Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_09g0008900 | OGI:09038320 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr09:14097694-14102706 | ||||||||
| Gene Symbol | MAPK | ||||||||||
| DNA seq | atgcgacgggacgacgccggcgggggagggttcggcgacctgttcgactccgtgcgccggtccatcgccttccgcaccagcacggccccggagacgccggggcctctcgggggcgggggcgggatcggggtacggatcagctcgtgcctccggaagtcgagggggatgggtctgctcgggctcatctccaagagcccctcgccgccgcgccgcctgctgccgccggcgcccgagttcagcggtggcggtggcggcgggggaaggggagggggagggggagaggagagcccgcagatccggtggcgtaagggcgagctgatcgggagcggcgcgttcgggcaggtctacctcgggatgaacctggacaccggagaactcctcgcagtaaagcaggtgaggcgggcttgcgacggtgggattttggtttaatttgtttggagttttggtggtattcggcatatcgatttacctctttcctatggtttgtttgttccaggttttgattgggagcaacaatgcgacgcgggagaaagcccaggtgagcagctttcatccaaccccctttcgtttgtctagagaaagaagaggaaaatcgagggctaatattgacatggagtaatccgtggtattggtcttttggtcaggcgcacataagagagctcgaggaagaagtgaagctacttaagaacctgtcacatcccaacattgttgtgagtggattcaatatggatcgcaatttttttttaaaggaaattccatgatattatcgtttgatctaatttctttctgtggtttgagaagcggtaccttgggacagtccgggaggaagatactctgaatattttgctcgagttcgtgccaggaggttccattcagtctctccttgggaaactaggttcatttccggaggcagtaagtatcatcaaatctgtgtgatttgcaaattgggtgatttcattctggaaaacaaactgatcccttctatcaactaatcaggtcattagaaagtacacaaagcaaattttgcaagggttggagtatttgcataacaatgcaataatacatagagacataaaggtactcaaaatctgaattctgaacacacaataatatgtatttattttaccacttgttgtgctcattatgattattcctgttatttgtcaaattccagggagcgaacattcttgttgataacaaaggatgcattaaacttgctgattttggggcatctaagcaagtggcaaagttggtaagattgaaaaaactttgttcaatgtgttattaaggtcaagcataatccaaagaactcatgctgtctcatctgttattcataaatctaccctgtctaatcacaccattagtcatcgtactaaatcactagtctgggttggggcaacatggaagtgtgagtttggtccatggctctatgcaaatttacattcctggagtaataaggcatttgctgcacaacttgcagcgtgtacagtcacaaaaaagaacatgcacatgatgaaagaggaaacagcataagctaatattgtgcctttagagtatttctacttgtgaaatgtaatagttttatagggccatggctaaaagtttgcacaggaaaacatggctacaggagcaagcccccacatcaaagcatgggactaggatgcttggacattgaattatatgactatttaataatataaagtaagctgttaatatgcaactgttgtggtctatttcattgtagatggtacctatttaaaatcagattttctaattctagtgaccttacccatgtttataaattgctcaatgcccatgcatatcttgctcattgttagtcattttggaagtttcagatattggtggatggccccttattgataagttgttacatgatatcatgttggaagttcaaccttttatttcgccgtgtattaactttaccaacaaatctaagtggtgctttcatgaaaagacgcttaacatgcaccatacatcgttatgctttcttatcataattgtgtacaagatatctgcctgctgcacttttacttaggttctacaattttgaactatcccataccaatgcacctgacaatgtttcatgctgtcaggctactatcacagccgctaaaacaatgaaagggacacctcactggatggcacctgaagtcattgttgggagtgggcataacttgtaagtggagaaactcttccggacttccagtcccattccttttccagtctgtataagacccaaaattctctctctctctttctctctgtgtgtgcgcgcgcgctcctcctatctctctgttgtagcagtcaatctcagttataatcgtccctgtttgcattacttaaagaactggcactcataataagatgctttgttacaaagtgaaagtgcaattttaaagcaaatggtgagcctgatttgaaaatatccattaatacttgaacttttttactccctccgtcccaaattatacagcgccctcttaaagtcaaactcggtaactttggctaataatcatagtatcatactaactatatatatgctaagtattatgcatgcaatatcactatattcatattttaaagtatttttatgtgatgctaatttcatatttgttgggaacataaaatggaataaattaatggtcaaagtatgttatttaagaccatataaaaaatataggccttataatttgggacagagggagtaatatttatgctatattgattttgggagagcagaaagcactaaaaagtaaaaattgctagatatgctttctgaactacataattatgctagcatgagttgaaaatcacatttagtctcattttgtataacaagttgagcaaacttgatcacatttagctactttttatatactcgcatatatttttttgtattcaactgatacagatatctaaatttgtaccaaggaaggaagtaaaacattattgttattcttaaaagctatttcagtatcatgttatttttctatttgttcttactttttagctgatccgtactatccatcctctcagctctgcagacatctggagtgtgggatgcacagttattgaaatggctactggtaaaccaccatggagccagcagtaccaggaggtaagttttaatgatatcaggccctacataagatgaaacttgtgttagttgttaacctaacaagctctttttaggttgcccttctatttcatgtcggaaccacaaagtcacacccgcctatacctgaacatctctcccccgaggccaaagattttctgctaaaatgcctgcagaagtaagctatgttctcacctcttagctaatattttgtccaaaagtttttgcaattaaaaaaaatagttcctgaatgttttgctctggtggcttgattatttctttcttctttcagagaaccagagttgagatcgacagcatcagatttattgaaggtatatttgtttgctgcagtgtagctggtgttttttttatgtgtttgtaagggtaaggtgatgttgctatttattaaaatatgacaccttcaacattttcttgcagcacccatttgttacaggagaatcggagaacctgcagccactcaattgtgctgcacagcaggttgattcctagcataatctgatgttacttcacccacccatttgtttgatttaataacttgcgctgaacacaattgacaggaaacttgcgtaaatgagcttcctgcacatgatgtgtccagtggcttgtaagttctgtgatttgtgagtttactcggtcttcaattttcacattattgtttttcttttcatgacaacttattcaactgcttgcaggggtttaaatcattctgtcaactggcccactatcagttccaacaggtcttcaaaaatcaaacccttgtgggagggtagctgtgatgaggatgacatgtgtgagtttgctgacaaggatgactgcccagctgttggatctgtaagaattttgcttcagctcttcctttttaagcattttatgtgagctattggtttcatgatctgtctatgcatttcatgaatctgctgaggatcaactgcattatgtcattagtcacgttacattcctgtcaatttcagagctacaatcccatgtctgaaccatttgataactgggaaagcaagtttgatgcgagcccagagcaaacttctcatcaatcaatggaatttggtggattagctaaacatgctgaaagcagcatgaccgaaaatgattttacttttccttgcgaaggaagttgtgaagatgatgatgtacttacagaatcgaaaataaaagcatttcttgacgagaaggtacttagcatttatgaaattacacaaattcagtactttactgctagtacttccactattgactgtttctctcaccaggctcttgatctgaagaagctacaaacacctttatatgaggagttctacaacacggtgaatgctgggaattctcaggtagctgaccatacttccaacggaattttctcaaatagtcccaaattgccacctcggggaaagtcaccaacgagtaagatgagaggaggtgcagcagcagcatcaacttgtgataactcaaataatacgaggcctgaaagctgcagcaaccaattatcagaagacactgtacagagcagccgaattttgagagaaatagcttctccgcaacttgatgagttaggaaacaaaatccattctgatgtccaagatagcccaaggtttgtgtcaaattgctttgaaacacagcatgttatgcaaaaaaagctaactgccttactaatgtagaaacaccgggtctgggattcattgcaatattctagtgatgtggccaagtgtcttgcattgattatctgctttaaccatcaacaatctaattgctggaccatttctgttaacagtgtgagcttcgctgaaaggcagagaaagtggaaagaagaattggtccaggagcttgagagggaaagaggcaagtaa
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| CDS seq | atgcgacgggacgacgccggcgggggagggttcggcgacctgttcgactccgtgcgccggtccatcgccttccgcaccagcacggccccggagacgccggggcctctcgggggcgggggcgggatcggggtacggatcagctcgtgcctccggaagtcgagggggatgggtctgctcgggctcatctccaagagcccctcgccgccgcgccgcctgctgccgccggcgcccgagttcagcggtggcggtggcggcgggggaaggggagggggagggggagaggagagcccgcagatccggtggcgtaagggcgagctgatcgggagcggcgcgttcgggcaggtctacctcgggatgaacctggacaccggagaactcctcgcagtaaagcaggttttgattgggagcaacaatgcgacgcgggagaaagcccaggcgcacataagagagctcgaggaagaagtgaagctacttaagaacctgtcacatcccaacattgttaagcggtaccttgggacagtccgggaggaagatactctgaatattttgctcgagttcgtgccaggaggttccattcagtctctccttgggaaactaggttcatttccggaggcagtcattagaaagtacacaaagcaaattttgcaagggttggagtatttgcataacaatgcaataatacatagagacataaagggagcgaacattcttgttgataacaaaggatgcattaaacttgctgattttggggcatctaagcaagtggcaaagttggctactatcacagccgctaaaacaatgaaagggacacctcactggatggcacctgaagtcattgttgggagtgggcataacttctctgcagacatctggagtgtgggatgcacagttattgaaatggctactggtaaaccaccatggagccagcagtaccaggaggttgcccttctatttcatgtcggaaccacaaagtcacacccgcctatacctgaacatctctcccccgaggccaaagattttctgctaaaatgcctgcagaaagaaccagagttgagatcgacagcatcagatttattgaagcacccatttgttacaggagaatcggagaacctgcagccactcaattgtgctgcacagcaggaaacttgcgtaaatgagcttcctgcacatgatgtgtccagtggcttgggtttaaatcattctgtcaactggcccactatcagttccaacaggtcttcaaaaatcaaacccttgtgggagggtagctgtgatgaggatgacatgtgtgagtttgctgacaaggatgactgcccagctgttggatctagctacaatcccatgtctgaaccatttgataactgggaaagcaagtttgatgcgagcccagagcaaacttctcatcaatcaatggaatttggtggattagctaaacatgctgaaagcagcatgaccgaaaatgattttacttttccttgcgaaggaagttgtgaagatgatgatgtacttacagaatcgaaaataaaagcatttcttgacgagaaggctcttgatctgaagaagctacaaacacctttatatgaggagttctacaacacggtgaatgctgggaattctcaggtagctgaccatacttccaacggaattttctcaaatagtcccaaattgccacctcggggaaagtcaccaacgagtaagatgagaggaggtgcagcagcagcatcaacttgtgataactcaaataatacgaggcctgaaagctgcagcaaccaattatcagaagacactgtacagagcagccgaattttgagagaaatagcttctccgcaacttgatgagttaggaaacaaaatccattctgatgtccaagatagcccaagtgtgagcttcgctgaaaggcagagaaagtggaaagaagaattggtccaggagcttgagagggaaagaggcaagtaa
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| Protein seq | MRRDDAGGGGFGDLFDSVRRSIAFRTSTAPETPGPLGGGGGIGVRISSCLRKSRGMGLLGLISKSPSPPRRLLPPAPEFSGGGGGGGRGGGGGEESPQIRWRKGELIGSGAFGQVYLGMNLDTGELLAVKQVLIGSNNATREKAQAHIRELEEEVKLLKNLSHPNIVKRYLGTVREEDTLNILLEFVPGGSIQSLLGKLGSFPEAVIRKYTKQILQGLEYLHNNAIIHRDIKGANILVDNKGCIKLADFGASKQVAKLATITAAKTMKGTPHWMAPEVIVGSGHNFSADIWSVGCTVIEMATGKPPWSQQYQEVALLFHVGTTKSHPPIPEHLSPEAKDFLLKCLQKEPELRSTASDLLKHPFVTGESENLQPLNCAAQQETCVNELPAHDVSSGLGLNHSVNWPTISSNRSSKIKPLWEGSCDEDDMCEFADKDDCPAVGSSYNPMSEPFDNWESKFDASPEQTSHQSMEFGGLAKHAESSMTENDFTFPCEGSCEDDDVLTESKIKAFLDEKALDLKKLQTPLYEEFYNTVNAGNSQVADHTSNGIFSNSPKLPPRGKSPTSKMRGGAAAASTCDNSNNTRPESCSNQLSEDTVQSSRILREIASPQLDELGNKIHSDVQDSPSVSFAERQRKWKEELVQELERERGK |
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| Function | Mitogen-activated protein kinase kinase kinase NPK1 [UniProtKB/Swiss-Prot:Q40541] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_09g0008900 | OsPr106_09g0008900.01 | Chr09 | 14097694 | 14102706 | + | NAM | ||
| CDS seq | atgcgacgggacgacgccggcgggggagggttcggcgacctgttcgactccgtgcgccggtccatcgccttccgcaccagcacggccccggagacgccggggcctctcgggggcgggggcgggatcggggtacggatcagctcgtgcctccggaagtcgagggggatgggtctgctcgggctcatctccaagagcccctcgccgccgcgccgcctgctgccgccggcgcccgagttcagcggtggcggtggcggcgggggaaggggagggggagggggagaggagagcccgcagatccggtggcgtaagggcgagctgatcgggagcggcgcgttcgggcaggtctacctcgggatgaacctggacaccggagaactcctcgcagtaaagcaggttttgattgggagcaacaatgcgacgcgggagaaagcccaggcgcacataagagagctcgaggaagaagtgaagctacttaagaacctgtcacatcccaacattgttaagcggtaccttgggacagtccgggaggaagatactctgaatattttgctcgagttcgtgccaggaggttccattcagtctctccttgggaaactaggttcatttccggaggcagtcattagaaagtacacaaagcaaattttgcaagggttggagtatttgcataacaatgcaataatacatagagacataaagggagcgaacattcttgttgataacaaaggatgcattaaacttgctgattttggggcatctaagcaagtggcaaagttggctactatcacagccgctaaaacaatgaaagggacacctcactggatggcacctgaagtcattgttgggagtgggcataacttctctgcagacatctggagtgtgggatgcacagttattgaaatggctactggtaaaccaccatggagccagcagtaccaggaggttgcccttctatttcatgtcggaaccacaaagtcacacccgcctatacctgaacatctctcccccgaggccaaagattttctgctaaaatgcctgcagaaagaaccagagttgagatcgacagcatcagatttattgaagcacccatttgttacaggagaatcggagaacctgcagccactcaattgtgctgcacagcaggaaacttgcgtaaatgagcttcctgcacatgatgtgtccagtggcttgggtttaaatcattctgtcaactggcccactatcagttccaacaggtcttcaaaaatcaaacccttgtgggagggtagctgtgatgaggatgacatgtgtgagtttgctgacaaggatgactgcccagctgttggatctagctacaatcccatgtctgaaccatttgataactgggaaagcaagtttgatgcgagcccagagcaaacttctcatcaatcaatggaatttggtggattagctaaacatgctgaaagcagcatgaccgaaaatgattttacttttccttgcgaaggaagttgtgaagatgatgatgtacttacagaatcgaaaataaaagcatttcttgacgagaaggctcttgatctgaagaagctacaaacacctttatatgaggagttctacaacacggtgaatgctgggaattctcaggtagctgaccatacttccaacggaattttctcaaatagtcccaaattgccacctcggggaaagtcaccaacgagtaagatgagaggaggtgcagcagcagcatcaacttgtgataactcaaataatacgaggcctgaaagctgcagcaaccaattatcagaagacactgtacagagcagccgaattttgagagaaatagcttctccgcaacttgatgagttaggaaacaaaatccattctgatgtccaagatagcccaagtgtgagcttcgctgaaaggcagagaaagtggaaagaagaattggtccaggagcttgagagggaaagaggcaagtaa
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| Protein seq | MRRDDAGGGGFGDLFDSVRRSIAFRTSTAPETPGPLGGGGGIGVRISSCLRKSRGMGLLGLISKSPSPPRRLLPPAPEFSGGGGGGGRGGGGGEESPQIRWRKGELIGSGAFGQVYLGMNLDTGELLAVKQVLIGSNNATREKAQAHIRELEEEVKLLKNLSHPNIVKRYLGTVREEDTLNILLEFVPGGSIQSLLGKLGSFPEAVIRKYTKQILQGLEYLHNNAIIHRDIKGANILVDNKGCIKLADFGASKQVAKLATITAAKTMKGTPHWMAPEVIVGSGHNFSADIWSVGCTVIEMATGKPPWSQQYQEVALLFHVGTTKSHPPIPEHLSPEAKDFLLKCLQKEPELRSTASDLLKHPFVTGESENLQPLNCAAQQETCVNELPAHDVSSGLGLNHSVNWPTISSNRSSKIKPLWEGSCDEDDMCEFADKDDCPAVGSSYNPMSEPFDNWESKFDASPEQTSHQSMEFGGLAKHAESSMTENDFTFPCEGSCEDDDVLTESKIKAFLDEKALDLKKLQTPLYEEFYNTVNAGNSQVADHTSNGIFSNSPKLPPRGKSPTSKMRGGAAAASTCDNSNNTRPESCSNQLSEDTVQSSRILREIASPQLDELGNKIHSDVQDSPSVSFAERQRKWKEELVQELERERGK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 11.466290 | 2.287181 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0383300 | RBH | 0.0 | 0.0 | 0.716337 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g21510 | RBH | 0.0 | 0.0 | 0.120218 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0383300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0008670 | RBH | 0.0 | 12.774771 | 0.815064 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0008650 | RBH | 0.0 | 4.134744 | 0.364584 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0008870 | RBH | 0.0 | 9.914919 | 1.695078 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0008710 | RBH | 0.0 | 0.409841 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0016310 | RBH | 0.0 | 6.491786 | 3.247617 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0220900 | RBH | 2.238564 | 1.7026035 | 2.3935185 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0008850 | RBH | 0.0 | 0.437295 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0194900 | SBH | 4.9785885 | 0.172745 | 0.2012335 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0008830 | RBH | 0.0 | 0.062217 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0008640 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0008530 | RBH | 0.0 | 9.528011 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0008570 | RBH | 0.0 | 0.0 | 0.113972 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0008580 | RBH | 0.0 | 4.792840 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G009130 | RBH | 0.0 | 2.940601 | 0.711520 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0008900 | RBH | 0.0 | 17.030514 | 0.000000 |
