Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_06g0004580 | OGI:06009330 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr06:3090620-3105008 | ||||||||
| Gene Symbol | OsSub49, SUB49 | ||||||||||
| DNA seq | agtggtagtcgagttaattacgttttgcttctctctttctcgtttccggcgaggcaaaacgggcgggggcgcggccgatctccgccgcgcggcgcggcggcttgatctcggatggcgctggagaggcggctcgcgtacgccgcgctcatcccgttcctccttctcgcgctccccatcctgccgtccgattccccgtccggcggcggcggcggtggcgcgggtgggggtgggggagggggagaaaccctagacccgcccgcggcgaagtacgtggtgcggttcgtcgagtaccggcccgccgacgagcaccgggagtacctggaggacggcctccgcggggccgcgcggcctccccccgccgcgtcgtggcggtgggtggagcggcggaaccccgccgccgcgttccccaccgacttcgccgtgctcgagatccgcgacgcgtgccgcgcggctgtcgtcgacgccgtcagtgcgctcggccgtgtccgggacgtgcacgccgatgcgagctactccaggggcgtcctgtctgcggatcggccgcggcagcaggggaagctgttcacagccatgtcgttcgagggggaggaaggaGggggagatagggaggtcgggtgcagcactgatagtaataattcctcttctgctggttggaggcggaagcttctcgtgcaggtagacttctgctactcagaatctccacgtgatcatttttatccattttcgtgtcaataatgattacatgcaattgaaacataatgtattaagatctttacatctatcttcaagaaggaataaacctgtgaattgtattgaagatcaccatatatatgttttgatgacaaatttgtcggaaactgaaaaaagaaaaaaacattggtattcaggcaaaggtatccatgtattatcctcaggtagttagtgaatatgggttcaaaatatgagccttatccatacaaaccagaactggaaattgatgtactgtgtagtgtattagtgtataatctgctactctgcttaaaattatagcatgacactacacagcggatacaagatgccaagacacttccataagaacctgatgtgtaacatatacatccatgtcaacagttctgtccatgtgaagttatcaggttgtatgctagaatgttttagcatgacaaggtaataacatgtgtccttttacagagatcacaagtaacgtctctttttggagctgaacgactatgggggagaggtttcactggtaggaaagtcaagatggccatttttgacactggtattcgagcagatcatccgcacttccgtaatattaaggtataatatgatgctagtaaatatcactgcctgtgattatggtcaaatacacatgcatacaaaggaaaaagaacattggtttggaggggaaaacagaacatgcattatatacaacttcatattctttatggtgtttccttcctggtctcagatgttgtattaattattgtcaaattgccatccatactgtaattgggattccttaaaagtatcactattgttcctagtattgcaaggcaagaacacaatgataaacatgtattattatcctaaatgttgcctctccttgcctcctcgttgtttgttatccccatcacacttcttaagaaactaatttttgtaggagcgcactaattggacaaacgaagacacactaaatgataaccttggacatggaacatttgtagctggagttattgctggtcaagatgcagaatgccctggatttgcacctgacactgagatatatgcatttcgagtgttcacagatgctcaggtatggacttggctgctatacatgaactatgaagcacaaaaaccagatattctttccctgtcaatttaattcattctttaacctttgatattgcaaatggaataagtgtttcccaaaattatggaaatccacctgtaacttttaaacttttagaacatagaatttagaagcatatgtgtgctgttctttctatatatgagcataatacattttaaaatctctcagatgccttttatccacgatgtgttatccacggttaaattttatttacgtgtttgaaagcatatacaccaaactgttgttagaacacactgctggtaagattttgagaattctatcttgttctcagtgcagatatcctacacatcgtggttcttggatgcatttaattatgcaattgcaactggtatggatgtactgaatttgagtattggtggacctgattatctggatctcccctttgtggaaaaggtagagcaggaggataactttcttcatttccctcaatcatgttcctatttgtactgcattagaatttgattttgtttaaaactagaggtcgttactgtaggaataagtcttggctggttggtcttggtcttgtggtgcctttttcctgcttttcagctttctaggacagcatctctttctaggacagcatctctactttcagtttgagatgctctaggacagtttgttgggatgctctgctctaggacagtttgttgggatgctctaggacagcaccctcttagactagcatggctgcatggctgctacaagcagctataaatatgtatccaatcctttttgggaggatatggcttttgtgtttagtgaatgaagaaaaccagaaaattgccccatctcgagtgccatcctcttctcaatgagagtaaccattgaaattctaacatctggtatcagagcaacactttcctgtaggctaaacatctcttgttccaccccttcccaagctcggttgagctctcagccagcagcagcaccagttgctcctccttcccctttcccttccccctctccacgcagcagccccccgcaggtgcgccatgtccgacgctcggtctcggcgttcggacgcctcgagcactcggcgtcagcaggacgccgagctcgccgcagcagaagagcgcaggcgagcaacagctcagaccgctgcagcagcagcgagggcggccagactggcggcagcggagttggcagcagccagggcggaggcggaggcggaggcggcgaaagatgcggcacgtgcggcggaggtagaggttgagaccttgcgcagcagcatcaacggctccatcgccggcgacatcaccgccgacagggagcttgaggagctggcaagaggaagggcacgggagcgggcagagcggtgggcagcagcccacctccacggcggcggcggcggtccaagggaccgcgggcccgccaacgggaacccagatgggcgcgggcgtgccggcggcagcccggagcccgcacgcggccctcgcaggcagcgcggctctttctcccctgaccggcgccatggtcaccacggcgtccagacggtggtcagggactttggtcccggcggtgggtggcctaccctcaccaaaaccaactacatcgagtgggccgcagtgatgagggtgaggctccaggtgcggcaaatgtgggaggcagtccggtacggcgacgtcgactacgacgaggatcggcgagcactggatgccctcatcgctgcagtcccgcccgagatgcagttctcgctttcccagaagcggactgccaaggaggcctgggacgccatcgctgcggcacgcatcggcagcgaccgcgcccgcaagtccacactgcaggcactccgcaaggagtgggagaacctggccttcaagccaggtgaggatgttgatgactttgctctccgtctcaacactctcttgcagaaaatggtgcagtacggcgacgacacctatgacgaggagagagctgtcgagaagctcttccgctgcgtccctgagaagtacaggcagatcgctcgctcgattgaatctctgctggacctctccacgatgtcgatcgaggaggcgttaggtcgcctcaaggtcgtcgatggtgatgagccacagcctctctcggggcccatcaccatcggcgggaagctccatctcactcgggagcagtgggaggcctctcagggtgacgggaggaagggggagtcatcttccccgacaggcggccgtaagccgcgcaaggcgcggggaggtgtccagctacggtgggcgcgaagacgtgccgagggtggcgcccgcagaggcgcccagggcattgccactggcaaccacaagccggcacgagacgacgcctgccgcaactgtggcaagcttggccattgggccaaagactgtcgacagccacgacgcggccaggcccacgtcgcacgggtggaggaggaagagccggctctgctcctagctcacgcaagcatcgagctacctccagcggcaccggccgcagcggctttcctccaccttgatgagccgaaggtactcgtctccctctgcgacggctccagcaacgacaaggctgatgggtggtacctcgacaccggcgccacccatcacatgacctgccgacgggagttcttcaccgagttcgactccagcgtccgaggctccgtcaagttcggggacgcctccggcgtggagatcaagggtgttggctccgtgaccttcaccgccaagtccggtgagcacaggctgctcaccggagtctactacatccccgcgttgaggaattctatcatcagcgtgggacagctggatgagaacggctcacgcgtgttggtcgaggacggactcatgaggatttGggatcgccgtcgtcgccttcttgccaaggtaaccagaggcactaatcgactctacatcctcagcgcgcaggtcgcacaaccagtttgcctcgccgctcgtcgggacgacgaggcatggcagtggcacgagcgcttcgggcatctccacttcgaggccctgaagcgcctcagtgccaaggagatggtgcgaggcatgccgtgccttgaccacgtggagcagctctgcgacgtctgcgtggtgacgaagcagcggcggctcccctttccccagcagacgagcttccgagccaaggagcggctcaagctcgtgcacggggacttgtgtggcccagtgacaccggccacaccaggaggacgacgctacttcctactgctcgtcgacgacctctctcgctacatgtgggtgatggtcctcggcagcaagggagaggctgcggatgccatcaggcgcgcgcaggccgctgcagaggcggagtgcggccgcaagctgcgcgtgctgcgcaccgacaacggcggcgaattcacggcggctgaattcgcgtcgtactgcgctgatgagggcattcagcgccactacaccgcgccgtacagcccacagcagaacggcgtcgtcgagcggcgcaaccagacggttgtggggatggctcgggctcttctcaagcagagggggatgccagccatcttctggggggaggcggtggtgacagccgtctacatcctcaatcgctcgcctaccaaggccctcgatggcaggacaccgtacgaggcctggcatgggcacaagccggcggtctcccacctacgggtcttcggctgcctcgcgttcgccaaggagctcggccacatcggtaagctcgacgacaggagcaccccaggggtgttcatcggctacgcggagggctcgaaggcctaccgcatcctcgacccggagacacagcgtgtgcgcactgcgcgcgatgttgtgttcgacgaagggcgagggtgggtatgggacaaggcggtggacgatggttcgactccgacgtacgacgacttcaccatcgagtacgtccacttcgagggagctgggggagtaggcagctcttcatctagcgtgtctaccccagcccccgaatctccaccgactccgacaccaacacaccctcgggccacgacttcgactacgacgagctcttcgtcgacaccaccccagccagtgactccacatgctccagctccaacagccactcctccaagcacgtctactccgacgccagctcgtgttgagcgcagcccggtggagttcgctactccgctctcccacgacggggagcgcatcgacgcgtaccacgacggcgagcagctacggtaccgtacgatggaggatcttctcggcgaccagttggtgccgggactggtgcctcgcgacttagaggcgcagttgcaccttgcgtgcgacgacggtgagcctcggtcttttgcagaggccgagaaacacgcggcatggcgtgccgcgatgcagtcggagatggacgcggttcaggagaaccgcacctgggagcttgctgacctccctcgtggtcaccgcgcaatcacccttaagtgggtgttcaagctgaagagggatgaagccggagccatcgtcaagcacaaggctcgcttggtagcacgcggtttcgtgcagcaggaggggatcgactacgacgatgccttcgctcccgtggcacggatggagtccgtgcgactcctttttgcgctggctgctcaggaaggctggggcgtccatcacatggacgtcaagtcggcgtttctaaacggcgacttgaaggaggaggtctacgtgcaccagccgccgggatttgtgatccccggcaaggagggcaaggtgctacgcctgcacaaggccctctacggcttgcggcaggcaccgagggcgtggaatgccaagttggattccacgctcaaggggatgggcttcgagcaaagcccgcacgaggcggccatctaccggcggggcattggaggaaatgccttgctggtgggtgtctacgtcgacgacttggtgatcaccggcaccaaggatgcggaggtcgcggcgttcaaggaggagatgaaggccactttccagatgagtgatctggggcctctctccTtctacctggggatcgaagtgcaccaggacaactccgggatcacgcttcgacagaccgcctatgccaagcgcgtcgttgagctggctgggctcaccgattgcaacccagctctcactccgatggaggagagactgaagctgagccgcgacagcacggcggaggaggtggatgctacacagtaccgacgtcttgtggggagccttcgctacctcacccacacacggccggacttggccttctccgtcggctacgtcagtcggtttatgcagcgaccgacgacggagcaccagcaggccgtgaagaggatcatccgctacgttgcggggactctcgaccacggtctctactacccgaggtgtcctggcaaggcacacttcgtcgggtacagcgacagcgaccacgccggcgacattgacaccagcaagagcacgagcgggattctcttcttcctcggcgagtgcctcgttagctggcagtcaatcaagcagcaggtggtggccctgtccagctgcgaggccgagtacatggcggcatccgccgcttcgacccaggcgctctggcttgctcgactgcttagtgatctcctcggcagagatactggagcggtggagctcagggtggatagcaagtccgctctggccctggcaaagaaccccgtttttcacgaacggagcaagcacatccgggtgaggtaccatttcatccgaagctacttggaggaagggagcatcaaggcgagctacattaacaccaaggaccagcttgcggatttgctcaccaaaccccttgggaggatcaagttccttgagctttgctcccggatcgggatggctcaactttcccacaagacggcgcacaagacttagggggagaatgtaggaataagtcttggctggttggtcttggtcttgtggtgcctttttCctgcttttcagctttctaggacagcatctctttctaggacagcatctctactttcagtttgagatgctctaggacagtttgttgggatgctctgctctaggacagtttgttGggatgctctaggacagcaccctcttagactagcatggctgcatggctgctacaagcagctataaatatgtatccaatcctttttgggaggatatggcttttgtgtttagtgaatgaagaaaaccagaaaattgccccatctcgagtgccatcctcttctcaatgagagtaaccattgaaattCtaacagttacactttgcagcaaaacctccaatccattacccTtacacagatttagaaaggtggtattatcagggttgaagtagccttcggagtttgatgggcacataagaaagaataacagacatatcatatttgttgcctcctggtggctagagctggccagcacaaataaagaaaaatgtactggaaataaaaagggaaatgcaaaatagtaggaaaatgaaaaatattcaagttcataattctgtttaatcattatgcaattaagctcatcttaatcttattgaccatccatatttttatgaaatataaatgcacgggactagtttatcgtgtaattttgttaggaaatttgggtttgaatcagtggaaatgtctgaattagtgcaccactcaaggttatccttgtatcccctgtgctttagcggttattaacttgagtaagtggcaaatacattctttatgttttgctcccatattgctgatttcacttaatttgtcctctctgttctttgggcgattctatttattttctattaccgagtcaaaaagaaatcagtttgagaagcaatgtacgtcttctcctgctgcctgattattaaaaattggatttctaggatgtatttatgaacatcttgtgagactttgtaattttctgaatattttataggtttgggagctcacagcaaataacattattatggtatcagctattggaaatgatggccctcTttatggcacgctaaataacccggctgatcagagtgacgtcattggtgttggtggtattgattacaataaccatatagcttcattttcctctcgaggcatgactacttgggagcttcctcatgggtacattgttcaacttaccagtacactattttcttagtctgtcactgactgttgTttttttccgatatctggatcctgtaggcttgaaaagctaaagctttgtatcatttcattagaacagagtgtacagtatataaaacctgtaagcctagttcagtggTtttgtatatattatcttaaaaaaatttgatggagtttggagtacttacattcgacttatccTtatatattatgttgataaaggtcattgctaggtttgtgcttaccaaacttggcactgcaagtgcacacaaaagatggtcatatgctaattctttttaatcacatactagcaggtcaagtagaattacgtcttactgatgttggtatcacataaagcttttttacaagaatttctcctgagaacttttgtaaatcatattcgataattttattgtagttgaaaatcagaTtgtttgtgatattaaatttatggcaagaaactatttcctgCcccttgaactttaggcatttaattaatatctgtagtAaaaacttgaaatgatgaggcaattttttttggggggggggggggtagcgatgatcaTttttttacaatgccatagtaccatcttctcttgtgctagcttcacagatccttgaatTggcttactcataaggtgtggtttcaataatgcaggtatggccgtgttaaacctgatgttgttgcgtatagtcgtgatataatgggttcaaagatcagcacaggttgtaaaaCcctttcaggcaCcagtgttgcaagcccggtggttgctggtgtagtatgcttgcttgttagtgttataccagaggagcatcggaaatccatccttaaccctgcaacaatgaaacaagcccttgtagagggtgcttctaggctttcaggaccaaacatgtatgagcagggcgctggcaagattgacctgtaagtttcttgtcccTtttaatgtactctttggtatgcctatgattagttggatattcaatacttcttgtatcccatcctttCcaaacagcaaggtttgtccttcaaaatttagaggcagtatatcctgtcaagttggtttgcccttctttctattgtgtgctcaaacagatactcatttattgttttgtctttttccagctggcaatcatacgaaatcttgaaaagttaccaaccgcgtgcaagcatctttcctaatacccttgacttcactgattgtccctatttctggcctttttgccgccaacctctgtatgctggagctatgccagtggtcttcaatgctacaattctgaacgggatgggggtgattggttatgttaaggatcctCctgtatggcagccctctgaggatgtcggcaatattcttagtgttcacttcacctactcagatgtcatatggccttggacaggttatcttgccctgcacttacaagttaaagatgaaggatctcagttttcaggcataatcagtGgcaaggtcacattgtcaatttacagcccagcagcccatggggaaagcagtccacgaagtagttcatgtgttctttacctgaaggtcaaggtggtgccaacacctgttaggtccagaagaatattgtgggaCcaatttcataatatcaaatacccatctggTtttgttccaagagattcacttaatgtgcataatgatatccttgactggcatggcgatcacttgcacacgaattttcatatactgTTcaacatgctgagagatgcaggatactacattgagacccttggatctccacttacctgctttgatgctagcaaTtatgggacactgcttatggttgaccttgaggatgagtacttcagtgaggagattcagaaacttaaggatgatgttgtacacaaaGggcttggcgttgttgTttttgcagagtggtatcatgtcgacacaatggttaagatgacattctttgatgaaaatacacgcagttggtggacTcCaattactgggggtgcaaatgttcctgcacttaatgaacttttggcaccatttggcattgcttttggggacaaagtactaagtggtgacttctcaatcaatggtgagcagacccactatgcttctgggactgatatagtgcaattcccagcaggaggttttttgcatagcttccaactccaggacaactctaaaatttctcaggataactcaagaagcgcagatacacaaaataccccagataaaagcaaggttagtatctattgcgcactatttcacattaTttatctattttcttgaaatgcattctttcaaaatgatggtgtggccattacaatatttctacttgagcaagaacctaatgatgcactataggttgaatagttgtaatatgccatttgatggaggcatgcctggtcatttctcatgaaactgttCcctagatttggtgcctttgtgtcagtgcctcctagtctgtggctctgtgcacatggtattatgattggtaggcaggTtttttcaggaatatcaagttctgagctaaccaatggatggtggtcatgcttaacttgtaataatagtctcttgaactttcatgcaagattttgttggccatataagttgcaagtgttagattcttactaaaatcagttattccaaaaCTTaacttttatttatgagagcccatcaaaagctacgattaggcaaaatatgtaactttccaattgtgaagtttggacccttttatgaccagaattttctcatgtgccatactctgaactgttttttcttatggacatagatagtgatttaaattcagtaaaaggaggatactaatgagtgttctggccagttcattatgctggtagatactccctccgtcccaatatgtagcaacctaggatgggtctaatcccatcctaggttaacatattgggatggaggtgtaataatttgatatttgttttgatcgcaccattttatcatagcccttattttacagtatataatacttgctgtataggtatagtaaggcttaTttTGCTTCTCCTTGGCAGCTCTCTTCTATTCTTGGAATGATGGAAGCAGGCAAAGGTCGGGTTGCAGTCTATGGAGATTCAAATTGCCTTGACAGTAGTCACATGGTAACAAACTGCTATTGGCTTTTGAGAAAACTTGTGGAGTTCACTGGCAATAGAATCAAAGATCCTGTTCTTTTCTCAGAATCTGCTCAGTTAAAATTTCCAGTTTTTGAGAGCATCCATCAACTGTCACGTAGACCAGATGTGAACTTCTCAACATATTCAACTGTCGTTGGCAATGAATTGATCTGTCACCAGGATTCCCGATTTGAGGTTTGGgggaacgaaaggttatggtacccaacaaacaggcacaacaagaaagttgccagagtaccagaaaagtgaagcttacaacatttcaacaccaatagcttctgacagcacaccagatgaagctggcctgcaaagaaatatttcaacaccaatagcttctaagtttgataaaagaatggactattttgGttttctcgggcacgaagaggtatcctgtcttgccttcctctttgtagtggctaacatttgttaagttagcatattgcacttgatcaagcaataactctagtttcttacattttctcagaattctggatccctttatgctgtacaatttgtgcacacgcttagtaatagtaaggttagcatattactgcatgcgttaatctaactatgattatgctataaacttaataataataacagaattttcatggtttactggccatatgttgtgaacggccaccaaatatgtcttgctccagcctgcagctaccatatttaataccttgtacagtttactatcttgcctagactctagagaaatgcacagtgtgatcaagcctcatctcttgcttttacatagaagctagagcacaaaaccaggacactgtcgctagttttgtgcgataggtcaatttgaagaacactggaaaccatatgattaggacttactccgtaagactagagaaacactgtagtgaatgggagcccatttaaccacaataatgttgtttactttgctatgtaaaagtcagaggatatatagcgaggaagtttaatgttctttctctagaacatagagtagatggaaagcttatcatttaatggggttttaggttttgttaggagatattctcatatgctcctataggatttaactattgtggtaacaattctattattttgcagattgacataggaatgctagtggcaagccaatggatggtaccttgctttgctgctactgcctgtaagtaacaaacacttattgaatcttgactactacctctggttttaaacatatggtattcgtcttctctagaaatatttatgcaaactgacaaacatgtaaggcatgcttaaagtaccttttgatgatcgacacattttgttattcaaactttgaagaaaaagtcaatggtgtcaaagtttggtcaatgtgtctggccgatgtatctgatttctgaccttgtaccttgccccaacgcacaggccttatgttgtacctaagttgcagagtgcaacaaaagcgccgacgacgaaagaaggggtcaacagctgctagattgtcaagtatggaccgtatggtctaacatgacatacacacactgttgggggccaggatgaatatatgaatttcggcactcgcattgcaaaccttcatgggaatatacagttcgctccatatacaacagagtggacaggacgtggtgagcttgagttataccggaatttccagatcctgttttcagctcgcaacgggaggcctcttgtcttgaggcacaatttttgcaccgtgactggaggcacatggctcataTtttttttctgagcaaggagctgattcagctgttcggcagcagcatggagaggtatttccacttcaatttcagatggtgcgtattgacatgatgttgTTtgtagttcgtcaaaattttgccaatgtaATaatacgttaattttgacgcacgatcactgagctaattcctttaggaagggactagagctaactatttcattctttgttacctttttactccggatgtctgaaagtgaagggtttcgatcgtctctgtagatcggttagcttgagctgcttgtaagtatagaagaggaaaaggctgtttctttgttacctttttactccggatgccagcaagtcattttcaagttatttcttcagaagttgtctgtctagtagtattatatgcccttggaatttctcgttttctgtttgggttgcgacttgcaaggtttcaaccttttgtttttctcttttaccgagaagagcgcaaacaatcgcattcttctgtcgggtaaaagtagagctaatagtgttcgtcagttattgcactcaaactctacaataaatttgtgctatcagagccaaagaaatttcggcagggtgcattgtacacaagtacatcacctattccag
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| CDS seq | atggcgctggagaggcggctcgcgtacgccgcgctcatcccgttcctccttctcgcgctccccatcctgccgtccgattccccgtccggcggcggcggcggtggcgcgggtgggggtgggggagggggagaaaccctagacccgcccgcggcgaagtacgtggtgcggttcgtcgagtaccggcccgccgacgagcaccgggagtacctggaggacggcctccgcggggccgcgcggcctccccccgccgcgtcgtggcggtgggtggagcggcggaaccccgccgccgcgttccccaccgacttcgccgtgctcgagatccgcgacgcgtgccgcgcggctgtcgtcgacgccgtcagtgcgctcggccgtgtccgggacgtgcacgccgatgcgagctactccaggggcgtcctgtctgcggatcggccgcggcagcaggggaagctgttcacagccatgtcgttcgagggggaggaaggaGggggagatagggaggtcgggtgcagcactgatagtaataattcctcttctgctggttggaggcggaagcttctcgtgcagagatcacaagtaacgtctctttttggagctgaacgactatgggggagaggtttcactggtaggaaagtcaagatggccatttttgacactggtattcgagcagatcatccgcacttccgtaatattaaggagcgcactaattggacaaacgaagacacactaaatgataaccttggacatggaacatttgtagctggagttattgctggtcaagatgcagaatgccctggatttgcacctgacactgagatatatgcatttcgagtgttcacagatgctcagatatcctacacatcgtggttcttggatgcatttaattatgcaattgcaactggtatggatgtactgaatttgagtattggtggacctgattatctggatctcccctttgtggaaaaggtttgggagctcacagcaaataacattattatggtatcagctattggaaatgatggccctcTttatggcacgctaaataacccggctgatcagagtgacgtcattggtgttggtggtattgattacaataaccatatagcttcattttcctctcgaggcatgactacttgggagcttcctcatgggtatggccgtgttaaacctgatgttgttgcgtatagtcgtgatataatgggttcaaagatcagcacaggttgtaaaaCcctttcaggcaCcagtgttgcaagcccggtggttgctggtgtagtatgcttgcttgttagtgttataccagaggagcatcggaaatccatccttaaccctgcaacaatgaaacaagcccttgtagagggtgcttctaggctttcaggaccaaacatgtatgagcagggcgctggcaagattgacctctggcaatcatacgaaatcttgaaaagttaccaaccgcgtgcaagcatctttcctaatacccttgacttcactgattgtccctatttctggcctttttgccgccaacctctgtatgctggagctatgccagtggtcttcaatgctacaattctgaacgggatgggggtgattggttatgttaaggatcctCctgtatggcagccctctgaggatgtcggcaatattcttagtgttcacttcacctactcagatgtcatatggccttggacaggttatcttgccctgcacttacaagttaaagatgaaggatctcagttttcaggcataatcagtGgcaaggtcacattgtcaatttacagcccagcagcccatggggaaagcagtccacgaagtagttcatgtgttctttacctgaaggtcaaggtggtgccaacacctgttaggtccagaagaatattgtgggaCcaatttcataatatcaaatacccatctggTtttgttccaagagattcacttaatgtgcataatgatatccttgactggcatggcgatcacttgcacacgaattttcatatactgTTcaacatgctgagagatgcaggatactacattgagacccttggatctccacttacctgctttgatgctagcaaTtatgggacactgcttatggttgaccttgaggatgagtacttcagtgaggagattcagaaacttaaggatgatgttgtacacaaaGggcttggcgttgttgTttttgcagagtggtatcatgtcgacacaatggttaagatgacattctttgatgaaaatacacgcagttggtggacTcCaattactgggggtgcaaatgttcctgcacttaatgaacttttggcaccatttggcattgcttttggggacaaagtactaagtggtgacttctcaatcaatggtgagcagacccactatgcttctgggactgatatagtgcaattcccagcaggaggttttttgcatagcttccaactccaggacaactctaaaatttctcaggataactcaagaagcgcagatacacaaaataccccagataaaagcaagCTCTCTTCTATTCTTGGAATGATGGAAGCAGGCAAAGGTCGGGTTGCAGTCTATGGAGATTCAAATTGCCTTGACAGTAGTCACATGGTAACAAACTGCTATTGGCTTTTGAGAAAACTTGTGGAGTTCACTGGCAATAGAATCAAAGATCCTGTTCTTTTCTCAGAATCTGCTCAGTTAAAATTTCCAGTTTTTGAGAGCATCCATCAACTGTCACGTAGACCAGATGTGAACTTCTCAACATATTCAACTGTCGTTGGCAATGAATTGATCTGTCACCAGGATTCCCGATTTGAGGTTTGGgggaacgaaaggttatggtacccaacaaacaggcacaacaagaaagttgccagagtaccagaaaagtga
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| Protein seq | MALERRLAYAALIPFLLLALPILPSDSPSGGGGGGAGGGGGGGETLDPPAAKYVVRFVEYRPADEHREYLEDGLRGAARPPPAASWRWVERRNPAAAFPTDFAVLEIRDACRAAVVDAVSALGRVRDVHADASYSRGVLSADRPRQQGKLFTAMSFEGEEGGGDREVGCSTDSNNSSSAGWRRKLLVQRSQVTSLFGAERLWGRGFTGRKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGQDAECPGFAPDTEIYAFRVFTDAQISYTSWFLDAFNYAIATGMDVLNLSIGGPDYLDLPFVEKVWELTANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNNHIASFSSRGMTTWELPHGYGRVKPDVVAYSRDIMGSKISTGCKTLSGTSVASPVVAGVVCLLVSVIPEEHRKSILNPATMKQALVEGASRLSGPNMYEQGAGKIDLWQSYEILKSYQPRASIFPNTLDFTDCPYFWPFCRQPLYAGAMPVVFNATILNGMGVIGYVKDPPVWQPSEDVGNILSVHFTYSDVIWPWTGYLALHLQVKDEGSQFSGIISGKVTLSIYSPAAHGESSPRSSSCVLYLKVKVVPTPVRSRRILWDQFHNIKYPSGFVPRDSLNVHNDILDWHGDHLHTNFHILFNMLRDAGYYIETLGSPLTCFDASNYGTLLMVDLEDEYFSEEIQKLKDDVVHKGLGVVVFAEWYHVDTMVKMTFFDENTRSWWTPITGGANVPALNELLAPFGIAFGDKVLSGDFSINGEQTHYASGTDIVQFPAGGFLHSFQLQDNSKISQDNSRSADTQNTPDKSKLSSILGMMEAGKGRVAVYGDSNCLDSSHMVTNCYWLLRKLVEFTGNRIKDPVLFSESAQLKFPVFESIHQLSRRPDVNFSTYSTVVGNELICHQDSRFEVWGNERLWYPTNRHNKKVARVPEK |
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| Function | Subtilisin-like protease SBT6.1 [UniProtKB/Swiss-Prot:Q0WUG6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_06g0004580 | OsPr106_06g0004580.01 | Chr06 | 3090620 | 3105008 | + | NAM | ||
| CDS seq | atggcgctggagaggcggctcgcgtacgccgcgctcatcccgttcctccttctcgcgctccccatcctgccgtccgattccccgtccggcggcggcggcggtggcgcgggtgggggtgggggagggggagaaaccctagacccgcccgcggcgaagtacgtggtgcggttcgtcgagtaccggcccgccgacgagcaccgggagtacctggaggacggcctccgcggggccgcgcggcctccccccgccgcgtcgtggcggtgggtggagcggcggaaccccgccgccgcgttccccaccgacttcgccgtgctcgagatccgcgacgcgtgccgcgcggctgtcgtcgacgccgtcagtgcgctcggccgtgtccgggacgtgcacgccgatgcgagctactccaggggcgtcctgtctgcggatcggccgcggcagcaggggaagctgttcacagccatgtcgttcgagggggaggaaggaGggggagatagggaggtcgggtgcagcactgatagtaataattcctcttctgctggttggaggcggaagcttctcgtgcagagatcacaagtaacgtctctttttggagctgaacgactatgggggagaggtttcactggtaggaaagtcaagatggccatttttgacactggtattcgagcagatcatccgcacttccgtaatattaaggagcgcactaattggacaaacgaagacacactaaatgataaccttggacatggaacatttgtagctggagttattgctggtcaagatgcagaatgccctggatttgcacctgacactgagatatatgcatttcgagtgttcacagatgctcagatatcctacacatcgtggttcttggatgcatttaattatgcaattgcaactggtatggatgtactgaatttgagtattggtggacctgattatctggatctcccctttgtggaaaaggtttgggagctcacagcaaataacattattatggtatcagctattggaaatgatggccctcTttatggcacgctaaataacccggctgatcagagtgacgtcattggtgttggtggtattgattacaataaccatatagcttcattttcctctcgaggcatgactacttgggagcttcctcatgggtatggccgtgttaaacctgatgttgttgcgtatagtcgtgatataatgggttcaaagatcagcacaggttgtaaaaCcctttcaggcaCcagtgttgcaagcccggtggttgctggtgtagtatgcttgcttgttagtgttataccagaggagcatcggaaatccatccttaaccctgcaacaatgaaacaagcccttgtagagggtgcttctaggctttcaggaccaaacatgtatgagcagggcgctggcaagattgacctctggcaatcatacgaaatcttgaaaagttaccaaccgcgtgcaagcatctttcctaatacccttgacttcactgattgtccctatttctggcctttttgccgccaacctctgtatgctggagctatgccagtggtcttcaatgctacaattctgaacgggatgggggtgattggttatgttaaggatcctCctgtatggcagccctctgaggatgtcggcaatattcttagtgttcacttcacctactcagatgtcatatggccttggacaggttatcttgccctgcacttacaagttaaagatgaaggatctcagttttcaggcataatcagtGgcaaggtcacattgtcaatttacagcccagcagcccatggggaaagcagtccacgaagtagttcatgtgttctttacctgaaggtcaaggtggtgccaacacctgttaggtccagaagaatattgtgggaCcaatttcataatatcaaatacccatctggTtttgttccaagagattcacttaatgtgcataatgatatccttgactggcatggcgatcacttgcacacgaattttcatatactgTTcaacatgctgagagatgcaggatactacattgagacccttggatctccacttacctgctttgatgctagcaaTtatgggacactgcttatggttgaccttgaggatgagtacttcagtgaggagattcagaaacttaaggatgatgttgtacacaaaGggcttggcgttgttgTttttgcagagtggtatcatgtcgacacaatggttaagatgacattctttgatgaaaatacacgcagttggtggacTcCaattactgggggtgcaaatgttcctgcacttaatgaacttttggcaccatttggcattgcttttggggacaaagtactaagtggtgacttctcaatcaatggtgagcagacccactatgcttctgggactgatatagtgcaattcccagcaggaggttttttgcatagcttccaactccaggacaactctaaaatttctcaggataactcaagaagcgcagatacacaaaataccccagataaaagcaagCTCTCTTCTATTCTTGGAATGATGGAAGCAGGCAAAGGTCGGGTTGCAGTCTATGGAGATTCAAATTGCCTTGACAGTAGTCACATGGTAACAAACTGCTATTGGCTTTTGAGAAAACTTGTGGAGTTCACTGGCAATAGAATCAAAGATCCTGTTCTTTTCTCAGAATCTGCTCAGTTAAAATTTCCAGTTTTTGAGAGCATCCATCAACTGTCACGTAGACCAGATGTGAACTTCTCAACATATTCAACTGTCGTTGGCAATGAATTGATCTGTCACCAGGATTCCCGATTTGAGGTTTGGgggaacgaaaggttatggtacccaacaaacaggcacaacaagaaagttgccagagtaccagaaaagtga
More
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| Protein seq | MALERRLAYAALIPFLLLALPILPSDSPSGGGGGGAGGGGGGGETLDPPAAKYVVRFVEYRPADEHREYLEDGLRGAARPPPAASWRWVERRNPAAAFPTDFAVLEIRDACRAAVVDAVSALGRVRDVHADASYSRGVLSADRPRQQGKLFTAMSFEGEEGGGDREVGCSTDSNNSSSAGWRRKLLVQRSQVTSLFGAERLWGRGFTGRKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGQDAECPGFAPDTEIYAFRVFTDAQISYTSWFLDAFNYAIATGMDVLNLSIGGPDYLDLPFVEKVWELTANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNNHIASFSSRGMTTWELPHGYGRVKPDVVAYSRDIMGSKISTGCKTLSGTSVASPVVAGVVCLLVSVIPEEHRKSILNPATMKQALVEGASRLSGPNMYEQGAGKIDLWQSYEILKSYQPRASIFPNTLDFTDCPYFWPFCRQPLYAGAMPVVFNATILNGMGVIGYVKDPPVWQPSEDVGNILSVHFTYSDVIWPWTGYLALHLQVKDEGSQFSGIISGKVTLSIYSPAAHGESSPRSSSCVLYLKVKVVPTPVRSRRILWDQFHNIKYPSGFVPRDSLNVHNDILDWHGDHLHTNFHILFNMLRDAGYYIETLGSPLTCFDASNYGTLLMVDLEDEYFSEEIQKLKDDVVHKGLGVVVFAEWYHVDTMVKMTFFDENTRSWWTPITGGANVPALNELLAPFGIAFGDKVLSGDFSINGEQTHYASGTDIVQFPAGGFLHSFQLQDNSKISQDNSRSADTQNTPDKSKLSSILGMMEAGKGRVAVYGDSNCLDSSHMVTNCYWLLRKLVEFTGNRIKDPVLFSESAQLKFPVFESIHQLSRRPDVNFSTYSTVVGNELICHQDSRFEVWGNERLWYPTNRHNKKVARVPEK
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_06g0004580 | OsPr106_06g0004580.02 | Chr06 | 3090626 | 3104753 | + | IsoSeq | ||
| CDS seq | atgaatttcggcactcgcattgcaaaccttcatgggaatatacagttcgctccatatacaacagagtggacaggacgtggtgagcttgagttataccggaatttccagatcctgttttcagctcgcaacgggaggcctcttgtcttgaggcacaatttttgcaccgtgactggaggcacatggctcataTttttt |
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| Protein seq | MNFGTRIANLHGNIQFAPYTTEWTGRGELELYRNFQILFSARNGRPLVLRHNFCTVTGGTWLIFF |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr06 | 3092432 | 3092787 | + | OsPr106_06g0004580.02 | OsPr106_06g0004580.01,OsPr106_06g0004580.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.100363 | 9.305385 | 11.436358 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0163500 | RBH | 1.090146 | 0.837566 | 3.906707 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g06810 | RBH | 0.671145 | 0.512847 | 0.915536 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0163500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0004700 | RBH | 0.442023 | 6.536257 | 3.070749 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0004620 | RBH | 0.322271 | 1.177737 | 1.326367 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0004550 | RBH | 1.414528 | 2.303757 | 6.219182 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0004670 | RBH | 0.173444 | 0.154345 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0055200 | RBH | 3.9363165 | 9.971484 | 14.8908145 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0004460 | RBH | 0.198469 | 0.322911 | 0.542716 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0055300 | RBH | 4.5969905 | 11.7006355 | 12.519036 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0004700 | RBH | 0.221019 | 0.102926 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0004560 | RBH | 0.333041 | 6.544498 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0004610 | RBH | 1.223124 | 22.488171 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0004580 | RBH | 0.000000 | 0.438786 | 0.297320 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0004460 | RBH | 0.272584 | 1.489488 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G004370 | RBH | 0.521378 | 1.153090 | 1.235814 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0004610 | RBH | 1.234287 | 6.532220 | 6.239560 |
