Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_09g0006520 | OGI:09031540 | 12/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr09:11213603-11218048 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttatttctagttaaatatataaaaaaatatattacagtgtctaagcacaacatgcagcaacaaagcattcgaaacaactattaattctggagttatatcacgtggataatatgattggagattacaaatatggatgcgtgtatagattaatttcaccacacactagatcacctctctctctctttctctttctctgctccggtgcctctcatgactcatccatgtcttccatgcccatattttgtcgaaatcgctgcccagccgaagattaccgcacagggccaataagtaatcaacgttcgaaaaaggagaactcgtgcaataactggcaatacccgattccccttcctaacatacagcgctattgcaacacggaatgcattcaatggctccgtgaataagcatgtagatgcaatcatcatcattacacagattgcaattgcagtccatcgagccactggggctagcaccaaatacatacctagcgtaaaagcagcacccaaacttgtcactgagctgtaggccaggaataaagatgtgttgaagtgccaataacggagggccaaactaaccatagccattccggagtacatgaggttgatggtggctaagacagagcaaatgaatgcaattgtgtcggccatgatgaaagcatcaaatatataccttctagcaagtgttggtgtgccgccattgtagtgatcatcggctttataacctcctggtatggcgaacaatgcgccaaatgtgacagtaacaataagtaccgacccaatgcccagggtttgtgttgaatcagtcagtttttctgattccctcactttatccaactttttcctttgacggagaacttgttctttcaagtgatctacccgaagattaccatagcttgcgttgcaaatcattagtgctcgcaatatcagcttatctatgttctgcgaaggcaaatgaatataaggatcagtaactcagtatggtactatttatttttcttggtttctacaaaagaacaagttataatgcgataagagtggaaagagtattacccatccatagaaaaatccttctggaattttgctgcatgatatatctaaaggagtttgccccttatgatttggtatatttaagtttacttccttgttctttaataaagaacaaaatgtgtacttataccgatgttgaactgccacatgcatagctgtgttgccatcgttgtcttgcaaattcaaaatccaggctaacgatggagtactgcaagtgtacgcaactatatcccatgtgttgctctcagcagcaacatgaaggaaagtcctccccttagaatcgcggaaaccagcgatctcaggtcgctccttaataaaataggtgaatgccgttttggcacccgaggaggcagcgacatgtatagggtaaaatccttcagaatctggctggtacagctgaattgggttggcttctagcacaggaatgagtggagttttcgacttccattgctttagattccctccccaaaaaagtgatgcagcgaagtgaagtggcgtgcttccattttggtccgcttgttttgtgaggtctgtgttccaattcagtaacatttcggtcatctctgcacatgtggtgttcaagtcatactaagtaattaaaggagagagaactttgcagtaatAaaaaattgctatgaagaccaaactaaacataaggttgtggagtttcactttaaactgcaaagaagaaagagagatacacacacaaaggaacctacttgtgtaaattaacacactaaaaccaatatatatatcggatctgctagaaatttgtcgacagatttttgccaaaaaaatctgtcgttttctcgttcgttagattacttagatatgacgttgcgattcgtgcatttgtttgctctctgtatatgtagagtagttaaactcatcacgtttcacacggcaatcattaaagctctacctccatctcagtgatatgtactctggacttctggagcattgtattctctacttaatccaccgtgatgatttttcgctgcctaacaagccaatacttgagtgactagacgactatacacacagaatcagagataacaccaaaagagaaaattacagtataattttggtgtaactataaaagttacaatgtagtaacattatagttacatgttagtcacattgtaaatatagtgtagttacgatgtaactttgagtagatttgtttgtaatttttattttcaattttcaaatggcaaataaattagttatgttttctagtaagcttgtttgacatagtaatttgcaagttaatggtttttatgattaataattttttttgttaatcctaccattaattttggtaaagtagaataacagtacacagttgcttagataatcatttaatcgggctgcacagttcaaaaacagcacgtgcatagagacctgctgatcctggccgttgtgcatgtatcctacggcgggaaaaaactgacagtttttggctccaatttccgtcgaaagatgctatatggaaactcattatatatggaccgtcagttgcaggagatttagaataaacaaaagagtaaatttcacaaaattacagatacttgatcaaagcacatcttggtattattaatttcaaatttcgaaattattaattcataatgacacctaatcaagacttgatactacaactcaatatttattaattgattattattttgtattaatttacaaatttttaattactaaatcattaaataaactatgaatgagattgtagttggtatatgttaattctgaattttgaaattgttaagtcataaaaaagctataatttaggatatttgctccggtccaacaaaaagtatctcgaggtaccggtatctggtactaaattgtttcggatcgttggatctaacaatgcccatcttgtctagctagatctaacgattggaaatgacttagtgccgtgaggtatcggtacctcgagatacattttgctgtaccgaagcaaatctcataatttagactctagctgaccaagtagaactctacatttgtttattctgaattttagaaaccaaatatgtttggtagttattacatccgaatttaataaaaacacatagtatgtggtaaaaatatggtccgtatatatgataaaagaatgcatatgattttttattaatgtggtactttctagttattttttttctctcttaggattaatgtggtggttcttaagaaatcctcaaatttgtataagtaaatatttgtggattattatatactatttagatatcaccatatttgggtaaataagtgggaagataaaataagattgactaaattaacaaaattaagttgcagtcgtacctttgccttggagaaccgctgcgtgcaatgcgttttgcctattcgggccagagtacgaaagacgccctttactcaattcatgcaattttcttgctatgtccacacgttctagtaagacagctaggtacaacggcgaggttccagttccatctctaggatatctggccaattctgaatcaaattcaaaaagcttagttattatattcttatttccaacgcggactgcttcatgcaaggccgtctccttactgcagttttcctttctcagaaattcctttagtctcgagctgctaccagagttatcctcggatttagccagaccaattagacaagaaaccatttcagcattgccagccctgacagcgcagtgcaaaggcgtgtcacccttgttgttctccgcaaacaggagatgtttggccttgttgtagatgttcttggcacatttcaagtagaacctgtcttcaccacaggtggccacaacgtggagtgcggtgtccccttcaatggtgaccccattcaggtccatgcccggctctgcagaagctagagcgccagtagcttgctgtgttggcagtgttggctcaagcccttgaggaggcgcaggtacacctagcatgttgagaatttggtctagcgtagcacactcacctcgcgatgccagcgacagcaacaggggattcatggacggcttggtggcgacgtcttttctcgaggtcatcaccaccaacatggctgctgcatcttccacgctgagcgtatccttcaacgactcacagtcacttgggcttgttgctatcagcaccttggcatccattgcccctgtggacgagctagcgcgttcctctgcagctgcgttcttcaacgccattgccgccgcagaagcctctctgcttgagcccaacgccaccaccatggtcgtagtatcttccttgctcactatatccttcagccgctcacattcaccacggtctgtggccaccatcagtttggcggcgatgggcaaagcagttggtgccatggatgagctaggggtttcctccccgttgctcgcagcagccat
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| CDS seq | atggctgctgcgagcaacggggaggaaacccctagctcatccatggcaccaactgctttgcccatcgccgccaaactgatggtggccacagaccgtggtgaatgtgagcggctgaaggatatagtgagcaaggaagatactacgaccatggtggtggcgttgggctcaagcagagaggcttctgcggcggcaatggcgttgaagaacgcagctgcagaggaacgcgctagctcgtccacaggggcaatggatgccaaggtgctgatagcaacaagcccaagtgactgtgagtcgttgaaggatacgctcagcgtggaagatgcagcagccatgttggtggtgatgacctcgagaaaagacgtcgccaccaagccgtccatgaatcccctgttgctgtcgctggcatcgcgaggtgagtgtgctacgctagaccaaattctcaacatgctaggtgtacctgcgcctcctcaagggcttgagccaacactgccaacacagcaagctactggcgctctagcttctgcagagccgggcatggacctgaatggggtcaccattgaaggggacaccgcactccacgttgtggccacctgtggtgaagacaggttctacttgaaatgtgccaagaacatctacaacaaggccaaacatctcctgtttgcggagaacaacaagggtgacacgcctttgcactgcgctgtcagggctggcaatgctgaaatggtttcttgtctaattggtctggctaaatccgaggataactctggtagcagctcgagactaaaggaatttctgagaaaggaaaactgcagtaaggagacggccttgcatgaagcagtccgcgttggaaataagaatataataactaagctttttgaatttgattcagaattggccagatatcctagagatggaactggaacctcgccgttgtacctagctgtcttactagaacgtgtggacatagcaagaaaattgcatgaattgagtaaagggcgtctttcgtactctggcccgaataggcaaaacgcattgcacgcagcggttctccaaggcaaagagatgaccgaaatgttactgaattggaacacagacctcacaaaacaagcggaccaaaatggaagcacgccacttcacttcgctgcatcacttttttggggagggaatctaaagcaatggaagtcgaaaactccactcattcctgtgctagaagccaacccaattcagctgtaccagccagattctgaaggattttaccctatacatgtcgctgcctcctcgggtgccaaaacggcattcacctattttattaaggagcgacctgagatcgctggtttccgcgattctaaggggaggactttccttcatgttgctgctgagagcaacacatgggatatagttgcgtacacttgcagtactccatcgttagcctggattttgaatttgcaagacaacgatggcaacacagctatgcatgtggcagttcaacatcggtataagtacacattttgttctttattaaagaacaaggaagtaaacttaaatataccaaatcataaggggcaaactcctttagatatatcatgcagcaaaattccagaaggatttttctatggatggaacatagataagctgatattgcgagcactaatgatttgcaacgcaagctatggtaatcttcgggtagatcacttgaaagaacaagttctccgtcaaaggaaaaagttggataaagtgagggaatcagaaaaactgactgattcaacacaaaccctgggcattgggtcggtacttattgttactgtcacatttggcgcattgttcgccataccaggaggttataaagccgatgatcactacaatggcggcacaccaacacttgctagaaggtatatatttgatgctttcatcatggccgacacaattgcattcatttgctctgtcttagccaccatcaacctcatgtactccggaatggctatggttagtttggccctccgttattggcacttcaacacatctttattcctggcctacagctcagtgacaagtttgggtgctgcttttacgctaggtatgtatttggtgctagccccagtggctcgatggactgcaattgcaatctgtgtaatgatgatgattgcatctacatgcttattcacggagccattgaatgcattccgtgttgcaatagcgctgtatgttaggaaggggaatcggaaataa
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| Protein seq | MAAASNGEETPSSSMAPTALPIAAKLMVATDRGECERLKDIVSKEDTTTMVVALGSSREASAAAMALKNAAAEERASSSTGAMDAKVLIATSPSDCESLKDTLSVEDAAAMLVVMTSRKDVATKPSMNPLLLSLASRGECATLDQILNMLGVPAPPQGLEPTLPTQQATGALASAEPGMDLNGVTIEGDTALHVVATCGEDRFYLKCAKNIYNKAKHLLFAENNKGDTPLHCAVRAGNAEMVSCLIGLAKSEDNSGSSSRLKEFLRKENCSKETALHEAVRVGNKNIITKLFEFDSELARYPRDGTGTSPLYLAVLLERVDIARKLHELSKGRLSYSGPNRQNALHAAVLQGKEMTEMLLNWNTDLTKQADQNGSTPLHFAASLFWGGNLKQWKSKTPLIPVLEANPIQLYQPDSEGFYPIHVAASSGAKTAFTYFIKERPEIAGFRDSKGRTFLHVAAESNTWDIVAYTCSTPSLAWILNLQDNDGNTAMHVAVQHRYKYTFCSLLKNKEVNLNIPNHKGQTPLDISCSKIPEGFFYGWNIDKLILRALMICNASYGNLRVDHLKEQVLRQRKKLDKVRESEKLTDSTQTLGIGSVLIVTVTFGALFAIPGGYKADDHYNGGTPTLARRYIFDAFIMADTIAFICSVLATINLMYSGMAMVSLALRYWHFNTSLFLAYSSVTSLGAAFTLGMYLVLAPVARWTAIAICVMMMIASTCLFTEPLNAFRVAIALYVRKGNRK |
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| Function | Protein ACCELERATED CELL DEATH 6 [UniProtKB/Swiss-Prot:Q8LPS2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_09g0006520 | OsPr106_09g0006520.01 | Chr09 | 11213603 | 11218048 | - | NAM | ||
| CDS seq | atggctgctgcgagcaacggggaggaaacccctagctcatccatggcaccaactgctttgcccatcgccgccaaactgatggtggccacagaccgtggtgaatgtgagcggctgaaggatatagtgagcaaggaagatactacgaccatggtggtggcgttgggctcaagcagagaggcttctgcggcggcaatggcgttgaagaacgcagctgcagaggaacgcgctagctcgtccacaggggcaatggatgccaaggtgctgatagcaacaagcccaagtgactgtgagtcgttgaaggatacgctcagcgtggaagatgcagcagccatgttggtggtgatgacctcgagaaaagacgtcgccaccaagccgtccatgaatcccctgttgctgtcgctggcatcgcgaggtgagtgtgctacgctagaccaaattctcaacatgctaggtgtacctgcgcctcctcaagggcttgagccaacactgccaacacagcaagctactggcgctctagcttctgcagagccgggcatggacctgaatggggtcaccattgaaggggacaccgcactccacgttgtggccacctgtggtgaagacaggttctacttgaaatgtgccaagaacatctacaacaaggccaaacatctcctgtttgcggagaacaacaagggtgacacgcctttgcactgcgctgtcagggctggcaatgctgaaatggtttcttgtctaattggtctggctaaatccgaggataactctggtagcagctcgagactaaaggaatttctgagaaaggaaaactgcagtaaggagacggccttgcatgaagcagtccgcgttggaaataagaatataataactaagctttttgaatttgattcagaattggccagatatcctagagatggaactggaacctcgccgttgtacctagctgtcttactagaacgtgtggacatagcaagaaaattgcatgaattgagtaaagggcgtctttcgtactctggcccgaataggcaaaacgcattgcacgcagcggttctccaaggcaaagagatgaccgaaatgttactgaattggaacacagacctcacaaaacaagcggaccaaaatggaagcacgccacttcacttcgctgcatcacttttttggggagggaatctaaagcaatggaagtcgaaaactccactcattcctgtgctagaagccaacccaattcagctgtaccagccagattctgaaggattttaccctatacatgtcgctgcctcctcgggtgccaaaacggcattcacctattttattaaggagcgacctgagatcgctggtttccgcgattctaaggggaggactttccttcatgttgctgctgagagcaacacatgggatatagttgcgtacacttgcagtactccatcgttagcctggattttgaatttgcaagacaacgatggcaacacagctatgcatgtggcagttcaacatcggtataagtacacattttgttctttattaaagaacaaggaagtaaacttaaatataccaaatcataaggggcaaactcctttagatatatcatgcagcaaaattccagaaggatttttctatggatggaacatagataagctgatattgcgagcactaatgatttgcaacgcaagctatggtaatcttcgggtagatcacttgaaagaacaagttctccgtcaaaggaaaaagttggataaagtgagggaatcagaaaaactgactgattcaacacaaaccctgggcattgggtcggtacttattgttactgtcacatttggcgcattgttcgccataccaggaggttataaagccgatgatcactacaatggcggcacaccaacacttgctagaaggtatatatttgatgctttcatcatggccgacacaattgcattcatttgctctgtcttagccaccatcaacctcatgtactccggaatggctatggttagtttggccctccgttattggcacttcaacacatctttattcctggcctacagctcagtgacaagtttgggtgctgcttttacgctaggtatgtatttggtgctagccccagtggctcgatggactgcaattgcaatctgtgtaatgatgatgattgcatctacatgcttattcacggagccattgaatgcattccgtgttgcaatagcgctgtatgttaggaaggggaatcggaaataa
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| Protein seq | MAAASNGEETPSSSMAPTALPIAAKLMVATDRGECERLKDIVSKEDTTTMVVALGSSREASAAAMALKNAAAEERASSSTGAMDAKVLIATSPSDCESLKDTLSVEDAAAMLVVMTSRKDVATKPSMNPLLLSLASRGECATLDQILNMLGVPAPPQGLEPTLPTQQATGALASAEPGMDLNGVTIEGDTALHVVATCGEDRFYLKCAKNIYNKAKHLLFAENNKGDTPLHCAVRAGNAEMVSCLIGLAKSEDNSGSSSRLKEFLRKENCSKETALHEAVRVGNKNIITKLFEFDSELARYPRDGTGTSPLYLAVLLERVDIARKLHELSKGRLSYSGPNRQNALHAAVLQGKEMTEMLLNWNTDLTKQADQNGSTPLHFAASLFWGGNLKQWKSKTPLIPVLEANPIQLYQPDSEGFYPIHVAASSGAKTAFTYFIKERPEIAGFRDSKGRTFLHVAAESNTWDIVAYTCSTPSLAWILNLQDNDGNTAMHVAVQHRYKYTFCSLLKNKEVNLNIPNHKGQTPLDISCSKIPEGFFYGWNIDKLILRALMICNASYGNLRVDHLKEQVLRQRKKLDKVRESEKLTDSTQTLGIGSVLIVTVTFGALFAIPGGYKADDHYNGGTPTLARRYIFDAFIMADTIAFICSVLATINLMYSGMAMVSLALRYWHFNTSLFLAYSSVTSLGAAFTLGMYLVLAPVARWTAIAICVMMMIASTCLFTEPLNAFRVAIALYVRKGNRK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0343200 | SBH | 10.366726 | 9.794417 | 2.683925 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g17329 | SBH | 5.632617 | 4.769748 | 0.477652 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0343200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0006450 | SBH | 0.090379 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0006460 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0006700 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0006550 | SBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0006660 | RBH | 3.620526 | 23.517025 | 13.299588 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0185900 | RBH | 0 | 0.0048205 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0006640 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0161700 | RBH | 0 | 0 | 0.010459 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0006500 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0006320 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0006340 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0006260 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0006330 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G006860 | SBH | 0.051388 | 13.900421 | 1.647125 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0006730 | SBH | 0.0 | 25.470318 | 2.086420 |
