Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_05g0021420 OGI:05064760 | 16/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr05:24860620-24866318
Gene Symbol OsRPK1
DNA seq

ctacttgggcttgacctcgaaatagggcatgtaatccgacgcgccgtcgccggcgtacgatccccggctgatctccacgtcgctgtaggggtgcgccggcgggccaccgccgccgccgccgccgcggtagcggtcgaactcgttggcggacgggtcggcggagctgtccccctccccggcgccggcgtcgtcgggctcgttctgcagcatggcctcgatctccttcaccacggcgcccatggccgggcgcgccgccgccgactcgtcgacgcaccgcatcgccagctgcacgaaccgccggaacacgggggtgcgcgccgcgtcgcggatggccgggtcgacgatcccgcggaggccgtagtggtggtcgtggtcggccgggtcgatggccagccgcacctcccgcactacgtaccgccccttctcgatcggctgcctcccgctcaccagctccagcatcaccaccccgaagctgtacacgtcgctcttctccgacagctgctgcgtcatgtagtactccgggtccaggtagccctagccacatcccatcgattttattaccatttgtttcaatcttgattgttttctttatactatcagatcaaattaagcatatctatttcaattggtcctcaagatgttcgtcgaattttactgaagcgaacctaaaagttcagttatgtcaggagacttgcagaagtggttagtagggtgaattttatcaatttgtcatgagattggaagaagtggttagtaaggtgaattttatcgatttattttgagattgggagaagtggttagtaaggtgaagtgcaatgggtacatgcttagttaccatatttacttcaagtttgatttcaaattaagcatatcgattttgattggttctcaagatgttagtagatttttattagtgagtactgaagtgaggctcaaaattcagttctgtcaggagattggcatgagcggatagtgaggggaatttaccagtgttcccttgacttgggtggagacatggcccttctcagtgtcggccacgagcttggagagcccgaagtcggcaaccttggccttgaggttgttgtcgaggaggatgttggtggacttgatgtcgcggtggatgatcggtgggtcagcgagctcgtgcaggtaggcaagccctctggccgagccaagcgcgatcctcagcctcttcttccagtccaagtacgtcccacttcctgcaaatcaaaaccttttcagttaacatttgataaaagaatcattttagcaatgcaaacgaaatggcgaaataaaatgtgtaatcagattcatggcaatgttaattatgggatgtggatttacccgtcaagttctctctgagtgtgccattggagatgtactcgtagacgagcatctgttcaccttgctcgtagcagaagccaatgaggctgaccaggttgcggtggtgcaccctggacagcagctcgatctcgttcttgaactccacagcgccctgcattgagttgcggtctgcacgcttgatggcgacacaggttccgtcaccgagaatccctctgtacaccttcccgtagcctcctgacccgatctcgtggttgtcagagaagttgttggtgcagatcttgagctcgtcaaaggagaagaaccttgctcccttcagctgtggagcccctccactgtccttctggccagcagcccatgaagctgaaaattttggatcagaaaacaggttcagttgtttcagaacttcttgatcttgtcagtttattccagtagtagcatgcagtaggatgctgctgcttgtagctgttaatgtgtccctgacaaattgcttggtggcattgcagtgacatgatacctatgagcttttagatccttaccaaaagggtctgctctttccttgagttccttagcccttctcttctgtcggagagcaaacaatgacatgaaaatgagggcgataacaaggaccccaccggctactgcaattccagctatggcacctgtgctcatcttggattttttgccaccaagagcaactggcacacacaaaatcagagtgagcaatcctcacaccactatatactagtacttttgtgcaaatactaaactctccgacataaaatagcagagtccttttagcatctcattaattgcaatttagaagtaaaaaattaaaactttcaagataccaaccctcagataacgaaatgtggtatttcctaagctgtaattttgatacctctgcattctcaaagggaaaactaaaactacttcagtgcaaataaagtgggagtctcgacacagtgaaatccaagtacctgccaagggggcatatgggtctgcaatgaagaaataaggtccaaaatttgctggtggtttgtaaatctggttactgagagaagaaccaatccttgtcaattctgacaggttgaaggtcaccccggatgttgggaacagcttcacttgaacttggaggtagttgtcactgttgaagtggatgtctgagagagcgactgagccagggagcaggttcagctttgccgccatggtcgactccagcagctggaacggtgtactgctcaccaagtcgacgaagaagggtgccctgaaaaccatcttgccgttgtatgagaaagcacagccgcagcttgcagggttcacgttctgaccatcactgcactgagctgagccgcatttttccatactggtactgtatgggctcgcgttctgtagctgcctgctgcagaaggctctgttgttgggatcttgctcggcacaaaacggattacctgccaggctgcagacaggatatggcatgagaagtgaggcaatgttggtgaaaggtaggagagaagacgaagattgtatggtgttcttggttcttattgagtttgcaggttcttacagcagagttttcttgtagcttgcagtatcggtagaaactattcggttgtccatgagatttactgtctgcagtgagctgctgatgttgcctgtaatttcaagtgtcccgttgaattggttgttgctcagcacactgtccgattggccacaaaataggcagagataagacacttttttttaaagcttatatgttgagttgtaagttaccagaaaattacacttgctgcagtgtgggcaatgtgaagagcccctttgggacctggccagaaagacttccagaaactattgaactgagtgatcaaaacatatagagatgagtatgaaattgtcatcacaagacgacacaaaatttaaaattccaaaagttttggataactcacacagaagcaagagatgttaaagatgtgaaccagctgggggccactgaaggatcaaatgtgttgttgctcaaatccctggcaattcaagagtggaatctttagttatgcagacaaattatatgattggatgatgaggcatgggggtggttagtttcttacacaacattcaagttggtcatgttgctgagatctggcactgatccagttagcttgttgtttgctaagttcctgcagaagataacattttcaagagaggtgcctcaagtgtcataattcttcctttaagatcagatgtcacttacagctcattcagtttgaccaaactgccaattgtagcaggtattgctcccgtaaaaccattcctatccaatcggctgtcaaagatacaaaagcaagtcaaagatatgaccaattttttttggagaaaataaaaggatgagttccacctatgtgaactttcaagatacttacagaacttcaagtgtactaacagtcccaacctcagctgggattgagcctgagaatttgttgctatcaaacaaactgatgagatagggagagatgttagcaagatatatctattcagtattcatattagacatgaaaatttgtcgatcccttacatgtgtatgagagtcatattggagttgaaaagtccagtaagcgttccagttaactggttcttgttgaaatggctgttcatcaatttgaagtttggagcaaaacaatcaattgtaagtacttacatattctgatatttctcaattgataataccataaagtaagattaaaattacttacaagtgctgcgttttgacaagttggtccaggcctggtgatgttgatgttgagatggggacagatccagtgagttgattatcagccaggtctagccataagaggtttgtgagtacgccaatcgaagacggtattccaccactaaacttgtttgaattcaaggccctatagagaatggcacgaattcattatgtcaatccactcaaaagaaaagaaaaaagggtttatcatctgagctgtggaccaggtatatccacttacaagaacccaagtttccgcaggttgcctattgctattggaatgtttccagtgaagctgcaaccagctaagatcctgacaattacacagcatttgtgcacatcagtaagaaagtttggtatttctgattggaaaaagtagtgttgacaacaatgggcagtgcggcgcatacagtgtcgtaagctccccaaggttcccaatctcagctggcagcggaccaccgagattgatgttgaaggaaagatccctgcaagtgtttctgttatcagctactactactagactatttcttcttagacaaattagttgtactccagaactttgtcacggatcatttcatccaggtacgtttgctattgataatttaacttcaagtgtagtatcttgtttctttcttttggtaagaaatgagcctaatccatgtcacattgcgaaaatagtcaaagcttcagatatttcatccagatctatttactattgtaacttggcatcatatctttgtttctttcatttggtaagaaatgaacctaatccatgtcacattgccgaaatagtcaaagcttaagattggtaaacatgaactggtcagctgaactaagcctcaagaaaaaaaaaagcagagttcataaactagaagcaaactgttctgacaatctgccccttgactggttcaatcagaagttcctagcctgattgcctgaattcacaatctgaactgctacagaagcatgaacaaaatttcgaaaatcccaagttcatagcctgcaaaatcatgctgttttgcacttttgctaagctgggtgatgaactgatgatagaagaaggcgcttacaggtacgtgagctggccgagctggccgatgctgctgctcagtgttccctgcaggctgacgcttgacagcctcctgcaaaaaccagagacatccatggcacgatttcagaggaaggcccatcacatgatattggtggtaggaggagaaggagatggctgtaacttacagcgtcgtcaccctgccgttggtgcacatgatgccgtcccatccgccgccgcaggggtcgccggagttccagctcaacgggtagttcgtccattggctcttcagcccctcgagcgccgcagctgcacgcatgcatgcccaagaagaagatcatcaacaccagcaacaaaaaccaagcgattcttctccgggcaagaagatcctgcctgactttagaatcatctatggaagaaacggaggtgatcgccggcggcgaggcaagagcactcaccgtcctgggcgttggtctggcacaacaccgccggcacgcccgccgccaccaccaccagcgcaagcgccatcaacacccgcggctccat

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CDS seq

atggagccgcgggtgttgatggcgcttgcgctggtggtggtggcggcgggcgtgccggcggtgttgtgccagaccaacgcccaggacgctgcggcgctcgaggggctgaagagccaatggacgaactacccgttgagctggaactccggcgacccctgcggcggcggatgggacggcatcatgtgcaccaacggcagggtgacgacgctgaggctgtcaagcgtcagcctgcagggaacactgagcagcagcatcggccagctcggccagctcacgtacctggatctttccttcaacatcaatctcggtggtccgctgccagctgagattgggaaccttggggagcttacgacactgatcttagctggttgcagcttcactggaaacattccaatagcaataggcaacctgcggaaacttgggttcttggccttgaattcaaacaagtttagtggtggaataccgtcttcgattggcgtactcacaaacctcttatggctagacctggctgataatcaactcactggatctgtccccatctcaacatcaacatcaccaggcctggaccaacttgtcaaaacgcagcacttccatttcaacaagaaccagttaactggaacgcttactggacttttcaactccaatatgactctcatacacattttgtttgatagcaacaaattctcaggctcaatcccagctgaggttgggactgttagtacacttgaagttctccgattggataggaatggttttacgggagcaatacctgctacaattggcagtttggtcaaactgaatgagctgaacttagcaaacaacaagctaactggatcagtgccagatctcagcaacatgaccaacttgaatgttgtggatttgagcaacaacacatttgatccttcagtggcccccagctggttcacatctttaacatctcttgcttctgtttcaatagtttctggaagtctttctggccaggtcccaaaggggctcttcacattgcccacactgcagcaagttgtgctgagcaacaaccaattcaacgggacacttgaaattacaggcaacatcagcagctcactgcagacagtaaatctcatggacaaccgaatagtttctaccgatactgcaagctacaagaaaactctgctcctggcaggtaatccgttttgtgccgagcaagatcccaacaacagagccttctgcagcaggcagctacagaacgcgagcccatacagtaccagtatggaaaaatgcggctcagctcagtgcagtgatggtcagaacgtgaaccctgcaagctgcggctgtgctttctcatacaacggcaagatggttttcagggcacccttcttcgtcgacttggtgagcagtacaccgttccagctgctggagtcgaccatggcggcaaagctgaacctgctccctggctcagtcgctctctcagacatccacttcaacagtgacaactacctccaagttcaagtgaagctgttcccaacatccggggtgaccttcaacctgtcagaattgacaaggattggttcttctctcagtaaccagatttacaaaccaccagcaaattttggaccttatttcttcattgcagacccatatgcccccttggcagttgctcttggtggcaaaaaatccaagatgagcacaggtgccatagctggaattgcagtagccggtggggtccttgttatcgccctcattttcatgtcattgtttgctctccgacagaagagaagggctaaggaactcaaggaaagagcagacccttttgcttcatgggctgctggccagaaggacagtggaggggctccacagctgaagggagcaaggttcttctcctttgacgagctcaagatctgcaccaacaacttctctgacaaccacgagatcgggtcaggaggctacgggaaggtgtacagagggattctcggtgacggaacctgtgtcgccatcaagcgtgcagaccgcaactcaatgcagggcgctgtggagttcaagaacgagatcgagctgctgtccagggtgcaccaccgcaacctggtcagcctcattggcttctgctacgagcaaggtgaacagatgctcgtctacgagtacatctccaatggcacactcagagagaacttgacggtaaatatgggctacctggacccggagtactacatgacgcagcagctgtcggagaagagcgacgtgtacagcttcggggtggtgatgctggagctggtgagcgggaggcagccgatcgagaaggggcggtacgtagtgcgggaggtgcggctggccatcgacccggccgaccacgaccaccactacggcctccgcgggatcgtcgacccggccatccgcgacgcggcgcgcacccccgtgttccggcggttcgtgcagctggcgatgcggtgcgtcgacgagtcggcggcggcgcgcccggccatgggcgccgtggtgaaggagatcgaggccatgctgcagaacgagcccgacgacgccggcgccggggagggggacagctccgccgacccgtccgccaacgagttcgaccgctaccgcggcggcggcggcggcggtggcccgccggcgcacccctacagcgacgtggagatcagccggggatcgtacgccggcgacggcgcgtcggattacatgccctatttcgaggtcaagcccaagtag

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Protein seq

MEPRVLMALALVVVAAGVPAVLCQTNAQDAAALEGLKSQWTNYPLSWNSGDPCGGGWDGIMCTNGRVTTLRLSSVSLQGTLSSSIGQLGQLTYLDLSFNINLGGPLPAEIGNLGELTTLILAGCSFTGNIPIAIGNLRKLGFLALNSNKFSGGIPSSIGVLTNLLWLDLADNQLTGSVPISTSTSPGLDQLVKTQHFHFNKNQLTGTLTGLFNSNMTLIHILFDSNKFSGSIPAEVGTVSTLEVLRLDRNGFTGAIPATIGSLVKLNELNLANNKLTGSVPDLSNMTNLNVVDLSNNTFDPSVAPSWFTSLTSLASVSIVSGSLSGQVPKGLFTLPTLQQVVLSNNQFNGTLEITGNISSSLQTVNLMDNRIVSTDTASYKKTLLLAGNPFCAEQDPNNRAFCSRQLQNASPYSTSMEKCGSAQCSDGQNVNPASCGCAFSYNGKMVFRAPFFVDLVSSTPFQLLESTMAAKLNLLPGSVALSDIHFNSDNYLQVQVKLFPTSGVTFNLSELTRIGSSLSNQIYKPPANFGPYFFIADPYAPLAVALGGKKSKMSTGAIAGIAVAGGVLVIALIFMSLFALRQKRRAKELKERADPFASWAAGQKDSGGAPQLKGARFFSFDELKICTNNFSDNHEIGSGGYGKVYRGILGDGTCVAIKRADRNSMQGAVEFKNEIELLSRVHHRNLVSLIGFCYEQGEQMLVYEYISNGTLRENLTVNMGYLDPEYYMTQQLSEKSDVYSFGVVMLELVSGRQPIEKGRYVVREVRLAIDPADHDHHYGLRGIVDPAIRDAARTPVFRRFVQLAMRCVDESAAARPAMGAVVKEIEAMLQNEPDDAGAGEGDSSADPSANEFDRYRGGGGGGGPPAHPYSDVEISRGSYAGDGASDYMPYFEVKPK

Function Probable leucine-rich repeat receptor-like protein kinase At5g49770 [UniProtKB/Swiss-Prot:Q9LT96]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_05g0021420 OsPr106_05g0021420.01 Chr05 24860620 24866318 - NAM
CDS seq

atggagccgcgggtgttgatggcgcttgcgctggtggtggtggcggcgggcgtgccggcggtgttgtgccagaccaacgcccaggacgctgcggcgctcgaggggctgaagagccaatggacgaactacccgttgagctggaactccggcgacccctgcggcggcggatgggacggcatcatgtgcaccaacggcagggtgacgacgctgaggctgtcaagcgtcagcctgcagggaacactgagcagcagcatcggccagctcggccagctcacgtacctggatctttccttcaacatcaatctcggtggtccgctgccagctgagattgggaaccttggggagcttacgacactgatcttagctggttgcagcttcactggaaacattccaatagcaataggcaacctgcggaaacttgggttcttggccttgaattcaaacaagtttagtggtggaataccgtcttcgattggcgtactcacaaacctcttatggctagacctggctgataatcaactcactggatctgtccccatctcaacatcaacatcaccaggcctggaccaacttgtcaaaacgcagcacttccatttcaacaagaaccagttaactggaacgcttactggacttttcaactccaatatgactctcatacacattttgtttgatagcaacaaattctcaggctcaatcccagctgaggttgggactgttagtacacttgaagttctccgattggataggaatggttttacgggagcaatacctgctacaattggcagtttggtcaaactgaatgagctgaacttagcaaacaacaagctaactggatcagtgccagatctcagcaacatgaccaacttgaatgttgtggatttgagcaacaacacatttgatccttcagtggcccccagctggttcacatctttaacatctcttgcttctgtttcaatagtttctggaagtctttctggccaggtcccaaaggggctcttcacattgcccacactgcagcaagttgtgctgagcaacaaccaattcaacgggacacttgaaattacaggcaacatcagcagctcactgcagacagtaaatctcatggacaaccgaatagtttctaccgatactgcaagctacaagaaaactctgctcctggcaggtaatccgttttgtgccgagcaagatcccaacaacagagccttctgcagcaggcagctacagaacgcgagcccatacagtaccagtatggaaaaatgcggctcagctcagtgcagtgatggtcagaacgtgaaccctgcaagctgcggctgtgctttctcatacaacggcaagatggttttcagggcacccttcttcgtcgacttggtgagcagtacaccgttccagctgctggagtcgaccatggcggcaaagctgaacctgctccctggctcagtcgctctctcagacatccacttcaacagtgacaactacctccaagttcaagtgaagctgttcccaacatccggggtgaccttcaacctgtcagaattgacaaggattggttcttctctcagtaaccagatttacaaaccaccagcaaattttggaccttatttcttcattgcagacccatatgcccccttggcagttgctcttggtggcaaaaaatccaagatgagcacaggtgccatagctggaattgcagtagccggtggggtccttgttatcgccctcattttcatgtcattgtttgctctccgacagaagagaagggctaaggaactcaaggaaagagcagacccttttgcttcatgggctgctggccagaaggacagtggaggggctccacagctgaagggagcaaggttcttctcctttgacgagctcaagatctgcaccaacaacttctctgacaaccacgagatcgggtcaggaggctacgggaaggtgtacagagggattctcggtgacggaacctgtgtcgccatcaagcgtgcagaccgcaactcaatgcagggcgctgtggagttcaagaacgagatcgagctgctgtccagggtgcaccaccgcaacctggtcagcctcattggcttctgctacgagcaaggtgaacagatgctcgtctacgagtacatctccaatggcacactcagagagaacttgacggtaaatatgggctacctggacccggagtactacatgacgcagcagctgtcggagaagagcgacgtgtacagcttcggggtggtgatgctggagctggtgagcgggaggcagccgatcgagaaggggcggtacgtagtgcgggaggtgcggctggccatcgacccggccgaccacgaccaccactacggcctccgcgggatcgtcgacccggccatccgcgacgcggcgcgcacccccgtgttccggcggttcgtgcagctggcgatgcggtgcgtcgacgagtcggcggcggcgcgcccggccatgggcgccgtggtgaaggagatcgaggccatgctgcagaacgagcccgacgacgccggcgccggggagggggacagctccgccgacccgtccgccaacgagttcgaccgctaccgcggcggcggcggcggcggtggcccgccggcgcacccctacagcgacgtggagatcagccggggatcgtacgccggcgacggcgcgtcggattacatgccctatttcgaggtcaagcccaagtag

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Protein seq

MEPRVLMALALVVVAAGVPAVLCQTNAQDAAALEGLKSQWTNYPLSWNSGDPCGGGWDGIMCTNGRVTTLRLSSVSLQGTLSSSIGQLGQLTYLDLSFNINLGGPLPAEIGNLGELTTLILAGCSFTGNIPIAIGNLRKLGFLALNSNKFSGGIPSSIGVLTNLLWLDLADNQLTGSVPISTSTSPGLDQLVKTQHFHFNKNQLTGTLTGLFNSNMTLIHILFDSNKFSGSIPAEVGTVSTLEVLRLDRNGFTGAIPATIGSLVKLNELNLANNKLTGSVPDLSNMTNLNVVDLSNNTFDPSVAPSWFTSLTSLASVSIVSGSLSGQVPKGLFTLPTLQQVVLSNNQFNGTLEITGNISSSLQTVNLMDNRIVSTDTASYKKTLLLAGNPFCAEQDPNNRAFCSRQLQNASPYSTSMEKCGSAQCSDGQNVNPASCGCAFSYNGKMVFRAPFFVDLVSSTPFQLLESTMAAKLNLLPGSVALSDIHFNSDNYLQVQVKLFPTSGVTFNLSELTRIGSSLSNQIYKPPANFGPYFFIADPYAPLAVALGGKKSKMSTGAIAGIAVAGGVLVIALIFMSLFALRQKRRAKELKERADPFASWAAGQKDSGGAPQLKGARFFSFDELKICTNNFSDNHEIGSGGYGKVYRGILGDGTCVAIKRADRNSMQGAVEFKNEIELLSRVHHRNLVSLIGFCYEQGEQMLVYEYISNGTLRENLTVNMGYLDPEYYMTQQLSEKSDVYSFGVVMLELVSGRQPIEKGRYVVREVRLAIDPADHDHHYGLRGIVDPAIRDAARTPVFRRFVQLAMRCVDESAAARPAMGAVVKEIEAMLQNEPDDAGAGEGDSSADPSANEFDRYRGGGGGGGPPAHPYSDVEISRGSYAGDGASDYMPYFEVKPK

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 1.701580 18.854773 9.007953

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0486100 RBH 0.428003 0.095399 1.781093
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g40770 RBH 0.396130 0.054266 0.460232
Nipponbare | IRGSP 1.0 | RAP-db Os05g0486100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0021430 RBH 0.055532 38.913666 3.065746
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0021390 RBH 0.000000 11.729213 1.439806
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0021300 RBH 1.162102 28.787960 2.943667
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0021320 RBH 0.083368 0.441018 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0036980 SBH 1.038489 4.485000 1.306294
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0370000 RBH 1.856281 46.919216 1.8363005
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0020960 RBH 0.442782 2.983289 0.948644
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0379400 SBH 1.9579205 50.49185 3.83621
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0021280 RBH 0.045067 0.581331 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0021190 RBH 0.127866 14.464831 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0021310 RBH 0.0 26.197977 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0021370 RBH 0.264251 4.088369 0.789199
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0021350 RBH 0.597492 22.930204 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G020810 RBH 0.231811 6.945503 0.572508
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0021230 RBH 1.507296 64.602875 1.936974
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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