Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_10G0288600 | OGI:10040130 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr10:19265443-19266273 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAACCTCCTGAGGACGCTGGAATCCGGCCAGAGAATTCATTGTTGGACAAGTTGAGGTACATCAGATTCGGGAGCTTCTCCGGCAGTGTGTCCGGCATCAGCCCGAACAGAGTATTCTGCGACAAGTCGAGGTAGGTGATGTTGCCGCTCTTGAGGATGAAGTCCGGGAAGCTGCCATTGATGGAGTTGTCGTAGAGCGACATGAATGTCACGGTGGGCATCGGCGAGAACTTGGCGAAGTCCTGGTCGGTCAGGTAGTTTGCTCCCAGGTCGAAGTGGGCAATCTTGGGGAGTCGGCTGAGCTGGTGCGGGATGGCGCCAACGAGGTTGTTGTTGTAGAGGCAGAGGTCGACGAGGCCGGAGAGGTGGCCGATCTGCGGCGGGATGGAGCCGTTGAACCCGTTGTCGCCGAGGTCGAGCGAGGCAAGGGAGCGAAGTTGCGAGATGCCGGCCGGGATGTCGCCGGCGAAGCTGTTCCCGTTGAGGTCGAGCTCGGTGAGCGCCGGGAACGCGGCGAAGTCGAGCTCGAGCGTGTGGAGGCCGCCGCCGAGTCCCAGTCCCCGGAGGCGCAGCGTCGTGACGCGGCCGCCGGCGGCGGCGTCGCAGCCCACGCCGCGCCAGGTGCAGACCGGCGTAGCCCGCGTCCAGCCGGACAGCGCGGCCGGGCCAGCAAGGCTCGACTTCCATGCCAGTAGCGCGTCGGTCTGCTGTGACGATGCTGCGGCATTGACTGATCCTGGGATGGCAGCGGTCGCCACGAGGAAGAGGAGGAAGAAAGAGTGCACGACGGGGGCCATGCGGAGTAAAACACCAACGCAGTTATCCCGCAT
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| CDS seq | ATGCGGGATAACTGCGTTGGTGTTTTACTCCGCATGGCCCCCGTCGTGCACTCTTTCTTCCTCCTCTTCCTCGTGGCGACCGCTGCCATCCCAGGATCAGTCAATGCCGCAGCATCGTCACAGCAGACCGACGCGCTACTGGCATGGAAGTCGAGCCTTGCTGGCCCGGCCGCGCTGTCCGGCTGGACGCGGGCTACGCCGGTCTGCACCTGGCGCGGCGTGGGCTGCGACGCCGCCGCCGGCGGCCGCGTCACGACGCTGCGCCTCCGGGGACTGGGACTCGGCGGCGGCCTCCACACGCTCGAGCTCGACTTCGCCGCGTTCCCGGCGCTCACCGAGCTCGACCTCAACGGGAACAGCTTCGCCGGCGACATCCCGGCCGGCATCTCGCAACTTCGCTCCCTTGCCTCGCTCGACCTCGGCGACAACGGGTTCAACGGCTCCATCCCGCCGCAGATCGGCCACCTCTCCGGCCTCGTCGACCTCTGCCTCTACAACAACAACCTCGTTGGCGCCATCCCGCACCAGCTCAGCCGACTCCCCAAGATTGCCCACTTCGACCTGGGAGCAAACTACCTGACCGACCAGGACTTCGCCAAGTTCTCGCCGATGCCCACCGTGACATTCATGTCGCTCTACGACAACTCCATCAATGGCAGCTTCCCGGACTTCATCCTCAAGAGCGGCAACATCACCTACCTCGACTTGTCGCAGAATACTCTGTTCGGGCTGATGCCGGACACACTGCCGGAGAAGCTCCCGAATCTGATGTACCTCAACTTGTCCAACAATGAATTCTCTGGCCGGATTCCAGCGTCCTCAGGAGGTTAA
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| Protein seq | MRDNCVGVLLRMAPVVHSFFLLFLVATAAIPGSVNAAASSQQTDALLAWKSSLAGPAALSGWTRATPVCTWRGVGCDAAAGGRVTTLRLRGLGLGGGLHTLELDFAAFPALTELDLNGNSFAGDIPAGISQLRSLASLDLGDNGFNGSIPPQIGHLSGLVDLCLYNNNLVGAIPHQLSRLPKIAHFDLGANYLTDQDFAKFSPMPTVTFMSLYDNSINGSFPDFILKSGNITYLDLSQNTLFGLMPDTLPEKLPNLMYLNLSNNEFSGRIPASSGG |
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| Function | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 [UniProtKB/Swiss-Prot:Q9M2Z1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_10G0288600 | OsMH63_10T0288600.1 | Chr10 | 19265443 | 19266273 | - | maker | ||
| CDS seq | ATGCGGGATAACTGCGTTGGTGTTTTACTCCGCATGGCCCCCGTCGTGCACTCTTTCTTCCTCCTCTTCCTCGTGGCGACCGCTGCCATCCCAGGATCAGTCAATGCCGCAGCATCGTCACAGCAGACCGACGCGCTACTGGCATGGAAGTCGAGCCTTGCTGGCCCGGCCGCGCTGTCCGGCTGGACGCGGGCTACGCCGGTCTGCACCTGGCGCGGCGTGGGCTGCGACGCCGCCGCCGGCGGCCGCGTCACGACGCTGCGCCTCCGGGGACTGGGACTCGGCGGCGGCCTCCACACGCTCGAGCTCGACTTCGCCGCGTTCCCGGCGCTCACCGAGCTCGACCTCAACGGGAACAGCTTCGCCGGCGACATCCCGGCCGGCATCTCGCAACTTCGCTCCCTTGCCTCGCTCGACCTCGGCGACAACGGGTTCAACGGCTCCATCCCGCCGCAGATCGGCCACCTCTCCGGCCTCGTCGACCTCTGCCTCTACAACAACAACCTCGTTGGCGCCATCCCGCACCAGCTCAGCCGACTCCCCAAGATTGCCCACTTCGACCTGGGAGCAAACTACCTGACCGACCAGGACTTCGCCAAGTTCTCGCCGATGCCCACCGTGACATTCATGTCGCTCTACGACAACTCCATCAATGGCAGCTTCCCGGACTTCATCCTCAAGAGCGGCAACATCACCTACCTCGACTTGTCGCAGAATACTCTGTTCGGGCTGATGCCGGACACACTGCCGGAGAAGCTCCCGAATCTGATGTACCTCAACTTGTCCAACAATGAATTCTCTGGCCGGATTCCAGCGTCCTCAGGAGGTTAA
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| Protein seq | MRDNCVGVLLRMAPVVHSFFLLFLVATAAIPGSVNAAASSQQTDALLAWKSSLAGPAALSGWTRATPVCTWRGVGCDAAAGGRVTTLRLRGLGLGGGLHTLELDFAAFPALTELDLNGNSFAGDIPAGISQLRSLASLDLGDNGFNGSIPPQIGHLSGLVDLCLYNNNLVGAIPHQLSRLPKIAHFDLGANYLTDQDFAKFSPMPTVTFMSLYDNSINGSFPDFILKSGNITYLDLSQNTLFGLMPDTLPEKLPNLMYLNLSNNEFSGRIPASSGG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.936499 | 2.2112275 | 2.144864 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0469300 | RBH | 0.619946 | 0.238908 | 1.264214 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g33130 | RBH | 0.532318 | 0.281205 | 0.018365 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0469300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0014000 | RBH | 0.000000 | 1.451824 | 1.570077 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0014210 | RBH | 0.0 | 0.598944 | 0.335457 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0013710 | RBH | 0.0 | 6.074656 | 0.503720 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0014060 | SBH | 0.000000 | 0.089605 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0013910 | RBH | 0.181931 | 21.960766 | 0.247718 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0288200 | RBH | 0.206522 | 0.1941475 | 0.110919 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0013970 | RBH | 0.122164 | 0.061764 | 0.087198 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0309500 | RBH | 0.2638425 | 0.0880635 | 0.6290745 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0013710 | SBH | 0.014096 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0013590 | SBH | 0.042996 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0013970 | SBH | 0.000000 | 2.088720 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0013680 | RBH | 0.204175 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0014220 | SBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G013900 | SBH | 0.0 | 0.476957 | 0.127443 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0013840 | SBH | 0.0 | 0.0 | 0.0 |
