Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_07g0024340 | OGI:07072700 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr07:27191419-27196280 | ||||||||
| Gene Symbol | CRP5, OsCRP5, cpRNP5, RNP29, - | ||||||||||
| DNA seq | gagccccaaaaccttatcttcccaaagcctcatctcctccttcctcccaccacctcgcctcgccatggcggccaccctcttctccacctcgctcacccccaccttcctcccggccgtCccctgccccaagcccgcgccgccggcctccgcctgcttcccctgcgcgctgccgccgcgcgccgcgctagcgctgcggaggcggctttctcccgtggccgtcgcggtgtcgtcggaggtggaggaggaggagggtggcgcggagtccgagggggagttcgccgaggacctcaaggtgtttgttggtaaccttccgttcagcgtcgacagcgcgcagctcgcggggctcttcgagcaggccggctccgttgagatggtcgaggtataaattactcacacggcctcTttttcgaatagattcatagtttcatctcggtaaattgggcgacgcaattttgctagagtggactaaacagtctatttatacatgaggaatccactagatgaggaattactgcaacgaattggttcagtgttctctaggatttatatttgagttttatatgttaatgctcaaatgttttttttaattggttcaatagtagttaaattacgcaacaaatagatgttctgaattcaattgtccagccaagcaaggcaactacagagtgtcatgcgtacaagtgagtgggttcttctcatgataataatactaggttctcgttttctttttttcttttttttttgtgacaggttgtatatgacagacagaccggaagaagccgtggctttggattcgtcacaatgtctacagccgaagaagctggtgctgccgtcgaacaattcaatggatacgtgagtatactcccatgttatattaatctcttttgtggtgcattcttataagtgggttaattagttatagcggaaatttgtgcatctatgcgaaaagtttaattctctatcaactgtgatgttgtagtattgatggtttatgaacattgtgcacttaaaattaactatttatgtagcaaaaggttatacttgaaccagcattactaaaatcctgaaacctgattctcagcatgactgactgctttttcatgtcgttttgacattttgcttaatgtcttgagaccaatccatcaaaaattgattcgtgtccaaatccctggcaatacattgaatggttgaatattagtgattaatcaTATtatatttcaaaacagacattccaaggaagacctctgagggtaaactcagggccgcctccgcctcgggatgatttcgcgccaagatcacctaggggtggtgggagcaactttgattcatccaacaagctctatgtagggaaccttgcttggggtgtcgacaactcgacactcgagaacctgttcagtgagcagggaaccgtgctcgatgccaaggtcatctacgacagggagagcggcaggtcgaggggttttggttttgtcacctatggctccgctgaagaagtcaacaatgccatatcaaatcttgacggcgttgtaagtaccaaacatattcttattttaacatgtcaaatttcaccattccaattccctctcaagctaagttgctcgaggtgatttgTAtatataattgctcatatgatttcagtaattgtaagtatgctaattgattgtgtgcttttgttctttaggacctggacggcaggcagatccgagttacagttgcagaatcaaagccaaggcgccaattttgagattttttttttggttatgttgatttagaggttgatgatgtgcttccaagatgttagtttgtagcttctactattgtacaccaatatggcgaaaaggaaaattgatgcggttgatgagagactgaaagtctgaaattgtacacgaggggaagatttttccccaaagatgcaatgcacagatcctcttgttagaaagaccatctttatctcttccaatcttgtttgatccccaatttggtttcatctcagccgttggcatgtatacaatgtacatgtgcggtggtagcatatatggattgatagttggacccctcatagattattgattgcgttgtctcaccatcaacattgtgccgttgtctcgccatcaacattgtgcggccatggataaaggatgtatgcagcaagcaaaagaggaagaagaccccaaacccaaagcttatctacccaatcgatcattttgcgtaatgcatgtgcttccttttcccctccattgatatctgcccTTTCAAtttcatgctcacctcgtccaactaatggacgatcgatgagctgtcttgcatgttagagtcgatcatctatggactttcattaatttcccatgtttaTttttttttggaataatccatgtttatatgttcatactactgcagcacatagcttcaaaatagttcgaaaactagttactctttccgtcccaaactttatggatactggtatgaaattattttaattttaacaagttttttagaggatttttttaaaagaagagtattgtatctagttatgctcaTttgatatcgtaaatattagttttaaaataagggatgtgcttctatgcttctcactaaaaaaacctgcacggatattaaagctcatgaatgatttagattaaaagttgcttaacagagtaaaagtcattagggaggggcagttttgtcctgtgaagttatcacatactcgatcagccgatgaggagttacaaatcgatgactctcagcgatcgcgctcgcttcctccaccgtgcatcgcccgtatacttttgctgcgccacccccttcttcctcctctcgccacaccgcctgtcccgttggtctaccgcggcgtgctccctgccttcgcccatttctgatttttcttgtcatgcttcttatctctacccccatctcattttttgatttggcaagaacatggatgccaatcaaatggtggattgaggtgctgcacatgtgtagccggaacagaggaggattcgctgttttggaatcatggaatgccttctttttttctcttgtacttgcgatcgaatgcggcggcaggcggggcggcgctgcatcaggattgaacgtttgggatatgggtaactacctcaaggacgaaattgctcttcctaataacgtttagcctgttaatcaccttttaatctagaccattcaccatctttaacattcgtgcTtttttttttctgaggagcatagaaacacatctcttaaaataaatctagtcaaatttaggatatttgacttggaacaaatatattatctcttcttatattctgagacagagtactagttagctttgtctctaacaattattccattctttaacaaaagttacacctattacttttatcatcaagatcaattaaaaattaactcatcttgtatgtaacaaaaatgaggaagtatatccacgcatgcaaccaatgagtattaagatgttacctcgggttctgattaaagtcttggatgtttagagactacaaataagaacaatttatttggaaaaactcaaatataaaataagttaactcatatcgatgtagatgggagtactatataagaacggggagtggattttcatccttcgagaggatatcccctcgttatttgcatgtcactcaaatggttatgaaaaaatttgaaaaaaaattgagaagatgtattaacatgtgatatatcactctacaaacatataagttcaaatttaacttttacatctcgcaacgaaaaaacaaattaaactacaattagttaacgtatattcacaggcgccgctgccgatggcgagggatgaaaatagtttccctataagaacgagctcgtctcatgatcgttcactcaccagcgagtacaagctactccttcctgcaaaggagatcatcaatggcgcttacttttacgcgccatagcttggtcgtcattgtgggcgcgcttcttctccagctcttcttcctcgccggcttggCCccCCGGCGGCGGCGGCTGCGGGGCCGACGGGGCAGGTGACGGTGTTCTGGGGCCGGAACAAGGACGAGGGGTCTCTCCGGGAGGCGTGCGACACCGGCTTGTACACCATGGTCGTCATGTCCTTCCTCAACGTCTACGGCGCCCGCGGCGGCGAGTACCGCCTCGACCTCGCCGGACACCCGGTGGGCGGCATCGGCGGCGACGTCAAGCACTGCCAGCGCAAGGGCGTCCTCGTCTCCCTCGCCATcggcggcggcgcctactcgctcccgaccaaccagtcggcgctcgatctcttcgaacacctctggaacacctacctcggcggcggcggcggcaagggcgccgtggcggcggcgcggccgttcggcgacgccgtgctcgacggcgtcgacttcttcctcgaccgcgccacgccggcggagcgctacgacgtgctcgccacggagctcgccaagcgcggcaagccgccgcgccgcgcgctgcacctgacggccacgacgcggtgcgcgttcccggaccgcggcgccgcgcgggcgctcgccacgggcgccttcgagcgcgtccacgtgcggttctacggcggcggcggcggcggcgacgacaactgcaccgtgtactgggaggacgcgtgggacaggtggacggcggcgtacccgcgcagccggatctacttcggcctgctggcggcgCcggcggtggcggaggaggagcaggacggccggagcgggtacgtctaccccaagacgctctactaccgctacgtgccggagttgcagaaggcggccaactacggcggcttcatgatctgggatcgctacagcgacaagcagagcgggtacagtggctacgtcaagaactgggcttga
More
|
||||||||||
| CDS seq | atggcggccaccctcttctccacctcgctcacccccaccttcctcccggccgtCccctgccccaagcccgcgccgccggcctccgcctgcttcccctgcgcgctgccgccgcgcgccgcgctagcgctgcggaggcggctttctcccgtggccgtcgcggtgtcgtcggaggtggaggaggaggagggtggcgcggagtccgagggggagttcgccgaggacctcaaggtgtttgttggtaaccttccgttcagcgtcgacagcgcgcagctcgcggggctcttcgagcaggccggctccgttgagatggtcgaggttgtatatgacagacagaccggaagaagccgtggctttggattcgtcacaatgtctacagccgaagaagctggtgctgccgtcgaacaattcaatggatacacattccaaggaagacctctgagggtaaactcagggccgcctccgcctcgggatgatttcgcgccaagatcacctaggggtggtgggagcaactttgattcatccaacaagctctatgtagggaaccttgcttggggtgtcgacaactcgacactcgagaacctgttcagtgagcagggaaccgtgctcgatgccaaggtcatctacgacagggagagcggcaggtcgaggggttttggttttgtcacctatggctccgctgaagaagtcaacaatgccatatcaaatcttgacggcgttcttggtcgtcattgtgggcgcgcttcttctccagctcttcttcctcgccggcttggCCccCCGGCGGCGGCGGCTGCGGGGCCGACGGGGCAGGTGACGGTGTTCTGGGGCCGGAACAAGGACGAGGGGTCTCTCCGGGAGGCGTGCGACACCGGCTTGTACACCATGGTCGTCATGTCCTTCCTCAACGTCTACGGCGCCCGCGGCGGCGAGTACCGCCTCGACCTCGCCGGACACCCGGTGGGCGGCATCGGCGGCGACGTCAAGCACTGCCAGCGCAAGGGCGTCCTCGTCTCCCTCGCCATcggcggcggcgcctactcgctcccgaccaaccagtcggcgctcgatctcttcgaacacctctggaacacctacctcggcggcggcggcggcaagggcgccgtggcggcggcgcggccgttcggcgacgccgtgctcgacggcgtcgacttcttcctcgaccgcgccacgccggcggagcgctacgacgtgctcgccacggagctcgccaagcgcggcaagccgccgcgccgcgcgctgcacctgacggccacgacgcggtgcgcgttcccggaccgcggcgccgcgcgggcgctcgccacgggcgccttcgagcgcgtccacgtgcggttctacggcggcggcggcggcggcgacgacaactgcaccgtgtactgggaggacgcgtgggacaggtggacggcggcgtacccgcgcagccggatctacttcggcctgctggcggcgCcggcggtggcggaggaggagcaggacggccggagcgggtacgtctaccccaagacgctctactaccgctacgtgccggagttgcagaaggcggccaactacggcggcttcatgatctgggatcgctacagcgacaagcagagcgggtacagtggctacgtcaagaactgggcttga
More
|
||||||||||
| Protein seq | MAATLFSTSLTPTFLPAVPCPKPAPPASACFPCALPPRAALALRRRLSPVAVAVSSEVEEEEGGAESEGEFAEDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVLGRHCGRASSPALLPRRLGPPAAAAAGPTGQVTVFWGRNKDEGSLREACDTGLYTMVVMSFLNVYGARGGEYRLDLAGHPVGGIGGDVKHCQRKGVLVSLAIGGGAYSLPTNQSALDLFEHLWNTYLGGGGGKGAVAAARPFGDAVLDGVDFFLDRATPAERYDVLATELAKRGKPPRRALHLTATTRCAFPDRGAARALATGAFERVHVRFYGGGGGGDDNCTVYWEDAWDRWTAAYPRSRIYFGLLAAPAVAEEEQDGRSGYVYPKTLYYRYVPELQKAANYGGFMIWDRYSDKQSGYSGYVKNWA |
||||||||||
| Function | Xylanase inhibitor protein 1 [UniProtKB/Swiss-Prot:Q8L5C6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_07g0024340 | OsPr106_07g0024340.01 | Chr07 | 27191419 | 27196280 | + | NAM | ||
| CDS seq | atggcggccaccctcttctccacctcgctcacccccaccttcctcccggccgtCccctgccccaagcccgcgccgccggcctccgcctgcttcccctgcgcgctgccgccgcgcgccgcgctagcgctgcggaggcggctttctcccgtggccgtcgcggtgtcgtcggaggtggaggaggaggagggtggcgcggagtccgagggggagttcgccgaggacctcaaggtgtttgttggtaaccttccgttcagcgtcgacagcgcgcagctcgcggggctcttcgagcaggccggctccgttgagatggtcgaggttgtatatgacagacagaccggaagaagccgtggctttggattcgtcacaatgtctacagccgaagaagctggtgctgccgtcgaacaattcaatggatacacattccaaggaagacctctgagggtaaactcagggccgcctccgcctcgggatgatttcgcgccaagatcacctaggggtggtgggagcaactttgattcatccaacaagctctatgtagggaaccttgcttggggtgtcgacaactcgacactcgagaacctgttcagtgagcagggaaccgtgctcgatgccaaggtcatctacgacagggagagcggcaggtcgaggggttttggttttgtcacctatggctccgctgaagaagtcaacaatgccatatcaaatcttgacggcgttcttggtcgtcattgtgggcgcgcttcttctccagctcttcttcctcgccggcttggCCccCCGGCGGCGGCGGCTGCGGGGCCGACGGGGCAGGTGACGGTGTTCTGGGGCCGGAACAAGGACGAGGGGTCTCTCCGGGAGGCGTGCGACACCGGCTTGTACACCATGGTCGTCATGTCCTTCCTCAACGTCTACGGCGCCCGCGGCGGCGAGTACCGCCTCGACCTCGCCGGACACCCGGTGGGCGGCATCGGCGGCGACGTCAAGCACTGCCAGCGCAAGGGCGTCCTCGTCTCCCTCGCCATcggcggcggcgcctactcgctcccgaccaaccagtcggcgctcgatctcttcgaacacctctggaacacctacctcggcggcggcggcggcaagggcgccgtggcggcggcgcggccgttcggcgacgccgtgctcgacggcgtcgacttcttcctcgaccgcgccacgccggcggagcgctacgacgtgctcgccacggagctcgccaagcgcggcaagccgccgcgccgcgcgctgcacctgacggccacgacgcggtgcgcgttcccggaccgcggcgccgcgcgggcgctcgccacgggcgccttcgagcgcgtccacgtgcggttctacggcggcggcggcggcggcgacgacaactgcaccgtgtactgggaggacgcgtgggacaggtggacggcggcgtacccgcgcagccggatctacttcggcctgctggcggcgCcggcggtggcggaggaggagcaggacggccggagcgggtacgtctaccccaagacgctctactaccgctacgtgccggagttgcagaaggcggccaactacggcggcttcatgatctgggatcgctacagcgacaagcagagcgggtacagtggctacgtcaagaactgggcttga
More
|
|||||||
| Protein seq | MAATLFSTSLTPTFLPAVPCPKPAPPASACFPCALPPRAALALRRRLSPVAVAVSSEVEEEEGGAESEGEFAEDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVLGRHCGRASSPALLPRRLGPPAAAAAGPTGQVTVFWGRNKDEGSLREACDTGLYTMVVMSFLNVYGARGGEYRLDLAGHPVGGIGGDVKHCQRKGVLVSLAIGGGAYSLPTNQSALDLFEHLWNTYLGGGGGKGAVAAARPFGDAVLDGVDFFLDRATPAERYDVLATELAKRGKPPRRALHLTATTRCAFPDRGAARALATGAFERVHVRFYGGGGGGDDNCTVYWEDAWDRWTAAYPRSRIYFGLLAAPAVAEEEQDGRSGYVYPKTLYYRYVPELQKAANYGGFMIWDRYSDKQSGYSGYVKNWA
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_07g0024340 | OsPr106_07g0024340.02 | Chr07 | 27191420 | 27193376 | + | IsoSeq | ||
| CDS seq | ccccaaaaccttatcttcccaaagcctcatctcctccttcctcccaccacctcgcctcgccatggcggccaccctcttctccacctcgctcacccccaccttcctcccggccgtCccctgccccaagcccgcgccgccggcctccgcctgcttcccctgcgcgctgccgccgcgcgccgcgctagcgctgcggaggcggctttctcccgtggccgtcgcggtgtcgtcggaggtggaggaggaggagggtggcgcggagtccgagggggagttcgccgaggacctcaaggtgtttgt
More
|
|||||||
| Protein seq | PQNLIFPKPHLLLPPTTSPRHGGHPLLHLAHPHLPPGRPLPQARAAGLRLLPLRAAAARRASAAEAAFSRGRRGVVGGGGGGGWRGVRGGVRRGPQGVC |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| AL | Chr07 | 27192944 | 27196280 | + | OsPr106_07g0024340.02 | OsPr106_07g0024340.01,OsPr106_07g0024340.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 153.817780 | 2.098911 | 76.197052 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0631900 | RBH | 170.955933 | 160.451950 | 23.738211 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g43810 | RBH | 54.566872 | 51.708920 | 2.874298 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0631900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0024370 | RBH | 0.0 | 0.0 | 7.264242 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0024420 | RBH | 0.0 | 0.0 | 1.629080 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0024290 | RBH | 0.0 | 0.0 | 11.492111 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0024210 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0019220 | RBH | 23.094028 | 0.0 | 24.632578 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0430300 | RBH | 323.18589 | 71.833958 | 15.467638 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0024860 | RBH | 19.932472 | 0.0 | 3.841234 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0441600 | RBH | 251.395317 | 37.756855 | 37.2850875 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0024100 | RBH | 3.963773 | 0.146703 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0024250 | RBH | 12.947385 | 1.562067 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0024180 | RBH | 108.571381 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0024360 | RBH | 0.0 | 0.0 | 5.482789 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0024110 | RBH | 15.309613 | 8.123934 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G024080 | RBH | 22.480320 | 0.904277 | 13.913924 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0024100 | RBH | 83.944954 | 53.263729 | 21.417736 |
