Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_10g0013950 OGI:10040130 | 16/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr10:19170024-19173148
Gene Symbol -
DNA seq

tcaatttgcataacttctttctatgtgatcgacaaaatgaaaaacaaaaactcttaatggcttaagtaaaagtatagctccaaaccaaagccaaaatccgaaaacaataccaagaattacagagtaaaataagcatatatcaagttcttcatgatcttcatttctctcatccaatctagatgcctggcaggctattctcaaagggaagccacaaaggcccaaattgttgctatatattgagggatccacaaatgtctgaagttgtcttccggtgggtatgcttccccataagcggttatttgagagatttaacacactgaggcatgatagatttgcaatggttgtagggataacacctgaaagctcattccatgataagtcaagggattccaagatattcaaattgccaattctttctggaatactgcctgaaagatcattccttgacaagtttagataccggaggccctgaaggtatgttagctcttttgggatttcaccgtaaagtgaattgcttgataaatcaattcctgtcattaacatagctgttccttgaaaagtttcttcatgtcccttccataatatgctaaatctgtctCcagactgatcaagaaggaacggataattgtatcctcttgtaggatacctggaagtctggtgtacttctggctgagaaggggcacttttcccattaaaagtcccacttgtgggcaaggtttttgcttgtttcatggatgataagttgccaaaagttgttgggatgaatccagttaacccattgctggccaaatcaagaagttgaagctgagaaagttgggataattctgtgggaatctctccactgaaattatttgatcggaggataagaattcttaggacaggaagactagttcctatccaagagggaatcttgccgaagaacttgttgctccacatatcaagcgtaacaagtgctctgcagttacgaatggtggctgggaaaactccagagaaactattgttagcaagatgcagagattggagaggaagttcagggctTCttgatgctggcaattcacccgagaagccgttgccagagacgtccataaacagcaaagcttgcaactcccaccaacaccttgggagctcaccactgaatcggttatttgatagatctaataattgaagagaggatagtctacagaaggaggaatcaaggttgccagatatgctgttaccgttgatagacagataggtgaggttgatgcaatttccccagtcagacgatagccgaccggtgagcttgctcccagatatgtccaagtattccaagctggggtgtatgccgaaggcatctgagatgtcgccggtgaagtggttcccgtccagccgcacccggtataggcttgtgcagttcttcagacatggcggtagcgtgccgctgaagttgttgtggttcaccgtgaagcgctccagcgcgaagccgtcgcagatgtggcgcggcagctcaccggagaagctgttgttggtgaagctcacgtgctgcaaggctatgcccttgccgaggtccgacgggatggtgccactcatgtagttgttgaacacagagaggtactgaaggttcctgagggacgagatggtggcagggagctcgccttgtagacggttggtgttgacgtccaacctttgcaacgctgtcatgttgccaatctcaggtgggatcgcgccggtgaggttgttgaagaacaacgccagcaccgtaagctgcttgaggttgccgattgagctagggatctccccggtgagcgagttatccgacaaatccagctgttccaggttctccaactcgccgagctctgccgggatggagccggtaaggttgttgctgaacaggtaaaggattttcagtttgctcgccatgccgacctcttttggaatcctgccagtgaagaagttgtactgtacttggaacgatatgagctcggaccagcttgtgaacaacaccgaagggatctcaccggtgagcccgttcatttcaagtccgaactcccgcattgcgcacatcccggcgaatgccgggggcaagccaccggagagatggttcacggatatctctagaaaagtgagattcttaagatttcccagctccggcggcagagttgaaacaagcccagcgttctttatcttgagccgctgcagcatctggagctggccaagaaccggcgggatcgccccgccgagctggttgtcaccaagttcgagaatcctcaactgtgacatcgacccaaggaactctgggacgccgccggtgagattgttggcggcaatcagcaggtcctggagtttcgttaacctcctgaggacgctggaatccggccagagaattcattgttggacaagttgaggtacatcagattcgggagcttctccggcagtgtgtccggcatcagcccgaacagagtattctgcgacaagtcgaggtaggtgatgttgccgctcttgaggatgaagtccgggaagctgccattgatggagttGTCgtagagcgacatgaatgtcacggtgggcatcggcgagaacttggcgaagtcctggtcggtcaggtagtttgctcccaggtcgaagtgggcaatcttggggagtcggctgagctggtgcgggatggcgccaacgaggttgttgttgtagaggcagaggtcgacgaggccggagaggtggccgatctgcggcgggatggagccgttgaacccgttgtcgccgaggtcgagcgaggcaagggagcgaagttgcgagatgccggccgggatgtcgccggcgaagctgttcccgttgaggtcgagctcggtgagcgccgggaacgcggcgaagtcgagctcgagcgtgtggaggccgccgccgagtcccagtccccggaggcgcagcgtcgtgacgcggccgccggcggcggcgtcgcagcccacgccgcgccaggtgcagaccggcgtagcccgcgtccagccggacagcgcggccgggccagcaaggctcgacttccatgccagtagcgcgtcggtctgctgtgacgatgctgcggcattgactgatcctgggatggcagcggtcgccacgaggaagaggaggaagaaagagtgcacgacgggggccat

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CDS seq

atggcccccgtcgtgcactctttcttcctcctcttcctcgtggcgaccgctgccatcccaggatcagtcaatgccgcagcatcgtcacagcagaccgacgcgctactggcatggaagtcgagccttgctggcccggccgcgctgtccggctggacgcgggctacgccggtctgcacctggcgcggcgtgggctgcgacgccgccgccggcggccgcgtcacgacgctgcgcctccggggactgggactcggcggcggcctccacacgctcgagctcgacttcgccgcgttcccggcgctcaccgagctcgacctcaacgggaacagcttcgccggcgacatcccggccggcatctcgcaacttcgctcccttgcctcgctcgacctcggcgacaacgggttcaacggctccatcccgccgcagatcggccacctctccggcctcgtcgacctctgcctctacaacaacaacctcgttggcgccatcccgcaccagctcagccgactccccaagattgcccacttcgacctgggagcaaactacctgaccgaccaggacttcgccaagttctcgccgatgcccaccgtgacattcatgtcgctctacGACaactccatcaatggcagcttcccggacttcatcctcaagagcggcaacatcacctacctcgacttgtcgcagaatactctgttcgggctgatgccggacacactgccggagaagctcccgaatctgatcgtcctcaggaggttaacgaaactccaggacctgctgattgccgccaacaatctcaccggcggcgtcccagagttccttgggtcgatgtcacagttgaggattctcgaacttggtgacaaccagctcggcggggcgatcccgccggttcttggccagctccagatgctgcagcggctcaagataaagaacgctgggcttgtttcaactctgccgccggagctgggaaatcttaagaatctcacttttctagagatatccgtgaaccatctctccggtggcttgcccccggcattcgccgggatgtgcgcaatgcgggagttcggacttgaaatgaacgggctcaccggtgagatcccttcggtgttgttcacaagctggtccgagctcatatcgttccaagtacagtacaacttcttcactggcaggattccaaaagaggtcggcatggcgagcaaactgaaaatcctttacctgttcagcaacaaccttaccggctccatcccggcagagctcggcgagttggagaacctggaacagctggatttgtcggataactcgctcaccggggagatccctagctcaatcggcaacctcaagcagcttacggtgctggcgttgttcttcaacaacctcaccggcgcgatcccacctgagattggcaacatgacagcgttgcaaaggttggacgtcaacaccaaccgtctacaaggcgagctccctgccaccatctcgtccctcaggaaccttcagtacctctctgtgttcaacaactacatgagtggcaccatcccgtcggacctcggcaagggcatagccttgcagcacgtgagcttcaccaacaacagcttctccgccaccattcgtaactgcagagcacttgttacgcttgatatgtggagcaacaagttcttcggcaagattccctcttggataggaactagtcttcctgtcctaagaattcttatcctccgatcaaataatttcagtggagagattcccacagaattatcccaactttctcagcttcaacttcttgatttggccagcaatgggttaactggattcatcccaacaacttttggcaacttatcatccatgaaacaagcaaaaaccttgcccacaagtgggacttttaatgggaaaagtgccccttctcagccagaagtacaccagacttccaggtatcctacaagaggatacaattatccgttccttcttgatcagtctgGagacagatttagcatattatggaagggacatgaagaaacttttcaaggaacagctatgttaatgacaggaattgatttatcaagcaattcactttacggtgaaatcccaaaagagctaacataccttcagggcctccggtatctaaacttgtcaaggaatgatctttcaggcagtattccagaaagaattggcaatttgaatatcttggaatcccttgacttatcatggaatgagctttcaggtgttatccctacaaccattgcaaatctatcatgcctcagtgtgttaaatctctcaaataaccgcttatggggaagcatacccaccggaagacaacttcagacatttgtggatccctcaatatatagcaacaatttgggcctttgtggcttccctttgagaatagcctgccaggcatctagattggatgagagaaatgaagatcatgaagaacttgatatatgcttattttactctgtaattcttggtattgttttcggattttggctttggtttggagctatacttttacttaagccattaagagtttttgtttttcattttgtcgatcacatagaaagaagttatgcaaattga

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Protein seq

MAPVVHSFFLLFLVATAAIPGSVNAAASSQQTDALLAWKSSLAGPAALSGWTRATPVCTWRGVGCDAAAGGRVTTLRLRGLGLGGGLHTLELDFAAFPALTELDLNGNSFAGDIPAGISQLRSLASLDLGDNGFNGSIPPQIGHLSGLVDLCLYNNNLVGAIPHQLSRLPKIAHFDLGANYLTDQDFAKFSPMPTVTFMSLYDNSINGSFPDFILKSGNITYLDLSQNTLFGLMPDTLPEKLPNLIVLRRLTKLQDLLIAANNLTGGVPEFLGSMSQLRILELGDNQLGGAIPPVLGQLQMLQRLKIKNAGLVSTLPPELGNLKNLTFLEISVNHLSGGLPPAFAGMCAMREFGLEMNGLTGEIPSVLFTSWSELISFQVQYNFFTGRIPKEVGMASKLKILYLFSNNLTGSIPAELGELENLEQLDLSDNSLTGEIPSSIGNLKQLTVLALFFNNLTGAIPPEIGNMTALQRLDVNTNRLQGELPATISSLRNLQYLSVFNNYMSGTIPSDLGKGIALQHVSFTNNSFSATIRNCRALVTLDMWSNKFFGKIPSWIGTSLPVLRILILRSNNFSGEIPTELSQLSQLQLLDLASNGLTGFIPTTFGNLSSMKQAKTLPTSGTFNGKSAPSQPEVHQTSRYPTRGYNYPFLLDQSGDRFSILWKGHEETFQGTAMLMTGIDLSSNSLYGEIPKELTYLQGLRYLNLSRNDLSGSIPERIGNLNILESLDLSWNELSGVIPTTIANLSCLSVLNLSNNRLWGSIPTGRQLQTFVDPSIYSNNLGLCGFPLRIACQASRLDERNEDHEELDICLFYSVILGIVFGFWLWFGAILLLKPLRVFVFHFVDHIERSYAN

Function Probable leucine-rich repeat receptor-like protein kinase At1g35710 [UniProtKB/Swiss-Prot:Q9LP24]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_10g0013950 OsPr106_10g0013950.01 Chr10 19170024 19173148 - NAM
CDS seq

atggcccccgtcgtgcactctttcttcctcctcttcctcgtggcgaccgctgccatcccaggatcagtcaatgccgcagcatcgtcacagcagaccgacgcgctactggcatggaagtcgagccttgctggcccggccgcgctgtccggctggacgcgggctacgccggtctgcacctggcgcggcgtgggctgcgacgccgccgccggcggccgcgtcacgacgctgcgcctccggggactgggactcggcggcggcctccacacgctcgagctcgacttcgccgcgttcccggcgctcaccgagctcgacctcaacgggaacagcttcgccggcgacatcccggccggcatctcgcaacttcgctcccttgcctcgctcgacctcggcgacaacgggttcaacggctccatcccgccgcagatcggccacctctccggcctcgtcgacctctgcctctacaacaacaacctcgttggcgccatcccgcaccagctcagccgactccccaagattgcccacttcgacctgggagcaaactacctgaccgaccaggacttcgccaagttctcgccgatgcccaccgtgacattcatgtcgctctacGACaactccatcaatggcagcttcccggacttcatcctcaagagcggcaacatcacctacctcgacttgtcgcagaatactctgttcgggctgatgccggacacactgccggagaagctcccgaatctgatcgtcctcaggaggttaacgaaactccaggacctgctgattgccgccaacaatctcaccggcggcgtcccagagttccttgggtcgatgtcacagttgaggattctcgaacttggtgacaaccagctcggcggggcgatcccgccggttcttggccagctccagatgctgcagcggctcaagataaagaacgctgggcttgtttcaactctgccgccggagctgggaaatcttaagaatctcacttttctagagatatccgtgaaccatctctccggtggcttgcccccggcattcgccgggatgtgcgcaatgcgggagttcggacttgaaatgaacgggctcaccggtgagatcccttcggtgttgttcacaagctggtccgagctcatatcgttccaagtacagtacaacttcttcactggcaggattccaaaagaggtcggcatggcgagcaaactgaaaatcctttacctgttcagcaacaaccttaccggctccatcccggcagagctcggcgagttggagaacctggaacagctggatttgtcggataactcgctcaccggggagatccctagctcaatcggcaacctcaagcagcttacggtgctggcgttgttcttcaacaacctcaccggcgcgatcccacctgagattggcaacatgacagcgttgcaaaggttggacgtcaacaccaaccgtctacaaggcgagctccctgccaccatctcgtccctcaggaaccttcagtacctctctgtgttcaacaactacatgagtggcaccatcccgtcggacctcggcaagggcatagccttgcagcacgtgagcttcaccaacaacagcttctccgccaccattcgtaactgcagagcacttgttacgcttgatatgtggagcaacaagttcttcggcaagattccctcttggataggaactagtcttcctgtcctaagaattcttatcctccgatcaaataatttcagtggagagattcccacagaattatcccaactttctcagcttcaacttcttgatttggccagcaatgggttaactggattcatcccaacaacttttggcaacttatcatccatgaaacaagcaaaaaccttgcccacaagtgggacttttaatgggaaaagtgccccttctcagccagaagtacaccagacttccaggtatcctacaagaggatacaattatccgttccttcttgatcagtctgGagacagatttagcatattatggaagggacatgaagaaacttttcaaggaacagctatgttaatgacaggaattgatttatcaagcaattcactttacggtgaaatcccaaaagagctaacataccttcagggcctccggtatctaaacttgtcaaggaatgatctttcaggcagtattccagaaagaattggcaatttgaatatcttggaatcccttgacttatcatggaatgagctttcaggtgttatccctacaaccattgcaaatctatcatgcctcagtgtgttaaatctctcaaataaccgcttatggggaagcatacccaccggaagacaacttcagacatttgtggatccctcaatatatagcaacaatttgggcctttgtggcttccctttgagaatagcctgccaggcatctagattggatgagagaaatgaagatcatgaagaacttgatatatgcttattttactctgtaattcttggtattgttttcggattttggctttggtttggagctatacttttacttaagccattaagagtttttgtttttcattttgtcgatcacatagaaagaagttatgcaaattga

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Protein seq

MAPVVHSFFLLFLVATAAIPGSVNAAASSQQTDALLAWKSSLAGPAALSGWTRATPVCTWRGVGCDAAAGGRVTTLRLRGLGLGGGLHTLELDFAAFPALTELDLNGNSFAGDIPAGISQLRSLASLDLGDNGFNGSIPPQIGHLSGLVDLCLYNNNLVGAIPHQLSRLPKIAHFDLGANYLTDQDFAKFSPMPTVTFMSLYDNSINGSFPDFILKSGNITYLDLSQNTLFGLMPDTLPEKLPNLIVLRRLTKLQDLLIAANNLTGGVPEFLGSMSQLRILELGDNQLGGAIPPVLGQLQMLQRLKIKNAGLVSTLPPELGNLKNLTFLEISVNHLSGGLPPAFAGMCAMREFGLEMNGLTGEIPSVLFTSWSELISFQVQYNFFTGRIPKEVGMASKLKILYLFSNNLTGSIPAELGELENLEQLDLSDNSLTGEIPSSIGNLKQLTVLALFFNNLTGAIPPEIGNMTALQRLDVNTNRLQGELPATISSLRNLQYLSVFNNYMSGTIPSDLGKGIALQHVSFTNNSFSATIRNCRALVTLDMWSNKFFGKIPSWIGTSLPVLRILILRSNNFSGEIPTELSQLSQLQLLDLASNGLTGFIPTTFGNLSSMKQAKTLPTSGTFNGKSAPSQPEVHQTSRYPTRGYNYPFLLDQSGDRFSILWKGHEETFQGTAMLMTGIDLSSNSLYGEIPKELTYLQGLRYLNLSRNDLSGSIPERIGNLNILESLDLSWNELSGVIPTTIANLSCLSVLNLSNNRLWGSIPTGRQLQTFVDPSIYSNNLGLCGFPLRIACQASRLDERNEDHEELDICLFYSVILGIVFGFWLWFGAILLLKPLRVFVFHFVDHIERSYAN

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.0 1.085973

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_10g0469300 SBH 0.619946 0.238908 1.264214
Nipponbare | IRGSP 1.0 | MSU LOC_Os10g33130 SBH 0.532318 0.281205 0.018365
Nipponbare | IRGSP 1.0 | RAP-db Os10g0469300 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_10g0014030 SBH 0.062084 0.0 0.621771
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_10g0014240 SBH 0.002502 0.249035 0.624191
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_10g0013750 RBH 0.164190 0.0 1.074878
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_10g0014060 SBH 0.000000 0.089605 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0003480 SBH 0.755517 47.820488 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_10G0288600 SBH 0.936499 2.2112275 2.144864
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_10g0013970 RBH 0.122164 0.061764 0.087198
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_10G0310300 SBH 0.5951745 0.3719285 0.127059
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_10g0013710 SBH 0.014096 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_10g0013590 SBH 0.042996 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_10g0013970 RBH 0.000000 2.088720 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_10g0013680 RBH 0.204175 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_10g0014220 RBH 0.000000 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_10G013900 SBH 0.0 0.476957 0.127443
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_10g0013840 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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