Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_11g0020270 OGI:11069030 | 14/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr11:26502113-26507425
Gene Symbol -
DNA seq

atggagggtgctgagagtatcgccgttggagcgatgggatctgttatcccaaagctcggtgctttgctcaaagaggaacacaagctgacaaaggaggcgaggggtaagattatgttgctcataaaagatctcgagggccttcagcttttccttcggagaatgttcgaggtggaagatcctgacattccaatgaagcttatggcgagggacatccgggagctgtcatatgatttagaggacagcgtcgacgagttcttgatccgcgcggagaagggcgagctcggcctgaatccacgcggtttgaagcgtatgattaacaagataacgagagcccaacgccagcatggaattgccagccagatacaccaactgcaggcccgcgtcaatgaagtgagcgagcggagaaacaggtacatgattgacgaggccgtctccacggctagcagcagcgaggccgtctccatgcccatggtggtggtggatcctcgtctctatacggatgcgtcaagcacccttgtcggcctcgactgcccgcgggaggagatcaccaagctgctcatggaggaggacgaatccgagtcggcacttcagctttgcgtggcctgtattgttgggatgggaggtattggcaagaccactcttgccaatcaggtctaccaaacaatggcgtctgaattcgattgccgagcttgggtggcagtatcacatcacccaaatattaaaaggattcttagggatatacttggccaaattcaacaagtcaaccttaatgagtaccgagacacaatggatgagaggcttctcatcgatgcgatcagaagcgcgctacaagataaaaggtactcaaatgctgctacataatctatttcaagatatttctgttaggtacttgtgagcatagttcagattagagaacaggagacaattttccggtacttatcagcatagctgtgagatggagattggttttcatcatttgtttttttgcatgtcacctaaatagccataaaagatgatagattaatatataggttgtatcactttacaaacatacaagtttaaatttgatttctacaagttgtaaaatatataaattaactgaaactgcaatgcgttcaatcacaattaaaactcgagggatgaaaacactttgccatatgagagagttaaatatgcacccctagatattgtttgagtgtatgtatgtagtcaaatattgaaatcttaatgtttagtatatccaaaatattaatgtttgatacatgaaaatggcattggtaaatttctcataatatttttttcttttttttcctgaaaataatagcgtgggctctgctttaatttaagaaatagtgcctagggtctttcaactagcaccacaaggtgtgggctagccaacccaggttcgagcctcacccctttcttaataaattttgatatgacaaccattactctcatatccaggggttctttttaaaactttggagctccccaaactgctttgtttgtccaatttcagacaggattcaccgaattttgctcaaaattcatgaaattcgtcatcttgctggggctcacttttgaccccacaacgaatttgtgagcaaaagcgatgactaagcaatagacacctaactgaattttgattttgctggagtcaattcacaaagaatattgaaacccaacaacattttcatttttcaacagactaagcaatagcacaacaacatagaacatcctcttgtattatgcttactaaccattaatggtcatggttattcctagtgtactcccaataatgcttcattattcagtagaatcaaatgaatgtgacacatatataggacttgaggtgagatggcaaagaattaaaagattagagatatgcaattaaccctagaattaaaagattagagatatgtaggtagtgtctttcataagacgttatccggagattttgagtttccaaaagtagatgttactcggtatgacacttggtgttggtgtttgagataggttaagatgaagatgaagttaggacatgcaaaacaagtaagcatttatcacttgattaattaagttttaattattataaaatagaaaaatggatatattttagattttaaagcaacttctacatagaaagtttttacataaaacgcactacataatagtttgaaatttgctttgcttccaaacaataaatctattccctactagtgcccttctaaagtatgcatttagtggatttgaattcaaaacatccgctactggtgcactttgcttccaaacaatgttataaagtattgggtattgctctttattataagtgttcgttgccccagccacacattctcctataaacgaatttgagttccggtttgcaagataaaagaacctaaatacaaaaactcttgtttgaccttcatcagtccagtccgaaagtgagtgtcaccaggtttcttatcaactttagtaattgttttgtctttgccggactcctttctcatttaggagtattaatttgaataaccactttctaagtaagcatttattctgcacatccaaatttaagatgctccaaccaccctgatctttgggagtgcaagaatgctccatttagatagtctaaacttctactccctccatctacttttgatggtcatatttctaaatctgaaaattttatttttgataggcatatttcaatccaacgacatatcctcttaatgattttcttggatttaatgcatgactctccattcttccaaacaagattggctatatgggcatcgagaaatgtaaatattaatgaattgtttgtttacaaggaataactagtagcatgtttaaatggatgataagtagaattatttatccttgatctgtgtgccaagatgaaatatgactatcaaaagtagatggagggagtatttatgtccgtcactctgcaaaaagaaaatcttaacttataataatctaactatttttaatataaagcaagcccctttgaaatctcaaagaaagacaacatttgttaattggtttgccataaaattcgttaaaatccgacatcaaaagaaagggtagtacggtagtactgtatatacggacaattcacaccaatcctattttagttgggacatttaaggatttgcggcttagaaatgaagggaattgattatttgccactcatttgtcaatgacatatgcaaccaggactcaaatgtcagtgagacatgaggaggaattttttttttctaattcttattctcatgtgacccaggagtgtcctgctgacatatacctacatcaaaatgttgtgattgcaggtacttgcttgttgtggatgatatatggagtgtaagtacctgggaaataatcaaatgtgctttgcccttgaatagtttggggtgcagaataattaccaccacgcgcattattgatgttgcgaaatcatgttgctctcatcggaatagttttatctactcagtgaaatctctcagcgtgatggactctagagtgttgttttacagaagaattttcgggtccgagagctgttgtccttcagatttggtagaagtttctgacagaatcttgaggaaatgttctggtttgccactggccataaccatcatatctagtttactggctagcaagccatgcttaagggaagaatggatgaaggtactttactcaattgatgatactcttgaaaggtctggttatgaaggaacgagaaggataatattcctctgttaccatgatcttccgatccatctcaagacctgccttttgtacctaggtatatttccagaggattatgtaatcgatcatgacagcatagtaaggagatggatagctgaaggattcatacccggaatgcaggggaaaactgctgaggaagtaggagggagttattttaacgaactcatcaacagaggcatgatccagcctatttgtgatagttatgatggtaaaccagggtcttgtcgaatccatgatctgatccttgacctaataatatccaagtcagtggaagagaattttatcaccttgttaggctatgaaagcgttggacctaagttatctagaaaagttcgccggttatccatcaaggataccaatgaagataaatgtattccagaaatgatggaccaatctcatatccgctcactatctatctttggcagggttggagcaagattttcctttcggaatttcattagtttgcgggtattggacttggaaggctgtaaggatttgaacaaccacgatatcatgaaaattgtgggatttcaccaattaagatacttaaacatccgagatacatccatcagtatactcccagatcaaattggcctgctaaaattcctgacactgctagatctccggaatacccaattacaagaattgcccgtgagtattgtacagctgcggaggttggcatatctgctttgtgacatcatgattttcccagagggtatagagaaaatggaagcactttcttgcctgtcagaggttgacatttcacagagcaaaatatctgttgttgaagaacttggtaatttgtctgaactgagaaagcttgtgatatggcagtatcgtgatatggaatctgacaatactatgagatatgagcgtttagcctcctctctttgcagattgtacaagctccaatctctgtgtatacatggcaactatggctctgtggacttcttggaccatgtgtatccccctctacacgaactgcagaggtttcagttgaacaaaaggtgttttttgagaaggataccagagtggttcagatctctttcaaacctcatctatgtgtgcattgatgtcgaggaagtaaagaatgaagacttgcagttgctctcagatttaccctcactttgctatctgtctctctcatccatatcaattactgcaaaagagctagtcatccgtcagaatgcattcccgtctctgcatgagttccacttggattctgcatggtcaaacttaacctttgaaccagaggctatgccgaagcttgagaagttggtgctgtcgttctatttccttgctgataagacacgtgattttgatttcagcattggaaggctcattcgcctcaagaaattttgcgccacaattcatgctaagagcgcagatgcttcccaaatcaatgctgtggagagtgccatcagatttgctgcagacagccatccaaaccgtcccatagtagacgtaataacactgcctgaacatggtggtgatgaaaaacttgaggaaaatgttgaggatgaaacaatgacagtggacaaataa

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CDS seq

atggagggtgctgagagtatcgccgttggagcgatgggatctgttatcccaaagctcggtgctttgctcaaagaggaacacaagctgacaaaggaggcgaggggtaagattatgttgctcataaaagatctcgagggccttcagcttttccttcggagaatgttcgaggtggaagatcctgacattccaatgaagcttatggcgagggacatccgggagctgtcatatgatttagaggacagcgtcgacgagttcttgatccgcgcggagaagggcgagctcggcctgaatccacgcggtttgaagcgtatgattaacaagataacgagagcccaacgccagcatggaattgccagccagatacaccaactgcaggcccgcgtcaatgaagtgagcgagcggagaaacaggtacatgattgacgaggccgtctccacggctagcagcagcgaggccgtctccatgcccatggtggtggtggatcctcgtctctatacggatgcgtcaagcacccttgtcggcctcgactgcccgcgggaggagatcaccaagctgctcatggaggaggacgaatccgagtcggcacttcagctttgcgtggcctgtattgttgggatgggaggtattggcaagaccactcttgccaatcaggtctaccaaacaatggcgtctgaattcgattgccgagcttgggtggcagtatcacatcacccaaatattaaaaggattcttagggatatacttggccaaattcaacaagtcaaccttaatgagtaccgagacacaatggatgagaggcttctcatcgatgcgatcagaagcgcgctacaagataaaaggtacttgcttgttgtggatgatatatggagtgtaagtacctgggaaataatcaaatgtgctttgcccttgaatagtttggggtgcagaataattaccaccacgcgcattattgatgttgcgaaatcatgttgctctcatcggaatagttttatctactcagtgaaatctctcagcgtgatggactctagagtgttgttttacagaagaattttcgggtccgagagctgttgtccttcagatttggtagaagtttctgacagaatcttgaggaaatgttctggtttgccactggccataaccatcatatctagtttactggctagcaagccatgcttaagggaagaatggatgaaggtactttactcaattgatgatactcttgaaaggtctggttatgaaggaacgagaaggataatattcctctgttaccatgatcttccgatccatctcaagacctgccttttgtacctaggtatatttccagaggattatgtaatcgatcatgacagcatagtaaggagatggatagctgaaggattcatacccggaatgcaggggaaaactgctgaggaagtaggagggagttattttaacgaactcatcaacagaggcatgatccagcctatttgtgatagttatgatggtaaaccagggtcttgtcgaatccatgatctgatccttgacctaataatatccaagtcagtggaagagaattttatcaccttgttaggctatgaaagcgttggacctaagttatctagaaaagttcgccggttatccatcaaggataccaatgaagataaatgtattccagaaatgatggaccaatctcatatccgctcactatctatctttggcagggttggagcaagattttcctttcggaatttcattagtttgcgggtattggacttggaaggctgtaaggatttgaacaaccacgatatcatgaaaattgtgggatttcaccaattaagatacttaaacatccgagatacatccatcagtatactcccagatcaaattggcctgctaaaattcctgacactgctagatctccggaatacccaattacaagaattgcccgtgagtattgtacagctgcggaggttggcatatctgctttgtgacatcatgattttcccagagggtatagagaaaatggaagcactttcttgcctgtcagaggttgacatttcacagagcaaaatatctgttgttgaagaacttggtaatttgtctgaactgagaaagcttgtgatatggcagtatcgtgatatggaatctgacaatactatgagatatgagcgtttagcctcctctctttgcagattgtacaagctccaatctctgtgtatacatggcaactatggctctgtggacttcttggaccatgtgtatccccctctacacgaactgcagaggtttcagttgaacaaaaggtgttttttgagaaggataccagagtggttcagatctctttcaaacctcatctatgtgtgcattgatgtcgaggaagtaaagaatgaagacttgcagttgctctcagatttaccctcactttgctatctgtctctctcatccatatcaattactgcaaaagagctagtcatccgtcagaatgcattcccgtctctgcatgagttccacttggattctgcatggtcaaacttaacctttgaaccagaggctatgccgaagcttgagaagttggtgctgtcgttctatttccttgctgataagacacgtgattttgatttcagcattggaaggctcattcgcctcaagaaattttgcgccacaattcatgctaagagcgcagatgcttcccaaatcaatgctgtggagagtgccatcagatttgctgcagacagccatccaaaccgtcccatagtagacgtaataacactgcctgaacatggtggtgatgaaaaacttgaggaaaatgttgaggatgaaacaatgacagtggacaaataa

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Protein seq

MEGAESIAVGAMGSVIPKLGALLKEEHKLTKEARGKIMLLIKDLEGLQLFLRRMFEVEDPDIPMKLMARDIRELSYDLEDSVDEFLIRAEKGELGLNPRGLKRMINKITRAQRQHGIASQIHQLQARVNEVSERRNRYMIDEAVSTASSSEAVSMPMVVVDPRLYTDASSTLVGLDCPREEITKLLMEEDESESALQLCVACIVGMGGIGKTTLANQVYQTMASEFDCRAWVAVSHHPNIKRILRDILGQIQQVNLNEYRDTMDERLLIDAIRSALQDKRYLLVVDDIWSVSTWEIIKCALPLNSLGCRIITTTRIIDVAKSCCSHRNSFIYSVKSLSVMDSRVLFYRRIFGSESCCPSDLVEVSDRILRKCSGLPLAITIISSLLASKPCLREEWMKVLYSIDDTLERSGYEGTRRIIFLCYHDLPIHLKTCLLYLGIFPEDYVIDHDSIVRRWIAEGFIPGMQGKTAEEVGGSYFNELINRGMIQPICDSYDGKPGSCRIHDLILDLIISKSVEENFITLLGYESVGPKLSRKVRRLSIKDTNEDKCIPEMMDQSHIRSLSIFGRVGARFSFRNFISLRVLDLEGCKDLNNHDIMKIVGFHQLRYLNIRDTSISILPDQIGLLKFLTLLDLRNTQLQELPVSIVQLRRLAYLLCDIMIFPEGIEKMEALSCLSEVDISQSKISVVEELGNLSELRKLVIWQYRDMESDNTMRYERLASSLCRLYKLQSLCIHGNYGSVDFLDHVYPPLHELQRFQLNKRCFLRRIPEWFRSLSNLIYVCIDVEEVKNEDLQLLSDLPSLCYLSLSSISITAKELVIRQNAFPSLHEFHLDSAWSNLTFEPEAMPKLEKLVLSFYFLADKTRDFDFSIGRLIRLKKFCATIHAKSADASQINAVESAIRFAADSHPNRPIVDVITLPEHGGDEKLEENVEDETMTVDK

Function Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_11g0020270 OsPr106_11g0020270.01 Chr11 26502113 26507425 + NAM
CDS seq

atggagggtgctgagagtatcgccgttggagcgatgggatctgttatcccaaagctcggtgctttgctcaaagaggaacacaagctgacaaaggaggcgaggggtaagattatgttgctcataaaagatctcgagggccttcagcttttccttcggagaatgttcgaggtggaagatcctgacattccaatgaagcttatggcgagggacatccgggagctgtcatatgatttagaggacagcgtcgacgagttcttgatccgcgcggagaagggcgagctcggcctgaatccacgcggtttgaagcgtatgattaacaagataacgagagcccaacgccagcatggaattgccagccagatacaccaactgcaggcccgcgtcaatgaagtgagcgagcggagaaacaggtacatgattgacgaggccgtctccacggctagcagcagcgaggccgtctccatgcccatggtggtggtggatcctcgtctctatacggatgcgtcaagcacccttgtcggcctcgactgcccgcgggaggagatcaccaagctgctcatggaggaggacgaatccgagtcggcacttcagctttgcgtggcctgtattgttgggatgggaggtattggcaagaccactcttgccaatcaggtctaccaaacaatggcgtctgaattcgattgccgagcttgggtggcagtatcacatcacccaaatattaaaaggattcttagggatatacttggccaaattcaacaagtcaaccttaatgagtaccgagacacaatggatgagaggcttctcatcgatgcgatcagaagcgcgctacaagataaaaggtacttgcttgttgtggatgatatatggagtgtaagtacctgggaaataatcaaatgtgctttgcccttgaatagtttggggtgcagaataattaccaccacgcgcattattgatgttgcgaaatcatgttgctctcatcggaatagttttatctactcagtgaaatctctcagcgtgatggactctagagtgttgttttacagaagaattttcgggtccgagagctgttgtccttcagatttggtagaagtttctgacagaatcttgaggaaatgttctggtttgccactggccataaccatcatatctagtttactggctagcaagccatgcttaagggaagaatggatgaaggtactttactcaattgatgatactcttgaaaggtctggttatgaaggaacgagaaggataatattcctctgttaccatgatcttccgatccatctcaagacctgccttttgtacctaggtatatttccagaggattatgtaatcgatcatgacagcatagtaaggagatggatagctgaaggattcatacccggaatgcaggggaaaactgctgaggaagtaggagggagttattttaacgaactcatcaacagaggcatgatccagcctatttgtgatagttatgatggtaaaccagggtcttgtcgaatccatgatctgatccttgacctaataatatccaagtcagtggaagagaattttatcaccttgttaggctatgaaagcgttggacctaagttatctagaaaagttcgccggttatccatcaaggataccaatgaagataaatgtattccagaaatgatggaccaatctcatatccgctcactatctatctttggcagggttggagcaagattttcctttcggaatttcattagtttgcgggtattggacttggaaggctgtaaggatttgaacaaccacgatatcatgaaaattgtgggatttcaccaattaagatacttaaacatccgagatacatccatcagtatactcccagatcaaattggcctgctaaaattcctgacactgctagatctccggaatacccaattacaagaattgcccgtgagtattgtacagctgcggaggttggcatatctgctttgtgacatcatgattttcccagagggtatagagaaaatggaagcactttcttgcctgtcagaggttgacatttcacagagcaaaatatctgttgttgaagaacttggtaatttgtctgaactgagaaagcttgtgatatggcagtatcgtgatatggaatctgacaatactatgagatatgagcgtttagcctcctctctttgcagattgtacaagctccaatctctgtgtatacatggcaactatggctctgtggacttcttggaccatgtgtatccccctctacacgaactgcagaggtttcagttgaacaaaaggtgttttttgagaaggataccagagtggttcagatctctttcaaacctcatctatgtgtgcattgatgtcgaggaagtaaagaatgaagacttgcagttgctctcagatttaccctcactttgctatctgtctctctcatccatatcaattactgcaaaagagctagtcatccgtcagaatgcattcccgtctctgcatgagttccacttggattctgcatggtcaaacttaacctttgaaccagaggctatgccgaagcttgagaagttggtgctgtcgttctatttccttgctgataagacacgtgattttgatttcagcattggaaggctcattcgcctcaagaaattttgcgccacaattcatgctaagagcgcagatgcttcccaaatcaatgctgtggagagtgccatcagatttgctgcagacagccatccaaaccgtcccatagtagacgtaataacactgcctgaacatggtggtgatgaaaaacttgaggaaaatgttgaggatgaaacaatgacagtggacaaataa

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Protein seq

MEGAESIAVGAMGSVIPKLGALLKEEHKLTKEARGKIMLLIKDLEGLQLFLRRMFEVEDPDIPMKLMARDIRELSYDLEDSVDEFLIRAEKGELGLNPRGLKRMINKITRAQRQHGIASQIHQLQARVNEVSERRNRYMIDEAVSTASSSEAVSMPMVVVDPRLYTDASSTLVGLDCPREEITKLLMEEDESESALQLCVACIVGMGGIGKTTLANQVYQTMASEFDCRAWVAVSHHPNIKRILRDILGQIQQVNLNEYRDTMDERLLIDAIRSALQDKRYLLVVDDIWSVSTWEIIKCALPLNSLGCRIITTTRIIDVAKSCCSHRNSFIYSVKSLSVMDSRVLFYRRIFGSESCCPSDLVEVSDRILRKCSGLPLAITIISSLLASKPCLREEWMKVLYSIDDTLERSGYEGTRRIIFLCYHDLPIHLKTCLLYLGIFPEDYVIDHDSIVRRWIAEGFIPGMQGKTAEEVGGSYFNELINRGMIQPICDSYDGKPGSCRIHDLILDLIISKSVEENFITLLGYESVGPKLSRKVRRLSIKDTNEDKCIPEMMDQSHIRSLSIFGRVGARFSFRNFISLRVLDLEGCKDLNNHDIMKIVGFHQLRYLNIRDTSISILPDQIGLLKFLTLLDLRNTQLQELPVSIVQLRRLAYLLCDIMIFPEGIEKMEALSCLSEVDISQSKISVVEELGNLSELRKLVIWQYRDMESDNTMRYERLASSLCRLYKLQSLCIHGNYGSVDFLDHVYPPLHELQRFQLNKRCFLRRIPEWFRSLSNLIYVCIDVEEVKNEDLQLLSDLPSLCYLSLSSISITAKELVIRQNAFPSLHEFHLDSAWSNLTFEPEAMPKLEKLVLSFYFLADKTRDFDFSIGRLIRLKKFCATIHAKSADASQINAVESAIRFAADSHPNRPIVDVITLPEHGGDEKLEENVEDETMTVDK

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 4.232135 14.141755 11.280486

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0629550 SBH 1.040273 0.545325 0.985531
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g34920 SBH 0.083556 0.257411 0.523092
Nipponbare | IRGSP 1.0 | RAP-db Os11g0629550 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0017100 SBH 0.067945 1.407796 0.567068
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0020420 RBH 0.494679 5.150440 2.032849
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0020210 RBH 2.072987 12.964246 6.469787
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0019760 RBH 0.317942 0.425438 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0019780 SBH 0.000000 13.340145 5.072038
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0361500 RBH 0.004226 0.231944 0.016073
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0020750 RBH 0.337773 0.932421 1.350488
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0378800 RBH 7.72216 16.8049975 14.262526
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0020560 RBH 0.371077 0.319563 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0020710 RBH 1.113080 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0020210 RBH 4.664815 58.803665 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0020010 RBH 0.956146 0.0 1.243245
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0020120 RBH 0.075574 2.999010 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G020120 RBH 0.166791 7.239576 1.673717
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0020500 RBH 0.278330 13.526529 5.388376
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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