtgattgtcagcaactgtcaatgttctatttcaatggcctgtgtgtatgtttttaagatgctatgtatttactgctggatgtagtttgttggcagtggtaattaatgatgacgtggcacataactagtttctaaacataacaagtcaaaagttgacctagatgcatgagatgtaccataaggcgagatgcggaagtctactagcaaagactttttgtttatcatttcacaatgacaactaagctacaaataaccataaggcatccccttttattttattcctgagataatttaattcttttacatcaggatgcctatattgttaacacatgtaacatgtgcgagtatcatgacttccttttggagtttagttgtgcttttaatggacagtttttacttcctaggtaaatatttttttgtttctttttattatttacttatttgaatctgatgtttgtcatctgtctgtctctgttggtcttgcacttctggcaattaatggacctagcatctcaactatcgagtgtgcttgttagttcctgcagttgggtgttagtctatggttcaacgttcatggagtttataattattagtgtcaactgttagttggactgtttattgctatgttaatagtgttgctggttttgttgtttttctataccgaacaattcttagtaggattttggctgagtgagactttgttatgatgtttacacatcataattttatatggatttgaatattttcatatgtttcatacattttgttccattatgagtaaataacacctgatagttttgcctttaattttctgttcagttactattgtttcttcagtttgagctgttaagtcttaatcatgtactatttaggagtgttgagaagtttttgtatgacactagaaagttactttagctgaaatgccaatgcaatatgtgcactccttgaacaccactacttctcaaaaacttaacttatttgccatgtctgtcaatgctagactgttaaacccaaaattcctatcagatatttacccatcttactctatatctcctcccttcatcctatattggtgcattactatcttatctgcctttggctgttgagcaattccagcatcttcaccatttcctcctccagttggctagaacactatgagggacatgaacttgatagcctgggacgccattcccacaaatcacccctgttccttctgtgtcaacttcttgtttctatataagctcatccttttaattcccttcatcacaatggcatgtgagttccaatttccatgttccaacttctgtttcctctctccttttccattacattagttattataggcctgtgcgttgcaactgtattttttttattcagtatagtggaaggatttggatagggtgggctgtttggttttttataccgtagttttttttttttgaggaatcagtctttaagggtgaacggtttttatgggagggaagaggttttaggaggaagtgggggagggggaaggaggacgactccCTCttttaagtagtAGaaatgtacatgaggggggaaaatggtctcatgaaagccccttcgtgcggttgcaccctaacttacaaaaactgatgagtattggccaacaggtttagttttttaagaacagtagtggaatagaagggagcattcattctgcaagatcattgcagagatttgagaacttcctactgatgacatgcttcctcaatgataaaatggatattgagaacttctaattttttctatacgtggaaataatgaaagccttttgtattagcagcgattgacttgcacatgttgcttacatgtttggcagatactcaacatcaatttaatgcacgtgagagtgactggggtttcacatcttttatgcctttgagtgatctgtatgacccaagtaggggctaccttgttaatgacaccgttgttgtggaagctgaggttgctgttcgcagaatggttgattactggacttatgactcgAaaaaggaaacaggatatgttggtctaaagaatcaaggagctacctgttatatgaactctcttctacaaacactgtaccatataccatatttcaggaaggtctgagatcattactttttcctagtctacatgatttgttaagtacctgaacttaagactaattgaaatttcatcttaggctgtatatcatatgccaactactgagaatgacatgccatctgggagtattcctttagccctgcagagccttttttacaagctccaatacagcgacaatagcgtagctacaaaggagttgaccaaatcttttggatgggacacttatgattctttcatgcagcatgatgttcaagagcttaacagagttctttgtgagaaacttgaagacaaaatgaaggtgaatattataacaaacattttattatatgtctacgatttgttattaactttgcgttgacccaggaaactgttgtggaaggaacaattgaacaattatttgaaggccaccacataaactatatcgagtgcattaatgttgattataaatctaacagaaaagaatccttttatggtaagctttttcacattgaacattcagtatcatttttaatttagtgcttactcatgttataacattgcagatctacagcttgatgtcaaaggttgtcgtgatgtttatgcatcatttgataaatatgtcgaagtggagcgtctagagggtgataacaaatatcatgcagagcagtatggcttacaggtactgacaaatcctgcactccgaagttgaatattttgatgtagtgaacttcttagcaggtttttttgggagtacagtatacatgtggagtaaatttaggttattacctctttttttttgtttagtaaaataataactctgtaatgttggtgtgtacttgcatacagtttattcattgaggagcgatttcctttaatgtagacataaaattaaaagatgttaatcatctgattttccaagttaatgaatggcaatatagcatacatgccatgattatattttcttaccttgatactgcattggcacttgatattctgtaatcttttcaggatgcaaagaagggagtactcttccttgatttccctcctgttttgcaacttcaactgaagcgttttgaatatgattacatgcgagatacaatggtcaaggttggaactgtggcacccttacctttaaattctgaagtgtctatatttcctttacatctgtctgtaattatattgttgtcttgtttcaagtagattcctcaaaatactgttattttcttccgcaatgataaacatattgccatttcaggtttagcattgacctagttattgtttttagagtgaagtacatgggcggtcccgaaacttgtgccagtgtgtcatctaggtccccgaactcctaaaatgcatttttaggtccctgaacttgtcatgtgtgtcatataggtccaaatgggttctaacctgctccatagcgctgatgtggcaatgccacggtgacacctacatgtcagtggaatccacatgtcaagcatatataaaaaataaaattgaaaaccatattttctcctcttagatagacagaaaaaaagataaaaattctaaggtagagaggagaaaatatgtttttctaattatatttttttctatgttactgacacgtgggtccgactaatacataggctctaccgtggcatgccacatcagcgcatggaagaggttggagcttgtttggacctatatgacacccaaaacaagttcgaggacccgaaaatgcattttgagagtttagggacctaaatgacacaccagcacaagtttagggaccgcttgcgcacttcactcttgtttttatgaaggcatcaaacatgctttcataggtttaatcatttgacgctgtgttttctgaacttctcccataacatataagctggcagcgatttttttcctactggcattactacttacaaactaactgaaacaacattgaagaattagcaaaaaaaactcaaaaaattgaatgggggttatatcggactgtcatctgatgataagctcttgacaacaatgatcacatccactactagctccttgaaattatcaactgtcattttcgcagtggtgcgcatgtttcacatttttaggtactaaccagtttggcactaataagatcaaatctttattttgcaaccgaatcaaaacaaacttcatgttctatcttggctacaactaaaactggttttctgggtgggtttttcacaaatcaggcagttctcaccttttgggagaaagcatgctagggtggtaagggataaacacttgttaccacgttttggctttgctttagaactatactcatcagtaagcagatagttatgacggttttttttaggtcagtaccatattttcttcacctcgttacttttttgctaggagcagtctatgtttgaacacttttttttgcactttgaagcaattaagtaattaacgtgatatctatcctcttatttctcatataataaattatggaaagttcagcaacaaatcgttgattgattaacgtccaattctgcagattaatgaccggtatgagttcccacttcaacttgatcttgacagagatgatgggaaatatcttgctcctgatgcagatagaagcattagaaacctttacactcttcacaggtgtgattttatcttttttttttagtaaattttgtgattttatcctttttttttgtaaattttatcagttatgtgaatacttttatattagtcacagcagtcatgaacaaaaaaagtcatatacgaggaattcaaaccaatatagcacttgcatatagcgctttggtttctgaaataattgagccaccatgttttttgctgatttgatatttattattgcatatatcatgtattaggcaagatcttgaaaggagactgtttgataatttgtatttgtgacttgtgagcactgccatatcatatagatgaacctgaaatggagaaagctatgcgaatttgaaaaaatatattcactagtacatttgtttctatgacacgtctcagctaaacgtcaactgtattttcttggtgctaatgttgctgtgcttttgctcagtgttcttgttcatagcggaggagtacatggcggtcactactatgctttcatacggcctacgctatcagaccagtggtgtgtaaaaatttatacctcttgtattgtacctcaatactttctttgagttaaagatattctgggtatattttgttttggtcatgctaacattcacagccatttggtggtagagtaactaaattagcagggtctagggcctggcattcttgtgctcataacatgtactccctctgccccaaaatatagcaacttctagatttcaaaatttgttccagaatatagcaacttctccacccacttcctcatctcaaccaaattacaaatctctctcgtttaatttgtccacctacttccttgtttcaaccaaatcacaaccatcccccatttaagtccacctacttgcttaatcactgtgcggaactccagaaattcttgtatttttgggacagagggagttgctggttgttggcactgaactcacaacgttttcctcatggatgccaggcatggaattaaactgggatatagtctttatactacttaaaaagaactatagttaaattacgcctgttcactactacccatcctagcttcatcaatcatccgagttcagtatcttcaatctgtaatcctcaattgtatgtctgccagcatatattgcacgatagaattaagtttgctaagtagcctgcttgcacatcgacaattgaccatctgcagcaccaatccattgtcttagagtttctgaccataatgtgtcctgtctgatagctacccccccccctcgtccctaaaagagtgtcgaggttcctagctataaagacactcttttagggacagaggcagtatatatctaggtaaacaattctgaacatgccacaatttatgtattcgtttggctgcatgctgtcatttcaggtataaatttgatgatgaacgagtaacAaaaAGAAGATACCAAAAAAGCCCTTGAAGAGCAGTATGGGGGTGAAGAAGAGGTCGTTTTTACTATTAATAACTGTTCATTAAGTGCAATTCACTGATTttagtggttgcagcaatttccctcatcttgtatttatgtcatcatcttatttgtttctcttttggatggaacagttgcctcaaataaaccctggtttcaataacaccccatttaaattcacaaagtattcgaatgcctacatgcttgtctatattcgtgagagcgacaaggataaaataatgtgtaatgtagatgaaaaggacatcgctgagcatttgcgggtaagtatcatgcatattctcctaccttcctattcagtattttatacatttttcaggtgttttgagggaattcaactgtgctcttgcagataaggttgaagaaagaacaagaagagaaggaacacaagaagaaggaaaaagctgaagctcatctctacaccatcataaaggtctggataagaacctgttttagttttaatggtttaaatctcattgtgaacttttttttataatggctatgtgcaatgtccctaggttgcccgagatgaggatttgaaggaacagattggtaagaatatatattttgatctggtggaccatgaaaaggttcgcagcttccgcatacagaagcaactaccttttacttcatttaaggtaaccattcctaaacacctagtttttcataacaaggatacgctgttaagtttctgtgatataggcctataacctattttagggttttgcactgctaccttttgtgttcctgagctcaaattcaagcccctccaaaacctaattttgttccttttgttatctagaccaatactgtaacttcctaaattatttattattttattatgctttcaaatatttttatctcatttattattgaattaactgttcacaggaggaagtcgcaaaggaatgtgggatccctgtgcagtttcagcgcttctggctgtgggctaagaggcaaaatcatacataccgaccgaatcgtccactgggccctcatgaagaatcacaatcagtgagtcatatattgtttcctgaagttcaaaattttagtcctttgaactaatttaaagagttgggaaatattcttttgttactgttgtaatcaccctagcaaactttttttagttcagcaatgattttttttcttgcttcatatttttcttttcattttatggtcggaaataacctccatatttacttgctaccattctcttgtatgtgttattctgtttgtgattatatcttattacttatattgcataggtggggcaacttagggaggtctctaacaaggcgcacaatgctgagttgaagttgtttctggaagtagagactggagtggtagtaacattctacaatagctgtttattctttatatttctgtttcactatcaattatctttcaagattttagaaatttgaccatgtctatttattattgtataggatctgcggcccattcgtccacctgagaagagcaaggaggatatactacttttctttaaactttataaccctgaaaaggaagaactttggtatatattttcatatctattttgcaagcatcctttAaaaaaaattagtacaattttaaaaaattagtacaaagactcacgtggtgaagtcattttgttgtacagttttgttggtaggctttttgtgaaggctacgggaaaaccatctgaaatcctgacaaaattgaatgaaatggctggatttgctccaaatgaagaaattgagctatatgaggtgagggtcatattcagttctcgatgattacgtggtaatatcattacatgctacataaaaccatcttactctcagagcacagtcgcatgatctactcatgtgctccttttgctctcatagctccagcctccagtggttataattcaagtttctttttattgtgttgttaatatagcattactctgacttgaaagtgatgtagtgatgcttttcccatgattaacactctgagctatttggcatttttatgctgcaggaaattaagtttgagccaaatgtgatgtgcgaacacattgacaagaaactaactttccgttccagtcaggtttgaaagaaatcgtcacctttttagatgcaaacttttttagttttctagttcaagattgtgatggcttctctaaattgtcccatgctccattgttctttctaatgctgcagcttgaagatggggacataatatgtttccaaaagtcacctgtgttagatggggagactcaagtgcggtatccagacgttccttcatttttggagtatgtgcataatagacaggtacactcagatacacatcaagtgtagcattttgaacttgttcttatgttttattaacttatgtgtcctttagttgtcatttgatgcgctgttttagccctttttttttctagtctctcgtctacttatttcgatgtattcggtgttcatggtaatctcgtcacgaattgctatatatggatttgttctactattctagctacatagaactgctatgctttttttccgttactttttgtcacAaaaatacatgattatatatgtgcatctgtgcctttctacatAaaacccaatcttgtttactttttctgagctttctagtaactcttcttttgtttatattataggtggtgcacttccggtctttggagaaaccaaaggaggatgatttttgtttggaattgtgagggcttgcaaatcactatgtttcttatttaaaaaattaaactattattttgcaaaaaagcttacatatcaatatttcttgctttcacttaggtcgaagcttcatacttatgatgatgttgttgagagagttgcacgccaacttggcttggatgatccatcaaaaattcgccttacatctcacaactgttattcccagcaacctaaaccacagcctatcagatatcgtggtgtagagcacctattggatatgcttgttcattacaatcaggtatattcttctttatttgcgacataagcactacatgaccattgggcttatattttattttcacgcctggcttttgcagacttctgacatcttgtattacgaggttctggacattccactgccagaattgcagtgtttgaaaactcttaaagttgcattccaccatgcaactaaagatgaggtttgtctgccaacattttagtacttcttacctctgtctttagttgcaagtatatttctgatccacaacatgccaggttgtaatccatagcataagactaccgaaaaacagcaccatcagtgatgtgattactgacctaaaaaccaaggtgatcacttatctgtttttctggtttatccattctcttgcatcgtttatcctgaaaactgataacttggtgctatctattgagttctctcttatcttgttactataagctgttttatttttcatgaagagtgcctactatcctgatccaatcctgatcttttaatgtcaacaggttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctaccacaagatttataaggtccttggatgttctgctttgcattttgatagtctttattttctgaagaccgtttggaaattagtattatattttccttacattattaaccccttgttgtgtaaataatttatctgtagatatttccacctcacgagaaaatagagaacataaatgatcagtactggacactacgtgctgaggaggttcgtttgaacatcttttctgactgacgatattgacataattccatttagttagtatactactgtcattatattattgatttgcataacatttttgctaccaattgaaacagataccagaggaagagaagaaccttggccctcatgatcggttgattcatgtttaccatttcatgaaagatcctaatcaaaatcaggtactgcaatttccatatgattaccttgataattactactctaatctagtgtaaaatattgcgttgggaaaattgctacagcctacagatacagatgagctctcatccattatcagttttgacattgcttttatgactaacagcagattcagaattttggagatccatttttgctggttatccgtgaaggtgaaactgcagcagagatattagaacgaattcagaaaaaacttcgagttcctgatgaggaattctccaaggtaaccttcatttttatgtttcctaactgttcttttactatatgttctctcctgcatgttctgttagatggtagtggaggtggcatatatttaatctatctgttgctccaatgttAaaaaaaaaagaaatcctccacagtatatgtgacacatattcaaatgtcaaaatatgtgaccgctttcatattcaagttccttaattatgctggaatatttttagtgagctgaagggttagtactggtgtacgattccctgtcaactgatgtgcctggggtatttcttattttctcacaatacagaaatttattcttatcaacaaacgcaagaaaaaaaaaagaaatgtatttcttattagatcataaatgaaaatcacgggtaaaatcatagaagagaagatttcctaggtttgtatgcactaccaattcttaggaataccacaagaaggcctgctactttgatatttggatctaggatatattggcaatttaactaagggacaaggaatttgagagagaatagatctaatttggtaggcactgaaataaaattataagaccacttaaaataacagaaatttggtaacccattcttgtccaactgtagatgttagtactttaactgctgtcttccatctgatcatcttttctctataattttacggccaacatggatctctcatgccggtaatgcttatttgaacagtggaagcttgcattcatatctatgaatcggcctgaatacctccaggatgtcgacgttgtatctgcacgttttcaggcaagttataattttaacatgctaggaagctaggcatgtccatatgtgtacctccttttcttgaccgctgttcatgccatgatgtatcttctgattctgcagaggagagatgtttatggagcttgggaacaataccttggcttggaacatactgacacaacaccaaaaaggtcttatacagccaatcaggtaatcagtgttggctaataatggtttttgcgtacaattcaaaactggcaagaaataatctgagtgtttaagatttaagagtgtaaatatctgtttatttttatatctaagcacatgcaaacccattttacgaatgtgagcacacaatgttcgtatttctattctaaacaatctgctgtcaatccggttaacctgatgccgaacaaaATaagcgtgcagtttgtttaactaaatgtccaagagattaatgggctgtttgctgctttgcttctagtgaagtgagcaaatcagcagcctcggcaactctcttctttgccagttaatagcaatcgtgcaggtctcttgccttctatattcagattacactgaaaaatatatttgctaaactgatttgtaaaagctgatatgcaccactgctatacaaaacaaatgaagattatttacacagatatgatttgcatgatctttgcaaatgaataagatttgaaatgtagaaaaatgttacacctgctatgtttttccaatttctaaaatgaaagctaactgtccaattggatgtgggttgttggtctatacgtgcacgtacatactcaattcagcatccaatctatatatcctatatagttggaaccaaaaatctctacatgcattgagccacatcacctagaaaatatttgccattggatctttcatgcgtttaatctcaaccatccttcatgtattcagttacatttcttttatttattgatggtcattacttctatgcattcatatagatgacacttattttcctcctgcctttattttcaaatgcaatatttctgcagctcaatgtaatatttttctgctcaatagttcatactaaatctgtatatccaaaattgttctactatacctgcaacaacatgtggggtatcatctactccctctgtcccaaaatataagacctagaaccggatgggacatttcctagtactacgaatctggacaggcctgtccagattcgtagtactaggaaatgtcccatccattcctaggttcttttattttgggatggagggagtagttagtttgatggatatcccgttcgatagaatcaccactgcacgtgactacatgagaatcttgcctatagtcacgtgcagtgttgaaaaaaaagtaaagggagaaatgagtatgtttacttttttcattttgttttgtaacagtgttgcatgtgcttagattaagaaaaaattcgggtgtaaacgtactcatttctccctttacttttttttttcaagaaatcattactggttattttgggctaatatttttgttgcattgaatgcaatgtgtgcatgtgtaaaagtaagctgggttgattaatggtgtttcgaaattatctgtattattatagcagtgttttccatgtaattgttctttactctggttattcaaactatgcagaatcgtcacacttttgagaagcctgtgaaaatttataattgagaagatttatagctgggcttgaagcgctgaacaaaggcctcgtctggatagcatgccatgccaaagagagatcacaaagtaagacaacctcaacagaagaaacatggcaacaaaacatatggccattacgctgaggcctatattgcttcccgctggttgacgccgttggtgcagcttactcgtgatgtagtgggcgtcagggattttttttcaaggctttccatcttgtttccgggcaaaacaattgtgtcgagtgtgatggccccgctaggataaggtagatgttgctttatttgtgtagagcaaagctggtacataagaaaaagattttggtaggggcatgtatacagaattatagccgtgactgattgctttatttgcttctcccgtttctgttagccttggagcagtgggagaatcgtataatggggtttggtgttggttccaattttccatgtctattgataaaatgtaagagaataatttgccagatagtgcagctttcagttcctgttagcataaccttgtgtcggtgctgttctattcgttgtgatttgacaacccatgaagatcagtttacagtctgtcatttgcttgtAaaattacgtggaacccttgttttaa
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| CDS seq | atgactatgatgactcctCCccccatcgagCAgcagcagcaggaggacgaggagatgctcgtgccgcaccaggagctccccgccgccgccgccgctgtcgtcgccgacgccgtgcagccgatggaagttgtggcgcagacagagcctgccaacgcggcagagagccagccgccggaggacccgcagacgtcgcggttcacgtggacgatcgagaacttcaccaggatcaacgggaagaagcactactcggagccgtttgttgttggaggattcaaatggcgtgtgctgattttccctaaggggaacaatgtggaccatttctctatgtatttggatgtcgcggactcggtgaatctcccttatggatggaaccggtatgctcagttcagcttggctgttgtgaaccagatccatccgaagtataccattcggaaagatactcaacatcaatttaatgcacgtgagagtgactggggtttcacatcttttatgcctttgagtgatctgtatgacccaagtaggggctaccttgttaatgacaccgttgttgtggaagctgaggttgctgttcgcagaatggttgattactggacttatgactcgAaaaaggaaacaggatatgttggtctaaagaatcaaggagctacctgttatatgaactctcttctacaaacactgtaccatataccatatttcaggaaggctgtatatcatatgccaactactgagaatgacatgccatctgggagtattcctttagccctgcagagccttttttacaagctccaatacagcgacaatagcgtagctacaaaggagttgaccaaatcttttggatgggacacttatgattctttcatgcagcatgatgttcaagagcttaacagagttctttgtgagaaacttgaagacaaaatgaaggaaactgttgtggaaggaacaattgaacaattatttgaaggccaccacataaactatatcgagtgcattaatgttgattataaatctaacagaaaagaatccttttatgatctacagcttgatgtcaaaggttgtcgtgatgtttatgcatcatttgataaatatgtcgaagtggagcgtctagagggtgataacaaatatcatgcagagcagtatggcttacaggatgcaaagaagggagtactcttccttgatttccctcctgttttgcaacttcaactgaagcgttttgaatatgattacatgcgagatacaatggtcaagattaatgaccggtatgagttcccacttcaacttgatcttgacagagatgatgggaaatatcttgctcctgatgcagatagaagcattagaaacctttacactcttcacagtgttcttgttcatagcggaggagtacatggcggtcactactatgctttcatacggcctacgctatcagaccagtggtgtttgcctcaaataaaccctggtttcaataacaccccatttaaattcacaaagtattcgaatgcctacatgcttgtctatattcgtgagagcgacaaggataaaataatgtgtaatgtagatgaaaaggacatcgctgagcatttgcggataaggttgaagaaagaacaagaagagaaggaacacaagaagaaggaaaaagctgaagctcatctctacaccatcataaaggttgcccgagatgaggatttgaaggaacagattggtaagaatatatattttgatctggtggaccatgaaaaggttcgcagcttccgcatacagaagcaactaccttttacttcatttaaggaggaagtcgcaaaggaatgtgggatccctgtgcagtttcagcgcttctggctgtgggctaagaggcaaaatcatacataccgaccgaatcgtccactgggccctcatgaagaatcacaatcagtggggcaacttagggaggtctctaacaaggcgcacaatgctgagttgaagttgtttctggaagtagagactggagtggatctgcggcccattcgtccacctgagaagagcaaggaggatatactacttttctttaaactttataaccctgaaaaggaagaactttgttttgttggtaggctttttgtgaaggctacgggaaaaccatctgaaatcctgacaaaattgaatgaaatggctggatttgctccaaatgaagaaattgagctatatgaggaaattaagtttgagccaaatgtgatgtgcgaacacattgacaagaaactaactttccgttccagtcagcttgaagatggggacataatatgtttccaaaagtcacctgtgttagatggggagactcaagtgcggtatccagacgttccttcatttttggagtatgtgcataatagacaggtggtgcacttccggtctttggagaaaccaaaggaggatgatttttgtttggaattgtcgaagcttcatacttatgatgatgttgttgagagagttgcacgccaacttggcttggatgatccatcaaaaattcgccttacatctcacaactgttattcccagcaacctaaaccacagcctatcagatatcgtggtgtagagcacctattggatatgcttgttcattacaatcagacttctgacatcttgtattacgaggttctggacattccactgccagaattgcagtgtttgaaaactcttaaagttgcattccaccatgcaactaaagatgaggttgtaatccatagcataagactaccgaaaaacagcaccatcagtgatgtgattactgacctaaaaaccaaggttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctaccacaagatttataagatatttccacctcacgagaaaatagagaacataaatgatcagtactggacactacgtgctgaggagataccagaggaagagaagaaccttggccctcatgatcggttgattcatgtttaccatttcatgaaagatcctaatcaaaatcagcagattcagaattttggagatccatttttgctggttatccgtgaaggtgaaactgcagcagagatattagaacgaattcagaaaaaacttcgagttcctgatgaggaattctccaagaggagagatgtttatggagcttgggaacaataccttggcttggaacatactgacacaacaccaaaaaggtcttatacagccaatcagaatcgtcacacttttgagaagcctgtgaaaatttataattga
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| Protein seq | MTMMTPPPIEQQQQEDEEMLVPHQELPAAAAAVVADAVQPMEVVAQTEPANAAESQPPEDPQTSRFTWTIENFTRINGKKHYSEPFVVGGFKWRVLIFPKGNNVDHFSMYLDVADSVNLPYGWNRYAQFSLAVVNQIHPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVVVEAEVAVRRMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKETVVEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLDRDDGKYLAPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWCLPQINPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCNVDEKDIAEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKEQIGKNIYFDLVDHEKVRSFRIQKQLPFTSFKEEVAKECGIPVQFQRFWLWAKRQNHTYRPNRPLGPHEESQSVGQLREVSNKAHNAELKLFLEVETGVDLRPIRPPEKSKEDILLFFKLYNPEKEELCFVGRLFVKATGKPSEILTKLNEMAGFAPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIICFQKSPVLDGETQVRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLELSKLHTYDDVVERVARQLGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKVAFHHATKDEVVIHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVFYHKIYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQNFGDPFLLVIREGETAAEILERIQKKLRVPDEEFSKRRDVYGAWEQYLGLEHTDTTPKRSYTANQNRHTFEKPVKIYN |
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| Function | Ubiquitin carboxyl-terminal hydrolase 12 [UniProtKB/Swiss-Prot:Q9FPT1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_12g0013200 | OsPr106_12g0013200.02 | Chr12 | 17425802 | 17438360 | + | NAM | ||
| CDS seq | atgactatgatgactcctCCccccatcgagcagcagcaggaggacgaggagatgctcgtgccgcaccaggagctccccgccgccgccgccgctgtcgtcgccgacgccgtgcagccgatggaagttgtggcgcagacagagcctgccaacgcggcagagagccagccgccggaggacccgcagacgtcgcggttcacgtggacgatcgagaacttcaccaggatcaacgggaagaagcactactcggagccgtttgttgttggaggattcaaatggcgtgtgctgattttccctaaggggaacaatgtggaccatttctctatgtatttggatgtcgcggactcggtgaatctcccttatggatggaaccggtatgctcagttcagcttggctgttgtgaaccagatccatccgaagtataccattcggaaagatactcaacatcaatttaatgcacgtgagagtgactggggtttcacatcttttatgcctttgagtgatctgtatgacccaagtaggggctaccttgttaatgacaccgttgttgtggaagctgaggttgctgttcgcagaatggttgattactggacttatgactcgAaaaaggaaacaggatatgttggtctaaagaatcaaggagctacctgttatatgaactctcttctacaaacactgtaccatataccatatttcaggaaggctgtatatcatatgccaactactgagaatgacatgccatctgggagtattcctttagccctgcagagccttttttacaagctccaatacagcgacaatagcgtagctacaaaggagttgaccaaatcttttggatgggacacttatgattctttcatgcagcatgatgttcaagagcttaacagagttctttgtgagaaacttgaagacaaaatgaaggaaactgttgtggaaggaacaattgaacaattatttgaaggccaccacataaactatatcgagtgcattaatgttgattataaatctaacagaaaagaatccttttatgatctacagcttgatgtcaaaggttgtcgtgatgtttatgcatcatttgataaatatgtcgaagtggagcgtctagagggtgataacaaatatcatgcagagcagtatggcttacaggatgcaaagaagggagtactcttccttgatttccctcctgttttgcaacttcaactgaagcgttttgaatatgattacatgcgagatacaatggtcaagattaatgaccggtatgagttcccacttcaacttgatcttgacagagatgatgggaaatatcttgctcctgatgcagatagaagcattagaaacctttacactcttcacagtgttcttgttcatagcggaggagtacatggcggtcactactatgctttcatacggcctacgctatcagaccagtggtgtttgcctcaaataaaccctggtttcaataacaccccatttaaattcacaaagtattcgaatgcctacatgcttgtctatattcgtgagagcgacaaggataaaataatgtgtaatgtagatgaaaaggacatcgctgagcatttgcggataaggttgaagaaagaacaagaagagaaggaacacaagaagaaggaaaaagctgaagctcatctctacaccatcataaaggttgcccgagatgaggatttgaaggaacagattggtaagaatatatattttgatctggtggaccatgaaaaggttcgcagcttccgcatacagaagcaactaccttttacttcatttaaggaggaagtcgcaaaggaatgtgggatccctgtgcagtttcagcgcttctggctgtgggctaagaggcaaaatcatacataccgaccgaatcgtccactgggccctcatgaagaatcacaatcagtggggcaacttagggaggtctctaacaaggcgcacaatgctgagttgaagttgtttctggaagtagagactggagtggatctgcggcccattcgtccacctgagaagagcaaggaggatatactacttttctttaaactttataaccctgaaaaggaagaactttgttttgttggtaggctttttgtgaaggctacgggaaaaccatctgaaatcctgacaaaattgaatgaaatggctggatttgctccaaatgaagaaattgagctatatgaggaaattaagtttgagccaaatgtgatgtgcgaacacattgacaagaaactaactttccgttccagtcagcttgaagatggggacataatatgtttccaaaagtcacctgtgttagatggggagactcaagtgcggtatccagacgttccttcatttttggagtatgtgcataatagacaggtggtgcacttccggtctttggagaaaccaaaggaggatgatttttgtttggaattgtcgaagcttcatacttatgatgatgttgttgagagagttgcacgccaacttggcttggatgatccatcaaaaattcgccttacatctcacaactgttattcccagcaacctaaaccacagcctatcagatatcgtggtgtagagcacctattggatatgcttgttcattacaatcagacttctgacatcttgtattacgaggttctggacattccactgccagaattgcagtgtttgaaaactcttaaagttgcattccaccatgcaactaaagatgaggttgtaatccatagcataagactaccgaaaaacagcaccatcagtgatgtgattactgacctaaaaaccaaggttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctaccacaagatttataagatatttccacctcacgagaaaatagagaacataaatgatcagtactggacactacgtgctgaggagataccagaggaagagaagaaccttggccctcatgatcggttgattcatgtttaccatttcatgaaagatcctaatcaaaatcagcagattcagaattttggagatccatttttgctggttatccgtgaaggtgaaactgcagcagagatattagaacgaattcagaaaaaacttcgagttcctgatgaggaattctccaagtggaagcttgcattcatatctatgaatcggcctgaatacctccaggatgtcgacgttgtatctgcacgttttcaggcaagttataattttaacatgctaggaagctag
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| Protein seq | MTMMTPPPIEQQQEDEEMLVPHQELPAAAAAVVADAVQPMEVVAQTEPANAAESQPPEDPQTSRFTWTIENFTRINGKKHYSEPFVVGGFKWRVLIFPKGNNVDHFSMYLDVADSVNLPYGWNRYAQFSLAVVNQIHPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVVVEAEVAVRRMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKETVVEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLDRDDGKYLAPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWCLPQINPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCNVDEKDIAEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKEQIGKNIYFDLVDHEKVRSFRIQKQLPFTSFKEEVAKECGIPVQFQRFWLWAKRQNHTYRPNRPLGPHEESQSVGQLREVSNKAHNAELKLFLEVETGVDLRPIRPPEKSKEDILLFFKLYNPEKEELCFVGRLFVKATGKPSEILTKLNEMAGFAPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIICFQKSPVLDGETQVRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLELSKLHTYDDVVERVARQLGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKVAFHHATKDEVVIHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVFYHKIYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQNFGDPFLLVIREGETAAEILERIQKKLRVPDEEFSKWKLAFISMNRPEYLQDVDVVSARFQASYNFNMLGS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_12g0013200 | OsPr106_12g0013200.03 | Chr12 | 17425904 | 17440631 | + | NAM | ||
| CDS seq | atgactatgatgactcctCCccccatcgagCAgcagcagcaggaggacgaggagatgctcgtgccgcaccaggagctccccgccgccgccgccgctgtcgtcgccgacgccgtgcagccgatggaagttgtggcgcagacagagcctgccaacgcggcagagagccagccgccggaggacccgcagacgtcgcggttcacgtggacgatcgagaacttcaccaggatcaacgggaagaagcactactcggagccgtttgttgttggaggattcaaatggcgtgtgctgattttccctaaggggaacaatgtggaccatttctctatgtatttggatgtcgcggactcggtgaatctcccttatggatggaaccggtatgctcagttcagcttggctgttgtgaaccagatccatccgaagtataccattcggaaagatactcaacatcaatttaatgcacgtgagagtgactggggtttcacatcttttatgcctttgagtgatctgtatgacccaagtaggggctaccttgttaatgacaccgttgttgtggaagctgaggttgctgttcgcagaatggttgattactggacttatgactcgAaaaaggaaacaggatatgttggtctaaagaatcaaggagctacctgttatatgaactctcttctacaaacactgtaccatataccatatttcaggaaggctgtatatcatatgccaactactgagaatgacatgccatctgggagtattcctttagccctgcagagccttttttacaagctccaatacagcgacaatagcgtagctacaaaggagttgaccaaatcttttggatgggacacttatgattctttcatgcagcatgatgttcaagagcttaacagagttctttgtgagaaacttgaagacaaaatgaaggaaactgttgtggaaggaacaattgaacaattatttgaaggccaccacataaactatatcgagtgcattaatgttgattataaatctaacagaaaagaatccttttatgatctacagcttgatgtcaaaggttgtcgtgatgtttatgcatcatttgataaatatgtcgaagtggagcgtctagagggtgataacaaatatcatgcagagcagtatggcttacaggatgcaaagaagggagtactcttccttgatttccctcctgttttgcaacttcaactgaagcgttttgaatatgattacatgcgagatacaatggtcaagattaatgaccggtatgagttcccacttcaacttgatcttgacagagatgatgggaaatatcttgctcctgatgcagatagaagcattagaaacctttacactcttcacagtgttcttgttcatagcggaggagtacatggcggtcactactatgctttcatacggcctacgctatcagaccagtggtgtttgcctcaaataaaccctggtttcaataacaccccatttaaattcacaaagtattcgaatgcctacatgcttgtctatattcgtgagagcgacaaggataaaataatgtgtaatgtagatgaaaaggacatcgctgagcatttgcggataaggttgaagaaagaacaagaagagaaggaacacaagaagaaggaaaaagctgaagctcatctctacaccatcataaaggttgcccgagatgaggatttgaaggaacagattggtaagaatatatattttgatctggtggaccatgaaaaggttcgcagcttccgcatacagaagcaactaccttttacttcatttaaggaggaagtcgcaaaggaatgtgggatccctgtgcagtttcagcgcttctggctgtgggctaagaggcaaaatcatacataccgaccgaatcgtccactgggccctcatgaagaatcacaatcagtggggcaacttagggaggtctctaacaaggcgcacaatgctgagttgaagttgtttctggaagtagagactggagtggatctgcggcccattcgtccacctgagaagagcaaggaggatatactacttttctttaaactttataaccctgaaaaggaagaactttgttttgttggtaggctttttgtgaaggctacgggaaaaccatctgaaatcctgacaaaattgaatgaaatggctggatttgctccaaatgaagaaattgagctatatgaggaaattaagtttgagccaaatgtgatgtgcgaacacattgacaagaaactaactttccgttccagtcagcttgaagatggggacataatatgtttccaaaagtcacctgtgttagatggggagactcaagtgcggtatccagacgttccttcatttttggagtatgtgcataatagacaggtggtgcacttccggtctttggagaaaccaaaggaggatgatttttgtttggaattgtcgaagcttcatacttatgatgatgttgttgagagagttgcacgccaacttggcttggatgatccatcaaaaattcgccttacatctcacaactgttattcccagcaacctaaaccacagcctatcagatatcgtggtgtagagcacctattggatatgcttgttcattacaatcagacttctgacatcttgtattacgaggttctggacattccactgccagaattgcagtgtttgaaaactcttaaagttgcattccaccatgcaactaaagatgaggttgtaatccatagcataagactaccgaaaaacagcaccatcagtgatgtgattactgacctaaaaaccaaggttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctaccacaagatttataagatatttccacctcacgagaaaatagagaacataaatgatcagtactggacactacgtgctgaggagataccagaggaagagaagaaccttggccctcatgatcggttgattcatgtttaccatttcatgaaagatcctaatcaaaatcagcagattcagaattttggagatccatttttgctggttatccgtgaaggtgaaactgcagcagagatattagaacgaattcagaaaaaacttcgagttcctgatgaggaattctccaagaggagagatgtttatggagcttgggaacaataccttggcttggaacatactgacacaacaccaaaaaggtcttatacagccaatcagaatcgtcacacttttgagaagcctgtgaaaatttataattga
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| Protein seq | MTMMTPPPIEQQQQEDEEMLVPHQELPAAAAAVVADAVQPMEVVAQTEPANAAESQPPEDPQTSRFTWTIENFTRINGKKHYSEPFVVGGFKWRVLIFPKGNNVDHFSMYLDVADSVNLPYGWNRYAQFSLAVVNQIHPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVVVEAEVAVRRMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKETVVEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLDRDDGKYLAPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWCLPQINPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCNVDEKDIAEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKEQIGKNIYFDLVDHEKVRSFRIQKQLPFTSFKEEVAKECGIPVQFQRFWLWAKRQNHTYRPNRPLGPHEESQSVGQLREVSNKAHNAELKLFLEVETGVDLRPIRPPEKSKEDILLFFKLYNPEKEELCFVGRLFVKATGKPSEILTKLNEMAGFAPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIICFQKSPVLDGETQVRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLELSKLHTYDDVVERVARQLGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKVAFHHATKDEVVIHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVFYHKIYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQNFGDPFLLVIREGETAAEILERIQKKLRVPDEEFSKRRDVYGAWEQYLGLEHTDTTPKRSYTANQNRHTFEKPVKIYN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_12g0013200 | OsPr106_12g0013200.04 | Chr12 | 17425904 | 17438360 | + | NAM | ||
| CDS seq | atgactatgatgactcctCCccccatcgagCAgcagcagcaggaggacgaggagatgctcgtgccgcaccaggagctccccgccgccgccgccgctgtcgtcgccgacgccgtgcagccgatggaagttgtggcgcagacagagcctgccaacgcggcagagagccagccgccggaggacccgcagacgtcgcggttcacgtggacgatcgagaacttcaccaggatcaacgggaagaagcactactcggagccgtttgttgttggaggattcaaatggcgtgtgctgattttccctaaggggaacaatgtggaccatttctctatgtatttggatgtcgcggactcggtgaatctcccttatggatggaaccggtatgctcagttcagcttggctgttgtgaaccagatccatccgaagtataccattcggaaagatactcaacatcaatttaatgcacgtgagagtgactggggtttcacatcttttatgcctttgagtgatctgtatgacccaagtaggggctaccttgttaatgacaccgttgttgtggaagctgaggttgctgttcgcagaatggttgattactggacttatgactcgAaaaaggaaacaggatatgttggtctaaagaatcaaggagctacctgttatatgaactctcttctacaaacactgtaccatataccatatttcaggaaggctgtatatcatatgccaactactgagaatgacatgccatctgggagtattcctttagccctgcagagccttttttacaagctccaatacagcgacaatagcgtagctacaaaggagttgaccaaatcttttggatgggacacttatgattctttcatgcagcatgatgttcaagagcttaacagagttctttgtgagaaacttgaagacaaaatgaaggaaactgttgtggaaggaacaattgaacaattatttgaaggccaccacataaactatatcgagtgcattaatgttgattataaatctaacagaaaagaatccttttatgatctacagcttgatgtcaaaggttgtcgtgatgtttatgcatcatttgataaatatgtcgaagtggagcgtctagagggtgataacaaatatcatgcagagcagtatggcttacaggatgcaaagaagggagtactcttccttgatttccctcctgttttgcaacttcaactgaagcgttttgaatatgattacatgcgagatacaatggtcaagattaatgaccggtatgagttcccacttcaacttgatcttgacagagatgatgggaaatatcttgctcctgatgcagatagaagcattagaaacctttacactcttcacagtgttcttgttcatagcggaggagtacatggcggtcactactatgctttcatacggcctacgctatcagaccagtggtgtttgcctcaaataaaccctggtttcaataacaccccatttaaattcacaaagtattcgaatgcctacatgcttgtctatattcgtgagagcgacaaggataaaataatgtgtaatgtagatgaaaaggacatcgctgagcatttgcggataaggttgaagaaagaacaagaagagaaggaacacaagaagaaggaaaaagctgaagctcatctctacaccatcataaaggttgcccgagatgaggatttgaaggaacagattggtaagaatatatattttgatctggtggaccatgaaaaggttcgcagcttccgcatacagaagcaactaccttttacttcatttaaggaggaagtcgcaaaggaatgtgggatccctgtgcagtttcagcgcttctggctgtgggctaagaggcaaaatcatacataccgaccgaatcgtccactgggccctcatgaagaatcacaatcagtggggcaacttagggaggtctctaacaaggcgcacaatgctgagttgaagttgtttctggaagtagagactggagtggatctgcggcccattcgtccacctgagaagagcaaggaggatatactacttttctttaaactttataaccctgaaaaggaagaactttgttttgttggtaggctttttgtgaaggctacgggaaaaccatctgaaatcctgacaaaattgaatgaaatggctggatttgctccaaatgaagaaattgagctatatgaggaaattaagtttgagccaaatgtgatgtgcgaacacattgacaagaaactaactttccgttccagtcagcttgaagatggggacataatatgtttccaaaagtcacctgtgttagatggggagactcaagtgcggtatccagacgttccttcatttttggagtatgtgcataatagacaggtggtgcacttccggtctttggagaaaccaaaggaggatgatttttgtttggaattgtcgaagcttcatacttatgatgatgttgttgagagagttgcacgccaacttggcttggatgatccatcaaaaattcgccttacatctcacaactgttattcccagcaacctaaaccacagcctatcagatatcgtggtgtagagcacctattggatatgcttgttcattacaatcagacttctgacatcttgtattacgaggttctggacattccactgccagaattgcagtgtttgaaaactcttaaagttgcattccaccatgcaactaaagatgaggttgtaatccatagcataagactaccgaaaaacagcaccatcagtgatgtgattactgacctaaaaaccaaggttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctaccacaagatttataagatatttccacctcacgagaaaatagagaacataaatgatcagtactggacactacgtgctgaggagataccagaggaagagaagaaccttggccctcatgatcggttgattcatgtttaccatttcatgaaagatcctaatcaaaatcagcagattcagaattttggagatccatttttgctggttatccgtgaaggtgaaactgcagcagagatattagaacgaattcagaaaaaacttcgagttcctgatgaggaattctccaagtggaagcttgcattcatatctatgaatcggcctgaatacctccaggatgtcgacgttgtatctgcacgttttcaggcaagttataattttaacatgctaggaagctag
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| Protein seq | MTMMTPPPIEQQQQEDEEMLVPHQELPAAAAAVVADAVQPMEVVAQTEPANAAESQPPEDPQTSRFTWTIENFTRINGKKHYSEPFVVGGFKWRVLIFPKGNNVDHFSMYLDVADSVNLPYGWNRYAQFSLAVVNQIHPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVVVEAEVAVRRMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKETVVEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLDRDDGKYLAPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWCLPQINPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCNVDEKDIAEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKEQIGKNIYFDLVDHEKVRSFRIQKQLPFTSFKEEVAKECGIPVQFQRFWLWAKRQNHTYRPNRPLGPHEESQSVGQLREVSNKAHNAELKLFLEVETGVDLRPIRPPEKSKEDILLFFKLYNPEKEELCFVGRLFVKATGKPSEILTKLNEMAGFAPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIICFQKSPVLDGETQVRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLELSKLHTYDDVVERVARQLGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKVAFHHATKDEVVIHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVFYHKIYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQNFGDPFLLVIREGETAAEILERIQKKLRVPDEEFSKWKLAFISMNRPEYLQDVDVVSARFQASYNFNMLGS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_12g0013200 | OsPr106_12g0013200.01 | Chr12 | 17425802 | 17440631 | + | NAM | ||
| CDS seq | atgactatgatgactcctCCccccatcgagcagcagcaggaggacgaggagatgctcgtgccgcaccaggagctccccgccgccgccgccgctgtcgtcgccgacgccgtgcagccgatggaagttgtggcgcagacagagcctgccaacgcggcagagagccagccgccggaggacccgcagacgtcgcggttcacgtggacgatcgagaacttcaccaggatcaacgggaagaagcactactcggagccgtttgttgttggaggattcaaatggcgtgtgctgattttccctaaggggaacaatgtggaccatttctctatgtatttggatgtcgcggactcggtgaatctcccttatggatggaaccggtatgctcagttcagcttggctgttgtgaaccagatccatccgaagtataccattcggaaagatactcaacatcaatttaatgcacgtgagagtgactggggtttcacatcttttatgcctttgagtgatctgtatgacccaagtaggggctaccttgttaatgacaccgttgttgtggaagctgaggttgctgttcgcagaatggttgattactggacttatgactcgAaaaaggaaacaggatatgttggtctaaagaatcaaggagctacctgttatatgaactctcttctacaaacactgtaccatataccatatttcaggaaggctgtatatcatatgccaactactgagaatgacatgccatctgggagtattcctttagccctgcagagccttttttacaagctccaatacagcgacaatagcgtagctacaaaggagttgaccaaatcttttggatgggacacttatgattctttcatgcagcatgatgttcaagagcttaacagagttctttgtgagaaacttgaagacaaaatgaaggaaactgttgtggaaggaacaattgaacaattatttgaaggccaccacataaactatatcgagtgcattaatgttgattataaatctaacagaaaagaatccttttatgatctacagcttgatgtcaaaggttgtcgtgatgtttatgcatcatttgataaatatgtcgaagtggagcgtctagagggtgataacaaatatcatgcagagcagtatggcttacaggatgcaaagaagggagtactcttccttgatttccctcctgttttgcaacttcaactgaagcgttttgaatatgattacatgcgagatacaatggtcaagattaatgaccggtatgagttcccacttcaacttgatcttgacagagatgatgggaaatatcttgctcctgatgcagatagaagcattagaaacctttacactcttcacagtgttcttgttcatagcggaggagtacatggcggtcactactatgctttcatacggcctacgctatcagaccagtggtgtttgcctcaaataaaccctggtttcaataacaccccatttaaattcacaaagtattcgaatgcctacatgcttgtctatattcgtgagagcgacaaggataaaataatgtgtaatgtagatgaaaaggacatcgctgagcatttgcggataaggttgaagaaagaacaagaagagaaggaacacaagaagaaggaaaaagctgaagctcatctctacaccatcataaaggttgcccgagatgaggatttgaaggaacagattggtaagaatatatattttgatctggtggaccatgaaaaggttcgcagcttccgcatacagaagcaactaccttttacttcatttaaggaggaagtcgcaaaggaatgtgggatccctgtgcagtttcagcgcttctggctgtgggctaagaggcaaaatcatacataccgaccgaatcgtccactgggccctcatgaagaatcacaatcagtggggcaacttagggaggtctctaacaaggcgcacaatgctgagttgaagttgtttctggaagtagagactggagtggatctgcggcccattcgtccacctgagaagagcaaggaggatatactacttttctttaaactttataaccctgaaaaggaagaactttgttttgttggtaggctttttgtgaaggctacgggaaaaccatctgaaatcctgacaaaattgaatgaaatggctggatttgctccaaatgaagaaattgagctatatgaggaaattaagtttgagccaaatgtgatgtgcgaacacattgacaagaaactaactttccgttccagtcagcttgaagatggggacataatatgtttccaaaagtcacctgtgttagatggggagactcaagtgcggtatccagacgttccttcatttttggagtatgtgcataatagacaggtggtgcacttccggtctttggagaaaccaaaggaggatgatttttgtttggaattgtcgaagcttcatacttatgatgatgttgttgagagagttgcacgccaacttggcttggatgatccatcaaaaattcgccttacatctcacaactgttattcccagcaacctaaaccacagcctatcagatatcgtggtgtagagcacctattggatatgcttgttcattacaatcagacttctgacatcttgtattacgaggttctggacattccactgccagaattgcagtgtttgaaaactcttaaagttgcattccaccatgcaactaaagatgaggttgtaatccatagcataagactaccgaaaaacagcaccatcagtgatgtgattactgacctaaaaaccaaggttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctaccacaagatttataagatatttccacctcacgagaaaatagagaacataaatgatcagtactggacactacgtgctgaggagataccagaggaagagaagaaccttggccctcatgatcggttgattcatgtttaccatttcatgaaagatcctaatcaaaatcagcagattcagaattttggagatccatttttgctggttatccgtgaaggtgaaactgcagcagagatattagaacgaattcagaaaaaacttcgagttcctgatgaggaattctccaagaggagagatgtttatggagcttgggaacaataccttggcttggaacatactgacacaacaccaaaaaggtcttatacagccaatcagaatcgtcacacttttgagaagcctgtgaaaatttataattga
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| Protein seq | MTMMTPPPIEQQQEDEEMLVPHQELPAAAAAVVADAVQPMEVVAQTEPANAAESQPPEDPQTSRFTWTIENFTRINGKKHYSEPFVVGGFKWRVLIFPKGNNVDHFSMYLDVADSVNLPYGWNRYAQFSLAVVNQIHPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVVVEAEVAVRRMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKETVVEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLDRDDGKYLAPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWCLPQINPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCNVDEKDIAEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKEQIGKNIYFDLVDHEKVRSFRIQKQLPFTSFKEEVAKECGIPVQFQRFWLWAKRQNHTYRPNRPLGPHEESQSVGQLREVSNKAHNAELKLFLEVETGVDLRPIRPPEKSKEDILLFFKLYNPEKEELCFVGRLFVKATGKPSEILTKLNEMAGFAPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIICFQKSPVLDGETQVRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLELSKLHTYDDVVERVARQLGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKVAFHHATKDEVVIHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVFYHKIYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQNFGDPFLLVIREGETAAEILERIQKKLRVPDEEFSKRRDVYGAWEQYLGLEHTDTTPKRSYTANQNRHTFEKPVKIYN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_12g0013200 | OsPr106_12g0013200.05 | Chr12 | 17432376 | 17440525 | + | IsoSeq | ||
| CDS seq | atgaaaaggttcgcagcttccgcatacagaagcaactaccttttacttcatttaaggaggaagtcgcaaaggaatgtgggatccctgtgcagtttcagcgcttctggctgtgggctaagaggcaaaatcatacataccgaccgaatcgtccactgggccctcatgaagaatcacaatcagtggggcaacttagggaggtctctaacaaggcgcacaatgctg
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| Protein seq | MKRFAASAYRSNYLLLHLRRKSQRNVGSLCSFSASGCGLRGKIIHTDRIVHWALMKNHNQWGNLGRSLTRRTML |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr12 | 17426119 | 17426380 | + | OsPr106_12g0013200.04,OsPr106_12g0013200.03 | OsPr106_12g0013200.01,OsPr106_12g0013200.03,OsPr106_12g0013200.04,OsPr106_12g0013200.02 | All |
| SE | Chr12 | 17437549 | 17438430 | + | OsPr106_12g0013200.05 | OsPr106_12g0013200.05,OsPr106_12g0013200.03,OsPr106_12g0013200.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 34.077873 | 77.969604 | 83.331421 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0489200 | RBH | 6.035810 | 9.265041 | 6.435300 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g30540 | RBH | 5.465610 | 5.213951 | 3.030945 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0489200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0013640 | RBH | 2.193953 | 49.073418 | 22.707174 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0013820 | RBH | 1.122934 | 10.069027 | 12.790362 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0013710 | RBH | 4.840822 | 33.160431 | 38.119289 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0013530 | RBH | 0.960858 | 1.520828 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0018060 | RBH | 28.451653 | 38.803356 | 53.274380 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0251100 | RBH | 17.0082235 | 37.8278635 | 28.9259025 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0013360 | RBH | 1.187724 | 2.568885 | 4.324546 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0273000 | RBH | 19.978524 | 35.7936955 | 37.031015 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0013340 | RBH | 1.577979 | 1.112721 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0013680 | RBH | 2.311290 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0013540 | RBH | 12.471106 | 46.582584 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0013500 | RBH | 3.960941 | 0.0 | 5.163750 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0013690 | RBH | 1.559443 | 29.783054 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G013400 | RBH | 2.476998 | 11.318368 | 9.140575 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0013220 | RBH | 5.618284 | 51.651127 | 18.223034 |
