Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_06g0002770 | OGI:06005800 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr06:1963627-1966874 | ||||||||
| Gene Symbol | RLP1, OsRLP1, SEPK1 | ||||||||||
| DNA seq | cgtgtacaggcccacttcactaatctaaaagaattaaagaagtacacttcactggaagtctggaacatcagaacccaacaaacatcggcacacattagtcatttagtatctctcttgtttgtgtgttgctgccattgtctatcacacaccacctagcaattgtttcaatacaaactaaacgcaacaccaaaatgaagaagaattcatgaagaaagtggacataaaagaagactcatacagacagactctacataagctgatgcacattcttgtccagtcattaagacgaatttagaatgatgtgcaaacgccattgcatatttgatttttttttttaagccagcagtttcaagggcaaactttcacaataccgaactttttcccactgttttcttattcaccttcttctccagtaggatcatccagtgaataactttctcacatgtggagtcgacgaactggaaatacctcttgcccactgccttgctgcacacaagaagccaccacacagaagaaaatcctactccgaagcccaatcctgaaaatatatacagccagatatcatggacatcattatgctctgcttgatcaacatggttatctttctgttcaaaacagctgccagaagcaagatggatgcagagatacttgttgccagcatagatgtatggatcttcatcaccaagggtttgaagctgagagccctggggtaccatcccggacagattgttgtaggacatgttcaggtggctcaacaagtgcagtgatgtcatgctttcaggaattatgcctgacagtcggttccatgagagatcaagcgactccaatgaactcatattaccaattgtctctggaatatgaccactcaggagatttttcgagagattcaggtttttgagccctacaagatctccaacttcagcaggaattccacctgttagataattgttagaaaggtcaatgctcttcatcagataaaggatcttagaatacaatctttcttctcctttgatggtaatgtatagactctcattgtgatagagagatccaccaaaactatcaccagaaatctgcatcggtataatatgtcttgacctctgtgaagccatttcactaaaatttccaataccttgtggcaggggccctgacagcttgttattggcaagatccaacacttgaagaccttgaagctgtgacaattcagacgggatgcttccagtgaaacgatttgatcgcaaacgaagaatcatgaggtattgcatgttatctcctatccattcaggtatggaaccctccaaattattatctccaatatcaaggaaaaccagaagcccgcatgaacttagagaggaaggcaacaacccagatagcctattgttgttcaaatgcagggaaccaagaaaagtaagagagccaagacttgaaggtatgtgtccttccaggttgttgtacgagaaatccaccaaaaatagttctgtgctgttcttccaacaattaggtagctcgcctgataagctgttgtttgataggtctattgctgacaaccatggcatgttgcaaaagtacgcaggtatgcttctatttagacgattgcttgacaataaaatgtaacgtgtcttgttccctcccacactattgggcaatgatccagataaagagttgttggagagatctagcaggtctagactttctggcatatcaggaatctgaccttccaattggttcgagctgagccccaagaactgcagtgacttcatatgaaccagggatgctggtagcatgccagtaagcagattgtcagagagatccaagttaatgagagaggtcaatgacgtccaaagccaatcaggcaattgacctagagtccccgttctgtgcaaatctaatgtctgcattccaacttgtgtttgaagccactgcgggacttgtgattgtagtggggaagaacctaaaaggagttcataaagttgaaagggtggtaaccaatttgctcccacagaaattctcaaggaattgtaagataaatctagcttttttagcttagttagatttgttaggtgttgttcagacaagacatcttcgagtgaattgtgagaaaggtccagttcaattaactctgtgagctgactgatattggtatgtacatgacctgatagtgagtttttgctgagatcgactgagaagaggtttgggaaggatccaatccacccggatagacttccagatagattattattccccaatttgatcatagatagtcccttcatgcagcgggtcattgccttccccaaatcagcaatatcacctataaggttgttgttcgacaaatcaaggatctgcaagttacacaacttagatattggaattgctccaatcaaactgttgtcagccaagtaaagggtattaagggcagttaaatttcccacagattcaggaattgagccatgcagctcacaatagtccaaattaattaatgacagagtgtatatgcttgccaaccaattcgggaatctagagctgaagttgttgcctgatagatcaatttcattgagaactgtgaagttagactgggatagagaattttgattagtgggtggaagattggtaccagacaaacgaagcactttgagggaagcaagcatgttcaaagactgcagccaatctgaagccacagaaaggttccacaatgacatgtcaaggtaaaccagtgaagaaagctgagagacccaaagaagattgtcaacagagctactggaagtaaagctgctaaagttgttataaggaaagctaatatccaggtaattcagcttagataagtttccaagctgaGggggaattttcccaccgaaattagcaaaggacaagtcaagatgcctcaggttcttcagagatcctatgaacgcagggattcttgcacctccaaaatcattcgaacgaagattgaggtacatcaaatgagttaaatgaaccaatgatggactgatgtcacctgttagagcatcctccttgctgatattatagtttgcgaggttgagcttgataatatgtccagtcctgttgttgcaagtcacgccataccagttgcaacaatttagacctacccaagaggacagcatgcctccagggtctctcagggtggccttcaagtcgaatagtgcatctctttcctttccaatgcatgctgctgctgctgtgattttggaggccaccagcaacaggggcaacaaagaaatcagtgcaaggcgcat
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| CDS seq | atgcgccttgcactgatttctttgttgcccctgttgctggtggcctccaaaatcacagcagcagcagcatgcattggaaaggaaagagatgcactattcgacttgaaggccaccctgagagaccctggaggcatgctgtcctcttgggtaggtctaaattgttgcaactggtatggcgtgacttgcaacaacaggactggacatattatcaagctcaacctcgcaaactataatatcagcaaggaggatgctctaacaggtgacatcagtccatcattggttcatttaactcatttgatgtacctcaatcttcgttcgaatgattttggaggtgcaagaatccctgcgttcataggatctctgaagaacctgaggcatcttgacttgtcctttgctaatttcggtgggaaaattccccCtcagcttggaaacttatctaagctgaattacctggatattagctttccttataacaactttagcagctttacttccagtagctctgttgacaatcttctttgggtctctcagctttcttcactggtttaccttgacatgtcattgtggaacctttctgtggcttcagattggctgcagtctttgaacatgcttgcttccctcaaagtgcttcgtttgtctggtaccaatcttccacccactaatcaaaattctctatcccagtctaacttcacagttctcaatgaaattgatctatcaggcaacaacttcagctctagattcccgaattggttggcaagcatatacactctgtcattaattaatttggactattgtgagctgcatggctcaattcctgaatctgtgggaaatttaactgcccttaataccctttacttggctgacaacagtttgattggagcaattccaatatctaagttgtgtaacttgcagatccttgatttgtcgaacaacaaccttataggtgatattgctgatttggggaaggcaatgacccgctgcatgaagggactatctatgatcaaattggggaataataatctatctggaagtctatccgggtggattggatccttcccaaacctcttctcagtcgatctcagcaaaaactcactatcaggtcatgtacataccaatatcagtcagctcacagagttaattgaactggacctttctcacaattcactcgaagatgtcttgtctgaacaacacctaacaaatctaactaagctaaaaaagctagatttatcttacaattccttgagaatttctgtgggagcaaattggttaccaccctttcaactttatgaactccttttaggttcttccccactacaatcacaagtcccgcagtggcttcaaacacaagttggaatgcagacattagatttgcacagaacggggactctaggtcaattgcctgattggctttggacgtcattgacctctctcattaacttggatctctctgacaatctgcttactggcatgctaccagcatccctggttcatatgaagtcactgcagttcttggggctcagctcgaaccaattggaaggtcagattcctgatatgccagaaagtctagacctgctagatctctccaacaactctttatctggatcattgcccaatagtgtgggagggaacaagacacgttacattttattgtcaagcaatcgtctaaatagaagcatacctgcgtacttttgcaacatgccatggttgtcagcaatagacctatcaaacaacagcttatcaggcgagctacctaattgttggaagaacagcacagaactatttttggtggatttctcgtacaacaacctggaaggacacataccttcaagtcttggctctcttacttttcttggttccctgcatttgaacaacaataggctatctgggttgttgccttcctctctaagttcatgcgggcttctggttttccttgatattggagataataatttggagggttccatacctgaatggataggagataacatgcaatacctcatgattcttcgtttgcgatcaaatcgtttcactggaagcatcccgtctgaattgtcacagcttcaaggtcttcaagtgttggatcttgccaataacaagctgtcagggcccctgccacaaggtattggaaattttagtgaaatggcttcacagaggtcaagacatattataccgatgcagatttctggtgatagttttggtggatctctctatcacaatgagagtctatacattaccatcaaaggagaagaaagattgtattctaagatcctttatctgatgaagagcattgacctttctaacaattatctaacaggtggaattcctgctgaagttggagatcttgtagggctcaaaaacctgaatctctcgaaaaatctcctgagtggtcatattccagagacaattggtaatatgagttcattggagtcgcttgatctctcatggaaccgactgtcaggcataattcctgaaagcatgacatcactgcacttgttgagccacctgaacatgtcctacaacaatctgtccgggatggtaccccagggctctcagcttcaaacccttggtgatgaagatccatacatctatgctggcaacaagtatctctgcatccatcttgcttctggcagctgttttgaacagaaagataaccatgttgatcaagcagagcataatgatgtccatgatatctggctgtatatattttcaggattgggcttcggagtaggattttcttctgtgtggtggcttcttgtgtgcagcaaggcagtgggcaagaggtatttccagttcgtcgactccacatgtgagaaagttattcactggatgatcctactggagaagaaggtgaataagaaaacagtgggaaaaagttcggtattgtga
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| Protein seq | MRLALISLLPLLLVASKITAAAACIGKERDALFDLKATLRDPGGMLSSWVGLNCCNWYGVTCNNRTGHIIKLNLANYNISKEDALTGDISPSLVHLTHLMYLNLRSNDFGGARIPAFIGSLKNLRHLDLSFANFGGKIPPQLGNLSKLNYLDISFPYNNFSSFTSSSSVDNLLWVSQLSSLVYLDMSLWNLSVASDWLQSLNMLASLKVLRLSGTNLPPTNQNSLSQSNFTVLNEIDLSGNNFSSRFPNWLASIYTLSLINLDYCELHGSIPESVGNLTALNTLYLADNSLIGAIPISKLCNLQILDLSNNNLIGDIADLGKAMTRCMKGLSMIKLGNNNLSGSLSGWIGSFPNLFSVDLSKNSLSGHVHTNISQLTELIELDLSHNSLEDVLSEQHLTNLTKLKKLDLSYNSLRISVGANWLPPFQLYELLLGSSPLQSQVPQWLQTQVGMQTLDLHRTGTLGQLPDWLWTSLTSLINLDLSDNLLTGMLPASLVHMKSLQFLGLSSNQLEGQIPDMPESLDLLDLSNNSLSGSLPNSVGGNKTRYILLSSNRLNRSIPAYFCNMPWLSAIDLSNNSLSGELPNCWKNSTELFLVDFSYNNLEGHIPSSLGSLTFLGSLHLNNNRLSGLLPSSLSSCGLLVFLDIGDNNLEGSIPEWIGDNMQYLMILRLRSNRFTGSIPSELSQLQGLQVLDLANNKLSGPLPQGIGNFSEMASQRSRHIIPMQISGDSFGGSLYHNESLYITIKGEERLYSKILYLMKSIDLSNNYLTGGIPAEVGDLVGLKNLNLSKNLLSGHIPETIGNMSSLESLDLSWNRLSGIIPESMTSLHLLSHLNMSYNNLSGMVPQGSQLQTLGDEDPYIYAGNKYLCIHLASGSCFEQKDNHVDQAEHNDVHDIWLYIFSGLGFGVGFSSVWWLLVCSKAVGKRYFQFVDSTCEKVIHWMILLEKKVNKKTVGKSSVL |
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| Function | Receptor-like protein EIX2 [UniProtKB/Swiss-Prot:Q6JN46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_06g0002770 | OsPr106_06g0002770.01 | Chr06 | 1963627 | 1966874 | - | NAM | ||
| CDS seq | atgcgccttgcactgatttctttgttgcccctgttgctggtggcctccaaaatcacagcagcagcagcatgcattggaaaggaaagagatgcactattcgacttgaaggccaccctgagagaccctggaggcatgctgtcctcttgggtaggtctaaattgttgcaactggtatggcgtgacttgcaacaacaggactggacatattatcaagctcaacctcgcaaactataatatcagcaaggaggatgctctaacaggtgacatcagtccatcattggttcatttaactcatttgatgtacctcaatcttcgttcgaatgattttggaggtgcaagaatccctgcgttcataggatctctgaagaacctgaggcatcttgacttgtcctttgctaatttcggtgggaaaattccccCtcagcttggaaacttatctaagctgaattacctggatattagctttccttataacaactttagcagctttacttccagtagctctgttgacaatcttctttgggtctctcagctttcttcactggtttaccttgacatgtcattgtggaacctttctgtggcttcagattggctgcagtctttgaacatgcttgcttccctcaaagtgcttcgtttgtctggtaccaatcttccacccactaatcaaaattctctatcccagtctaacttcacagttctcaatgaaattgatctatcaggcaacaacttcagctctagattcccgaattggttggcaagcatatacactctgtcattaattaatttggactattgtgagctgcatggctcaattcctgaatctgtgggaaatttaactgcccttaataccctttacttggctgacaacagtttgattggagcaattccaatatctaagttgtgtaacttgcagatccttgatttgtcgaacaacaaccttataggtgatattgctgatttggggaaggcaatgacccgctgcatgaagggactatctatgatcaaattggggaataataatctatctggaagtctatccgggtggattggatccttcccaaacctcttctcagtcgatctcagcaaaaactcactatcaggtcatgtacataccaatatcagtcagctcacagagttaattgaactggacctttctcacaattcactcgaagatgtcttgtctgaacaacacctaacaaatctaactaagctaaaaaagctagatttatcttacaattccttgagaatttctgtgggagcaaattggttaccaccctttcaactttatgaactccttttaggttcttccccactacaatcacaagtcccgcagtggcttcaaacacaagttggaatgcagacattagatttgcacagaacggggactctaggtcaattgcctgattggctttggacgtcattgacctctctcattaacttggatctctctgacaatctgcttactggcatgctaccagcatccctggttcatatgaagtcactgcagttcttggggctcagctcgaaccaattggaaggtcagattcctgatatgccagaaagtctagacctgctagatctctccaacaactctttatctggatcattgcccaatagtgtgggagggaacaagacacgttacattttattgtcaagcaatcgtctaaatagaagcatacctgcgtacttttgcaacatgccatggttgtcagcaatagacctatcaaacaacagcttatcaggcgagctacctaattgttggaagaacagcacagaactatttttggtggatttctcgtacaacaacctggaaggacacataccttcaagtcttggctctcttacttttcttggttccctgcatttgaacaacaataggctatctgggttgttgccttcctctctaagttcatgcgggcttctggttttccttgatattggagataataatttggagggttccatacctgaatggataggagataacatgcaatacctcatgattcttcgtttgcgatcaaatcgtttcactggaagcatcccgtctgaattgtcacagcttcaaggtcttcaagtgttggatcttgccaataacaagctgtcagggcccctgccacaaggtattggaaattttagtgaaatggcttcacagaggtcaagacatattataccgatgcagatttctggtgatagttttggtggatctctctatcacaatgagagtctatacattaccatcaaaggagaagaaagattgtattctaagatcctttatctgatgaagagcattgacctttctaacaattatctaacaggtggaattcctgctgaagttggagatcttgtagggctcaaaaacctgaatctctcgaaaaatctcctgagtggtcatattccagagacaattggtaatatgagttcattggagtcgcttgatctctcatggaaccgactgtcaggcataattcctgaaagcatgacatcactgcacttgttgagccacctgaacatgtcctacaacaatctgtccgggatggtaccccagggctctcagcttcaaacccttggtgatgaagatccatacatctatgctggcaacaagtatctctgcatccatcttgcttctggcagctgttttgaacagaaagataaccatgttgatcaagcagagcataatgatgtccatgatatctggctgtatatattttcaggattgggcttcggagtaggattttcttctgtgtggtggcttcttgtgtgcagcaaggcagtgggcaagaggtatttccagttcgtcgactccacatgtgagaaagttattcactggatgatcctactggagaagaaggtgaataagaaaacagtgggaaaaagttcggtattgtga
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| Protein seq | MRLALISLLPLLLVASKITAAAACIGKERDALFDLKATLRDPGGMLSSWVGLNCCNWYGVTCNNRTGHIIKLNLANYNISKEDALTGDISPSLVHLTHLMYLNLRSNDFGGARIPAFIGSLKNLRHLDLSFANFGGKIPPQLGNLSKLNYLDISFPYNNFSSFTSSSSVDNLLWVSQLSSLVYLDMSLWNLSVASDWLQSLNMLASLKVLRLSGTNLPPTNQNSLSQSNFTVLNEIDLSGNNFSSRFPNWLASIYTLSLINLDYCELHGSIPESVGNLTALNTLYLADNSLIGAIPISKLCNLQILDLSNNNLIGDIADLGKAMTRCMKGLSMIKLGNNNLSGSLSGWIGSFPNLFSVDLSKNSLSGHVHTNISQLTELIELDLSHNSLEDVLSEQHLTNLTKLKKLDLSYNSLRISVGANWLPPFQLYELLLGSSPLQSQVPQWLQTQVGMQTLDLHRTGTLGQLPDWLWTSLTSLINLDLSDNLLTGMLPASLVHMKSLQFLGLSSNQLEGQIPDMPESLDLLDLSNNSLSGSLPNSVGGNKTRYILLSSNRLNRSIPAYFCNMPWLSAIDLSNNSLSGELPNCWKNSTELFLVDFSYNNLEGHIPSSLGSLTFLGSLHLNNNRLSGLLPSSLSSCGLLVFLDIGDNNLEGSIPEWIGDNMQYLMILRLRSNRFTGSIPSELSQLQGLQVLDLANNKLSGPLPQGIGNFSEMASQRSRHIIPMQISGDSFGGSLYHNESLYITIKGEERLYSKILYLMKSIDLSNNYLTGGIPAEVGDLVGLKNLNLSKNLLSGHIPETIGNMSSLESLDLSWNRLSGIIPESMTSLHLLSHLNMSYNNLSGMVPQGSQLQTLGDEDPYIYAGNKYLCIHLASGSCFEQKDNHVDQAEHNDVHDIWLYIFSGLGFGVGFSSVWWLLVCSKAVGKRYFQFVDSTCEKVIHWMILLEKKVNKKTVGKSSVL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.322301 | 0.0 | 0.696281 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0274300 | SBH | 3.931244 | 1.311950 | 2.740619 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g04810 | RBH | 0.0 | 0.0 | 0.047292 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0274300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0002920 | RBH | 0.0 | 1.599792 | 0.195260 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0002850 | RBH | 0.0 | 0.330000 | 0.196129 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0002790 | RBH | 0.0 | 0.0 | 0.203172 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0002760 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0002790 | SBH | 0.0 | 0.000000 | 1.939979 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0033500 | RBH | 0.1444865 | 0.3741335 | 0.362553 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0002710 | RBH | 0.000000 | 0.058883 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0034000 | RBH | 1.7467815 | 3.0741775 | 6.6899185 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0002840 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0002710 | RBH | 0.0 | 0.543997 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0002730 | RBH | 0.0 | 2.317998 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0025540 | RBH | 0.078079 | 0.0 | 1.404008 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0002600 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G002660 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0002830 | RBH | 0.0 | 2.294092 | 0.0 |
